Gene annotation
Transcriptome id Sobic.001G379100.1
Synonym Sb01g035970
Functional annotation basic helix-loop-helix domain containing protein, expressed
UniProt C5X0R6
Pfam -
Panther DB PTHR31945 PTHR31945:SF18
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G40435 : -
RAP-DB (Rice) LOC_Os03g21970.1 : basic helix-loop-helix domain containing protein, expressed
MaizeGDB (Corn) Zm00025a002371 , Zm00025a052415
Brachypodium KQK21778
Barley -
Wheat TraesCS4B02G167700 , TraesCS4D02G170400 , TraesCS4A02G136800 , TraesCS4A02G136800
Populus -


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cDNA sequences
Sobic.001G379100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G164500 MYB family transcription factor, putative, expressed -
2 Sobic.010G096200 expressed protein -
3 Sobic.003G148400 Pectinesterase 1 (Precursor)(PubMedID : 26186930)@pectinesterase, putative, expressed K01051: pectinesterase
4 Sobic.002G280500 GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.001G127700 possible lysine decarboxylase domain containing protein, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
6 Sobic.006G172700 LTPL122 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.002G225000 remorin C-terminal domain containing protein, putative, expressed -
8 Sobic.004G060700 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
9 Sobic.004G109000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chalcone isomerase 3, putative, expressed -
10 Sobic.005G212400 Leucine Rich Repeat family protein, expressed -
11 Sobic.007G009600 expressed protein -
12 Sobic.002G416950 - -
13 Sobic.006G238100 LTPL126 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.006G038850 - -
15 Sobic.001G478100 aspartic proteinase nepenthesin precursor, putative, expressed -
16 Sobic.002G415300 - -
17 Sobic.004G263000 expressed protein -
18 Sobic.003G333700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cysteine synthase, chloroplast precursor, putative, expressed K01738: cysteine synthase
19 Sobic.001G435600 - -
20 Sobic.008G123600 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase


Gene co-expression network
sample Sobic001G379100 Sobic001G379100 Sobic001G164500 Sobic001G164500 Sobic001G379100--Sobic001G164500 Sobic010G096200 Sobic010G096200 Sobic001G379100--Sobic010G096200 Sobic003G148400 Sobic003G148400 Sobic001G379100--Sobic003G148400 Sobic002G280500 Sobic002G280500 Sobic001G379100--Sobic002G280500 Sobic001G127700 Sobic001G127700 Sobic001G379100--Sobic001G127700 Sobic006G172700 Sobic006G172700 Sobic001G379100--Sobic006G172700 Sobic002G225000 Sobic002G225000 Sobic001G379100--Sobic002G225000 Sobic004G060700 Sobic004G060700 Sobic001G379100--Sobic004G060700 Sobic004G109000 Sobic004G109000 Sobic001G379100--Sobic004G109000 Sobic001G164500--Sobic001G379100 Sobic006G233600 Sobic006G233600 Sobic001G164500--Sobic006G233600 Sobic001G164500--Sobic010G096200 Sobic001G164500--Sobic002G280500 Sobic001G164500--Sobic003G148400 Sobic001G164500--Sobic004G109000 Sobic001G478100 Sobic001G478100 Sobic001G164500--Sobic001G478100 Sobic003G333700 Sobic003G333700 Sobic001G164500--Sobic003G333700 Sobic006G238100 Sobic006G238100 Sobic001G164500--Sobic006G238100 Sobic010G096200--Sobic001G379100 Sobic005G147800 Sobic005G147800 Sobic010G096200--Sobic005G147800 Sobic001G389600 Sobic001G389600 Sobic010G096200--Sobic001G389600 Sobic010G096200--Sobic001G164500 Sobic007G142300 Sobic007G142300 Sobic010G096200--Sobic007G142300 Sobic010G107200 Sobic010G107200 Sobic010G096200--Sobic010G107200 Sobic010G165100 Sobic010G165100 Sobic010G096200--Sobic010G165100 Sobic010G096200--Sobic006G233600 Sobic002G164700 Sobic002G164700 Sobic010G096200--Sobic002G164700 Sobic003G148400--Sobic001G379100 Sobic003G250000 Sobic003G250000 Sobic003G148400--Sobic003G250000 Sobic004G253500 Sobic004G253500 Sobic003G148400--Sobic004G253500 Sobic003G148400--Sobic001G164500 Sobic003G148400--Sobic010G096200 Sobic003G148400--Sobic002G225000 Sobic003G259500 Sobic003G259500 Sobic003G148400--Sobic003G259500 Sobic009G002900 Sobic009G002900 Sobic003G148400--Sobic009G002900 Sobic008G075200 Sobic008G075200 Sobic003G148400--Sobic008G075200 Sobic006G238000 Sobic006G238000 Sobic002G280500--Sobic006G238000 Sobic004G291500 Sobic004G291500 Sobic002G280500--Sobic004G291500 Sobic008G084200 Sobic008G084200 Sobic002G280500--Sobic008G084200 Sobic002G280500--Sobic001G379100 Sobic009G059100 Sobic009G059100 Sobic002G280500--Sobic009G059100 Sobic002G025300 Sobic002G025300 Sobic002G280500--Sobic002G025300 Sobic010G124200 Sobic010G124200 Sobic002G280500--Sobic010G124200 Sobic002G280500--Sobic006G172700 Sobic004G001200 Sobic004G001200 Sobic002G280500--Sobic004G001200 Sobic001G127700--Sobic006G172700 Sobic009G115050 Sobic009G115050 Sobic001G127700--Sobic009G115050 Sobic005G212400 Sobic005G212400 Sobic001G127700--Sobic005G212400 Sobic001G127700--Sobic004G060700 Sobic001G003600 Sobic001G003600 Sobic001G127700--Sobic001G003600 Sobic001G435600 Sobic001G435600 Sobic001G127700--Sobic001G435600 Sobic007G170800 Sobic007G170800 Sobic001G127700--Sobic007G170800 Sobic002G329500 Sobic002G329500 Sobic001G127700--Sobic002G329500 Sobic002G415400 Sobic002G415400 Sobic001G127700--Sobic002G415400 Sobic006G172700--Sobic001G003600 Sobic006G172700--Sobic009G059100 Sobic002G020100 Sobic002G020100 Sobic006G172700--Sobic002G020100 Sobic006G172700--Sobic001G127700 Sobic005G056201 Sobic005G056201 Sobic006G172700--Sobic005G056201 Sobic004G076000 Sobic004G076000 Sobic006G172700--Sobic004G076000 Sobic006G172700--Sobic009G115050 Sobic006G172700--Sobic004G060700 Sobic003G096100 Sobic003G096100 Sobic006G172700--Sobic003G096100 Sobic009G231100 Sobic009G231100 Sobic002G225000--Sobic009G231100 Sobic003G078300 Sobic003G078300 Sobic002G225000--Sobic003G078300 Sobic002G377300 Sobic002G377300 Sobic002G225000--Sobic002G377300 Sobic002G225000--Sobic001G379100 Sobic002G225000--Sobic010G165100 Sobic002G225000--Sobic003G148400 Sobic003G223000 Sobic003G223000 Sobic002G225000--Sobic003G223000 Sobic002G388600 Sobic002G388600 Sobic002G225000--Sobic002G388600 Sobic002G078000 Sobic002G078000 Sobic002G225000--Sobic002G078000 Sobic002G416950 Sobic002G416950 Sobic004G060700--Sobic002G416950 Sobic002G415300 Sobic002G415300 Sobic004G060700--Sobic002G415300 Sobic004G060700--Sobic007G170800 Sobic007G009600 Sobic007G009600 Sobic004G060700--Sobic007G009600 Sobic008G163200 Sobic008G163200 Sobic004G060700--Sobic008G163200 Sobic004G060700--Sobic002G415400 Sobic004G060700--Sobic001G435600 Sobic004G060700--Sobic006G238100 Sobic001G379300 Sobic001G379300 Sobic004G060700--Sobic001G379300 Sobic001G188600 Sobic001G188600 Sobic004G109000--Sobic001G188600 Sobic007G211100 Sobic007G211100 Sobic004G109000--Sobic007G211100 Sobic006G114300 Sobic006G114300 Sobic004G109000--Sobic006G114300 Sobic003G383500 Sobic003G383500 Sobic004G109000--Sobic003G383500 Sobic004G109000--Sobic009G059100 Sobic001G069500 Sobic001G069500 Sobic004G109000--Sobic001G069500 Sobic006G025700 Sobic006G025700 Sobic004G109000--Sobic006G025700 Sobic007G013400 Sobic007G013400 Sobic004G109000--Sobic007G013400 Sobic001G215300 Sobic001G215300 Sobic004G109000--Sobic001G215300
Octagon: transcription factors


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