Gene annotation
Transcriptome id Sobic.001G164500.1
Synonym KAN3
Functional annotation MYB family transcription factor, putative, expressed
UniProt C5WS76
Pfam PF00249
Panther DB PTHR31496:SF8 PTHR31496
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G42630 : Homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os03g55760.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a007389
Brachypodium KQK14134
Barley HORVU4Hr1G012040.9 , HORVU4Hr1G012040.8 , HORVU4Hr1G012040.1 , HORVU4Hr1G012040.3 , HORVU4Hr1G012040.2 , HORVU4Hr1G012040.5 , HORVU4Hr1G012040.4 , HORVU4Hr1G012040.7 , HORVU4Hr1G012040.10 , HORVU4Hr1G012040.6
Wheat TraesCS4D02G071300 , TraesCS4D02G071300 , TraesCS4A02G242600 , TraesCS4B02G072500 , TraesCS4B02G072500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G379100 basic helix-loop-helix domain containing protein, expressed -
2 Sobic.006G233600 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
3 Sobic.010G096200 expressed protein -
4 Sobic.002G280500 GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.003G148400 Pectinesterase 1 (Precursor)(PubMedID : 26186930)@pectinesterase, putative, expressed K01051: pectinesterase
6 Sobic.004G109000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chalcone isomerase 3, putative, expressed -
7 Sobic.001G478100 aspartic proteinase nepenthesin precursor, putative, expressed -
8 Sobic.003G333700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cysteine synthase, chloroplast precursor, putative, expressed K01738: cysteine synthase
9 Sobic.006G238100 LTPL126 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.005G212400 Leucine Rich Repeat family protein, expressed -
11 Sobic.010G124200 expressed protein -
12 Sobic.006G172700 LTPL122 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.006G001400 Leucine Rich Repeat family protein, expressed -
14 Sobic.009G059100 Cupin domain containing protein, expressed -
15 Sobic.005G200600 dirigent, putative, expressed -
16 Sobic.002G415400 - -
17 Sobic.002G415300 - -
18 Sobic.007G015700 expressed protein -
19 Sobic.003G068300 transferase family protein, putative, expressed -
20 Sobic.004G060700 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase


Gene co-expression network
sample Sobic001G164500 Sobic001G164500 Sobic001G379100 Sobic001G379100 Sobic001G164500--Sobic001G379100 Sobic006G233600 Sobic006G233600 Sobic001G164500--Sobic006G233600 Sobic010G096200 Sobic010G096200 Sobic001G164500--Sobic010G096200 Sobic002G280500 Sobic002G280500 Sobic001G164500--Sobic002G280500 Sobic003G148400 Sobic003G148400 Sobic001G164500--Sobic003G148400 Sobic004G109000 Sobic004G109000 Sobic001G164500--Sobic004G109000 Sobic001G478100 Sobic001G478100 Sobic001G164500--Sobic001G478100 Sobic003G333700 Sobic003G333700 Sobic001G164500--Sobic003G333700 Sobic006G238100 Sobic006G238100 Sobic001G164500--Sobic006G238100 Sobic001G379100--Sobic001G164500 Sobic001G379100--Sobic010G096200 Sobic001G379100--Sobic003G148400 Sobic001G379100--Sobic002G280500 Sobic001G127700 Sobic001G127700 Sobic001G379100--Sobic001G127700 Sobic006G172700 Sobic006G172700 Sobic001G379100--Sobic006G172700 Sobic002G225000 Sobic002G225000 Sobic001G379100--Sobic002G225000 Sobic004G060700 Sobic004G060700 Sobic001G379100--Sobic004G060700 Sobic001G379100--Sobic004G109000 Sobic005G196500 Sobic005G196500 Sobic006G233600--Sobic005G196500 Sobic010G107200 Sobic010G107200 Sobic006G233600--Sobic010G107200 Sobic006G233600--Sobic001G478100 Sobic005G209900 Sobic005G209900 Sobic006G233600--Sobic005G209900 Sobic006G032800 Sobic006G032800 Sobic006G233600--Sobic006G032800 Sobic006G001400 Sobic006G001400 Sobic006G233600--Sobic006G001400 Sobic007G142300 Sobic007G142300 Sobic006G233600--Sobic007G142300 Sobic009G154100 Sobic009G154100 Sobic006G233600--Sobic009G154100 Sobic007G012800 Sobic007G012800 Sobic006G233600--Sobic007G012800 Sobic010G096200--Sobic001G379100 Sobic005G147800 Sobic005G147800 Sobic010G096200--Sobic005G147800 Sobic001G389600 Sobic001G389600 Sobic010G096200--Sobic001G389600 Sobic010G096200--Sobic001G164500 Sobic010G096200--Sobic007G142300 Sobic010G096200--Sobic010G107200 Sobic010G165100 Sobic010G165100 Sobic010G096200--Sobic010G165100 Sobic010G096200--Sobic006G233600 Sobic002G164700 Sobic002G164700 Sobic010G096200--Sobic002G164700 Sobic006G238000 Sobic006G238000 Sobic002G280500--Sobic006G238000 Sobic004G291500 Sobic004G291500 Sobic002G280500--Sobic004G291500 Sobic008G084200 Sobic008G084200 Sobic002G280500--Sobic008G084200 Sobic002G280500--Sobic001G379100 Sobic009G059100 Sobic009G059100 Sobic002G280500--Sobic009G059100 Sobic002G025300 Sobic002G025300 Sobic002G280500--Sobic002G025300 Sobic010G124200 Sobic010G124200 Sobic002G280500--Sobic010G124200 Sobic002G280500--Sobic006G172700 Sobic004G001200 Sobic004G001200 Sobic002G280500--Sobic004G001200 Sobic003G148400--Sobic001G379100 Sobic003G250000 Sobic003G250000 Sobic003G148400--Sobic003G250000 Sobic004G253500 Sobic004G253500 Sobic003G148400--Sobic004G253500 Sobic003G148400--Sobic001G164500 Sobic003G148400--Sobic010G096200 Sobic003G148400--Sobic002G225000 Sobic003G259500 Sobic003G259500 Sobic003G148400--Sobic003G259500 Sobic009G002900 Sobic009G002900 Sobic003G148400--Sobic009G002900 Sobic008G075200 Sobic008G075200 Sobic003G148400--Sobic008G075200 Sobic001G188600 Sobic001G188600 Sobic004G109000--Sobic001G188600 Sobic007G211100 Sobic007G211100 Sobic004G109000--Sobic007G211100 Sobic006G114300 Sobic006G114300 Sobic004G109000--Sobic006G114300 Sobic003G383500 Sobic003G383500 Sobic004G109000--Sobic003G383500 Sobic004G109000--Sobic009G059100 Sobic001G069500 Sobic001G069500 Sobic004G109000--Sobic001G069500 Sobic006G025700 Sobic006G025700 Sobic004G109000--Sobic006G025700 Sobic007G013400 Sobic007G013400 Sobic004G109000--Sobic007G013400 Sobic001G215300 Sobic001G215300 Sobic004G109000--Sobic001G215300 Sobic001G478100--Sobic001G389600 Sobic001G478100--Sobic006G233600 Sobic001G478100--Sobic010G107200 Sobic002G403000 Sobic002G403000 Sobic001G478100--Sobic002G403000 Sobic010G143300 Sobic010G143300 Sobic001G478100--Sobic010G143300 Sobic001G478100--Sobic006G032800 Sobic001G478100--Sobic005G196500 Sobic001G478100--Sobic007G142300 Sobic001G478100--Sobic010G165100 Sobic002G078000 Sobic002G078000 Sobic003G333700--Sobic002G078000 Sobic003G223000 Sobic003G223000 Sobic003G333700--Sobic003G223000 Sobic001G013900 Sobic001G013900 Sobic003G333700--Sobic001G013900 Sobic001G104300 Sobic001G104300 Sobic003G333700--Sobic001G104300 Sobic003G333700--Sobic004G109000 Sobic003G333700--Sobic001G164500 Sobic001G165801 Sobic001G165801 Sobic003G333700--Sobic001G165801 Sobic003G333700--Sobic001G188600 Sobic003G333700--Sobic001G379100 Sobic001G379300 Sobic001G379300 Sobic006G238100--Sobic001G379300 Sobic002G416950 Sobic002G416950 Sobic006G238100--Sobic002G416950 Sobic006G238100--Sobic004G060700 Sobic001G255300 Sobic001G255300 Sobic006G238100--Sobic001G255300 Sobic005G200600 Sobic005G200600 Sobic006G238100--Sobic005G200600 Sobic007G009600 Sobic007G009600 Sobic006G238100--Sobic007G009600 Sobic002G415300 Sobic002G415300 Sobic006G238100--Sobic002G415300 Sobic008G163200 Sobic008G163200 Sobic006G238100--Sobic008G163200 Sobic002G415400 Sobic002G415400 Sobic006G238100--Sobic002G415400
Octagon: transcription factors


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