Gene annotation
Transcriptome id Sobic.002G272400.1
Synonym Sb02g030610
Functional annotation expressed protein
UniProt A0A1B6QDQ1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os09g35980.2 : expressed protein
MaizeGDB (Corn) Zm00025a014405
Brachypodium KQJ91143 , PNT66631 , KQJ95076
Barley -
Wheat TraesCS5A02G316400 , TraesCS5A02G316400 , TraesCS5D02G322600 , TraesCS5B02G316900
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G141900 -(PubMedID : 26976818)@Citrate transporter protein, putative, expressed -
2 Sobic.001G013900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, expressed -
3 Sobic.008G101900 plastid division regulator MinE, putative, expressed -
4 Sobic.003G223000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
5 Sobic.008G058000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dynamin family protein, putative, expressed -
6 Sobic.001G371700 zinc finger protein, putative, expressed -
7 Sobic.004G119400 ATP-binding domain-containing protein, putative, expressed -
8 Sobic.001G315400 expressed protein -
9 Sobic.010G157700 expressed protein -
10 Sobic.005G078200 OsFBX400 - F-box domain containing protein, expressed -
11 Sobic.002G078000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KHG/KDPG aldolase, putative, expressed -
12 Sobic.006G274100 ribosome biogenesis regulatory protein, putative, expressed K14852: regulator of ribosome biosynthesis
13 Sobic.003G311600 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
14 Sobic.001G321400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCB2, putative, expressed -
15 Sobic.001G104300 differentiation protein, putative, expressed K09761: 16S rRNA (uracil1498-N3)-methyltransferase
16 Sobic.008G088842 - -
17 Sobic.006G208400 expressed protein K14318: nuclear pore complex protein Nup88
18 Sobic.010G099300 - K03501: gidB, 16S rRNA (guanine527-N7)-methyltransferase
19 Sobic.002G140000 tRNA synthetase class II core domain containing protein, expressed K01892: HARS, histidyl-tRNA synthetase
20 Sobic.003G333700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cysteine synthase, chloroplast precursor, putative, expressed K01738: cysteine synthase


Gene co-expression network
sample Sobic002G272400 Sobic002G272400 Sobic002G141900 Sobic002G141900 Sobic002G272400--Sobic002G141900 Sobic001G013900 Sobic001G013900 Sobic002G272400--Sobic001G013900 Sobic008G101900 Sobic008G101900 Sobic002G272400--Sobic008G101900 Sobic003G223000 Sobic003G223000 Sobic002G272400--Sobic003G223000 Sobic008G058000 Sobic008G058000 Sobic002G272400--Sobic008G058000 Sobic001G371700 Sobic001G371700 Sobic002G272400--Sobic001G371700 Sobic004G119400 Sobic004G119400 Sobic002G272400--Sobic004G119400 Sobic001G315400 Sobic001G315400 Sobic002G272400--Sobic001G315400 Sobic010G157700 Sobic010G157700 Sobic002G272400--Sobic010G157700 Sobic002G141900--Sobic002G272400 Sobic006G281066 Sobic006G281066 Sobic002G141900--Sobic006G281066 Sobic003G267000 Sobic003G267000 Sobic002G141900--Sobic003G267000 Sobic010G027200 Sobic010G027200 Sobic002G141900--Sobic010G027200 Sobic003G165800 Sobic003G165800 Sobic002G141900--Sobic003G165800 Sobic006G208400 Sobic006G208400 Sobic002G141900--Sobic006G208400 Sobic001G104300 Sobic001G104300 Sobic002G141900--Sobic001G104300 Sobic002G140000 Sobic002G140000 Sobic002G141900--Sobic002G140000 Sobic001G027100 Sobic001G027100 Sobic002G141900--Sobic001G027100 Sobic002G360200 Sobic002G360200 Sobic001G013900--Sobic002G360200 Sobic002G078000 Sobic002G078000 Sobic001G013900--Sobic002G078000 Sobic003G333700 Sobic003G333700 Sobic001G013900--Sobic003G333700 Sobic001G013900--Sobic002G272400 Sobic001G013900--Sobic001G104300 Sobic001G188600 Sobic001G188600 Sobic001G013900--Sobic001G188600 Sobic001G172300 Sobic001G172300 Sobic001G013900--Sobic001G172300 Sobic004G338300 Sobic004G338300 Sobic001G013900--Sobic004G338300 Sobic001G013900--Sobic008G058000 Sobic006G274100 Sobic006G274100 Sobic008G101900--Sobic006G274100 Sobic008G101900--Sobic008G058000 Sobic008G101900--Sobic003G223000 Sobic006G193500 Sobic006G193500 Sobic008G101900--Sobic006G193500 Sobic008G101900--Sobic001G371700 Sobic001G395200 Sobic001G395200 Sobic008G101900--Sobic001G395200 Sobic001G199500 Sobic001G199500 Sobic008G101900--Sobic001G199500 Sobic008G101900--Sobic002G272400 Sobic004G354000 Sobic004G354000 Sobic008G101900--Sobic004G354000 Sobic003G223000--Sobic003G333700 Sobic003G223000--Sobic002G078000 Sobic003G223000--Sobic008G101900 Sobic009G002900 Sobic009G002900 Sobic003G223000--Sobic009G002900 Sobic009G177200 Sobic009G177200 Sobic003G223000--Sobic009G177200 Sobic009G231100 Sobic009G231100 Sobic003G223000--Sobic009G231100 Sobic001G165801 Sobic001G165801 Sobic003G223000--Sobic001G165801 Sobic003G223000--Sobic001G104300 Sobic003G223000--Sobic002G272400 Sobic008G058000--Sobic008G101900 Sobic008G058000--Sobic001G013900 Sobic008G058000--Sobic002G272400 Sobic008G058000--Sobic001G371700 Sobic008G058000--Sobic003G223000 Sobic010G099300 Sobic010G099300 Sobic008G058000--Sobic010G099300 Sobic008G058000--Sobic002G078000 Sobic008G058000--Sobic006G193500 Sobic008G125100 Sobic008G125100 Sobic008G058000--Sobic008G125100 Sobic002G377300 Sobic002G377300 Sobic001G371700--Sobic002G377300 Sobic004G118800 Sobic004G118800 Sobic001G371700--Sobic004G118800 Sobic003G078300 Sobic003G078300 Sobic001G371700--Sobic003G078300 Sobic001G371700--Sobic008G101900 Sobic006G257200 Sobic006G257200 Sobic001G371700--Sobic006G257200 Sobic001G047200 Sobic001G047200 Sobic001G371700--Sobic001G047200 Sobic001G371700--Sobic002G272400 Sobic002G311000 Sobic002G311000 Sobic001G371700--Sobic002G311000 Sobic001G371700--Sobic003G223000 Sobic008G017100 Sobic008G017100 Sobic004G119400--Sobic008G017100 Sobic010G224700 Sobic010G224700 Sobic004G119400--Sobic010G224700 Sobic006G269800 Sobic006G269800 Sobic004G119400--Sobic006G269800 Sobic007G094500 Sobic007G094500 Sobic004G119400--Sobic007G094500 Sobic002G380100 Sobic002G380100 Sobic004G119400--Sobic002G380100 Sobic001G429600 Sobic001G429600 Sobic004G119400--Sobic001G429600 Sobic002G309200 Sobic002G309200 Sobic004G119400--Sobic002G309200 Sobic003G070100 Sobic003G070100 Sobic004G119400--Sobic003G070100 Sobic001G540800 Sobic001G540800 Sobic004G119400--Sobic001G540800 Sobic001G367100 Sobic001G367100 Sobic001G315400--Sobic001G367100 Sobic003G077500 Sobic003G077500 Sobic001G315400--Sobic003G077500 Sobic002G079100 Sobic002G079100 Sobic001G315400--Sobic002G079100 Sobic002G002100 Sobic002G002100 Sobic001G315400--Sobic002G002100 Sobic005G047300 Sobic005G047300 Sobic001G315400--Sobic005G047300 Sobic002G223300 Sobic002G223300 Sobic001G315400--Sobic002G223300 Sobic004G128200 Sobic004G128200 Sobic001G315400--Sobic004G128200 Sobic004G227500 Sobic004G227500 Sobic001G315400--Sobic004G227500 Sobic001G315400--Sobic001G395200 Sobic009G096100 Sobic009G096100 Sobic010G157700--Sobic009G096100 Sobic001G236800 Sobic001G236800 Sobic010G157700--Sobic001G236800 Sobic008G100400 Sobic008G100400 Sobic010G157700--Sobic008G100400 Sobic008G186500 Sobic008G186500 Sobic010G157700--Sobic008G186500 Sobic007G182600 Sobic007G182600 Sobic010G157700--Sobic007G182600 Sobic010G157700--Sobic002G380100 Sobic007G000400 Sobic007G000400 Sobic010G157700--Sobic007G000400 Sobic010G157700--Sobic003G267000 Sobic001G321400 Sobic001G321400 Sobic010G157700--Sobic001G321400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.