Gene annotation
Transcriptome id Sobic.010G157700.2,Sobic.010G157700.1
Synonym Sb10g021040
Functional annotation expressed protein
UniProt C5Z408 , A0A1W0VTA9
Pfam -
Panther DB PTHR31755 PTHR31755:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G37920 : -
RAP-DB (Rice) LOC_Os01g20110.1 : expressed protein
MaizeGDB (Corn) Zm00025a040371
Brachypodium KQJ95607
Barley HORVU5Hr1G049810.9 , HORVU5Hr1G049810.8 , HORVU5Hr1G049810.7 , HORVU5Hr1G049810.6 , HORVU5Hr1G049810.5 , HORVU5Hr1G049810.4 , HORVU5Hr1G049810.3 , HORVU5Hr1G049810.2 , HORVU5Hr1G049810.1 , HORVU5Hr1G049810.10
Wheat TraesCS5D02G164500 , TraesCS5B02G157200 , TraesCS5A02G159400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G096100 endoribonuclease Dicer, putative, expressed -
2 Sobic.001G236800 tRNA methyltransferase, putative, expressed K00927: PGK, phosphoglycerate kinase
3 Sobic.008G100400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"SMK1(Ortholog in maize:Li et al., 2014)"(PubMedID : 31659912)@tetratricopeptide-like helical, putative, expressed -
4 Sobic.008G186500 FGGY family of carbohydrate kinases, putative, expressed K00854: xylB, xylulokinase
5 Sobic.007G182600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
6 Sobic.002G380100 PPR repeat containing protein, expressed K17964: leucine-rich PPR motif-containing protein, mitochondrial
7 Sobic.007G000400 B3 DNA binding domain containing protein, expressed -
8 Sobic.003G267000 1-aminocyclopropane-1-carboxylate deaminase, putative, expressed -
9 Sobic.001G321400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCB2, putative, expressed -
10 Sobic.001G215300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed -
11 Sobic.002G272400 expressed protein -
12 Sobic.002G141900 -(PubMedID : 26976818)@Citrate transporter protein, putative, expressed -
13 Sobic.009G148200 deoxynucleoside kinase family, putative, expressed -
14 Sobic.001G047200 carboxyl-terminal peptidase, putative, expressed -
15 Sobic.003G185250 - -
16 Sobic.004G119400 ATP-binding domain-containing protein, putative, expressed -
17 Sobic.001G061600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidase M50, mammalian sterol-regulatory element binding protein, putative, expressed -
18 Sobic.004G246800 pentatricopeptide, putative, expressed -
19 Sobic.001G532700 WD repeat-containing protein 44, putative, expressed -
20 Sobic.010G099300 - K03501: gidB, 16S rRNA (guanine527-N7)-methyltransferase


Gene co-expression network
sample Sobic010G157700 Sobic010G157700 Sobic009G096100 Sobic009G096100 Sobic010G157700--Sobic009G096100 Sobic001G236800 Sobic001G236800 Sobic010G157700--Sobic001G236800 Sobic008G100400 Sobic008G100400 Sobic010G157700--Sobic008G100400 Sobic008G186500 Sobic008G186500 Sobic010G157700--Sobic008G186500 Sobic007G182600 Sobic007G182600 Sobic010G157700--Sobic007G182600 Sobic002G380100 Sobic002G380100 Sobic010G157700--Sobic002G380100 Sobic007G000400 Sobic007G000400 Sobic010G157700--Sobic007G000400 Sobic003G267000 Sobic003G267000 Sobic010G157700--Sobic003G267000 Sobic001G321400 Sobic001G321400 Sobic010G157700--Sobic001G321400 Sobic008G056900 Sobic008G056900 Sobic009G096100--Sobic008G056900 Sobic002G192500 Sobic002G192500 Sobic009G096100--Sobic002G192500 Sobic009G096100--Sobic010G157700 Sobic001G485600 Sobic001G485600 Sobic009G096100--Sobic001G485600 Sobic006G056000 Sobic006G056000 Sobic009G096100--Sobic006G056000 Sobic007G043900 Sobic007G043900 Sobic009G096100--Sobic007G043900 Sobic002G344500 Sobic002G344500 Sobic009G096100--Sobic002G344500 Sobic009G096100--Sobic002G380100 Sobic007G077700 Sobic007G077700 Sobic009G096100--Sobic007G077700 Sobic004G015700 Sobic004G015700 Sobic001G236800--Sobic004G015700 Sobic002G064400 Sobic002G064400 Sobic001G236800--Sobic002G064400 Sobic001G142400 Sobic001G142400 Sobic001G236800--Sobic001G142400 Sobic001G215300 Sobic001G215300 Sobic001G236800--Sobic001G215300 Sobic007G206100 Sobic007G206100 Sobic001G236800--Sobic007G206100 Sobic008G008500 Sobic008G008500 Sobic001G236800--Sobic008G008500 Sobic004G151900 Sobic004G151900 Sobic001G236800--Sobic004G151900 Sobic004G246800 Sobic004G246800 Sobic001G236800--Sobic004G246800 Sobic001G236800--Sobic010G157700 Sobic008G100400--Sobic007G182600 Sobic001G040600 Sobic001G040600 Sobic008G100400--Sobic001G040600 Sobic003G336500 Sobic003G336500 Sobic008G100400--Sobic003G336500 Sobic008G100400--Sobic010G157700 Sobic008G147400 Sobic008G147400 Sobic008G100400--Sobic008G147400 Sobic008G100400--Sobic009G096100 Sobic001G081300 Sobic001G081300 Sobic008G100400--Sobic001G081300 Sobic010G099300 Sobic010G099300 Sobic008G100400--Sobic010G099300 Sobic009G148200 Sobic009G148200 Sobic008G100400--Sobic009G148200 Sobic008G186500--Sobic010G157700 Sobic008G186500--Sobic003G267000 Sobic002G141900 Sobic002G141900 Sobic008G186500--Sobic002G141900 Sobic003G165800 Sobic003G165800 Sobic008G186500--Sobic003G165800 Sobic003G420900 Sobic003G420900 Sobic008G186500--Sobic003G420900 Sobic008G186500--Sobic004G015700 Sobic008G088842 Sobic008G088842 Sobic008G186500--Sobic008G088842 Sobic010G134500 Sobic010G134500 Sobic008G186500--Sobic010G134500 Sobic008G186500--Sobic001G321400 Sobic007G182600--Sobic008G100400 Sobic007G182600--Sobic010G099300 Sobic001G061600 Sobic001G061600 Sobic007G182600--Sobic001G061600 Sobic007G182600--Sobic001G081300 Sobic007G182600--Sobic001G040600 Sobic007G182600--Sobic008G147400 Sobic003G051500 Sobic003G051500 Sobic007G182600--Sobic003G051500 Sobic010G252000 Sobic010G252000 Sobic007G182600--Sobic010G252000 Sobic007G182600--Sobic002G380100 Sobic002G079100 Sobic002G079100 Sobic002G380100--Sobic002G079100 Sobic004G119400 Sobic004G119400 Sobic002G380100--Sobic004G119400 Sobic008G017100 Sobic008G017100 Sobic002G380100--Sobic008G017100 Sobic006G111200 Sobic006G111200 Sobic002G380100--Sobic006G111200 Sobic001G448100 Sobic001G448100 Sobic002G380100--Sobic001G448100 Sobic003G185250 Sobic003G185250 Sobic002G380100--Sobic003G185250 Sobic003G070100 Sobic003G070100 Sobic002G380100--Sobic003G070100 Sobic010G050700 Sobic010G050700 Sobic002G380100--Sobic010G050700 Sobic002G380100--Sobic009G096100 Sobic007G000400--Sobic008G056900 Sobic001G522400 Sobic001G522400 Sobic007G000400--Sobic001G522400 Sobic006G242401 Sobic006G242401 Sobic007G000400--Sobic006G242401 Sobic001G045700 Sobic001G045700 Sobic007G000400--Sobic001G045700 Sobic007G000400--Sobic009G096100 Sobic007G000400--Sobic002G380100 Sobic004G128200 Sobic004G128200 Sobic007G000400--Sobic004G128200 Sobic003G163100 Sobic003G163100 Sobic007G000400--Sobic003G163100 Sobic010G143200 Sobic010G143200 Sobic007G000400--Sobic010G143200 Sobic003G267000--Sobic002G141900 Sobic004G144400 Sobic004G144400 Sobic003G267000--Sobic004G144400 Sobic003G267000--Sobic008G186500 Sobic003G267000--Sobic010G157700 Sobic003G345900 Sobic003G345900 Sobic003G267000--Sobic003G345900 Sobic010G120300 Sobic010G120300 Sobic003G267000--Sobic010G120300 Sobic004G275600 Sobic004G275600 Sobic003G267000--Sobic004G275600 Sobic008G038600 Sobic008G038600 Sobic003G267000--Sobic008G038600 Sobic006G208400 Sobic006G208400 Sobic003G267000--Sobic006G208400 Sobic002G140000 Sobic002G140000 Sobic001G321400--Sobic002G140000 Sobic010G027200 Sobic010G027200 Sobic001G321400--Sobic010G027200 Sobic006G263800 Sobic006G263800 Sobic001G321400--Sobic006G263800 Sobic007G116100 Sobic007G116100 Sobic001G321400--Sobic007G116100 Sobic004G255500 Sobic004G255500 Sobic001G321400--Sobic004G255500 Sobic006G281066 Sobic006G281066 Sobic001G321400--Sobic006G281066 Sobic006G237100 Sobic006G237100 Sobic001G321400--Sobic006G237100 Sobic007G015300 Sobic007G015300 Sobic001G321400--Sobic007G015300 Sobic001G395300 Sobic001G395300 Sobic001G321400--Sobic001G395300
Octagon: transcription factors


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