Gene annotation
Transcriptome id Sobic.008G058000.1
Synonym DRP5B, ARC5, Sb08g004890
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
dynamin family protein, putative, expressed
UniProt C5YSU4
Pfam PF00350
Panther DB PTHR11566 PTHR11566:SF78
NCBI CDD KOG0446; Vacuolar sorting protein VPS1, dynamin, and related proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G19720 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os12g07880.1 : dynamin family protein, putative, expressed
MaizeGDB (Corn) Zm00025a054069
Brachypodium PNT65354
Barley -
Wheat TraesCS5A02G114600 , TraesCS5D02G124800 , TraesCS5B02G120600 , TraesCS5B02G120600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G101900 plastid division regulator MinE, putative, expressed -
2 Sobic.001G013900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, expressed -
3 Sobic.002G272400 expressed protein -
4 Sobic.001G371700 zinc finger protein, putative, expressed -
5 Sobic.003G223000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
6 Sobic.010G099300 - K03501: gidB, 16S rRNA (guanine527-N7)-methyltransferase
7 Sobic.002G078000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KHG/KDPG aldolase, putative, expressed -
8 Sobic.006G193500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.008G125100 Mur ligase family protein, putative, expressed -
10 Sobic.004G119400 ATP-binding domain-containing protein, putative, expressed -
11 Sobic.004G118800 receptor lectin kinase like protein, putative, expressed -
12 Sobic.001G027100 FEN1A - Putative flap endonuclease protein, expressed K04799: FEN1, flap endonuclease-1
13 Sobic.009G002900 expressed protein -
14 Sobic.010G279300 phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed -
15 Sobic.006G274100 ribosome biogenesis regulatory protein, putative, expressed K14852: regulator of ribosome biosynthesis
16 Sobic.002G354700 zinc finger family protein, putative, expressed -
17 Sobic.003G333700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cysteine synthase, chloroplast precursor, putative, expressed K01738: cysteine synthase
18 Sobic.009G177200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
19 Sobic.003G259600 ORC4 - Putative origin recognition complex subunit 4, expressed K02606: origin recognition complex subunit 4
20 Sobic.010G032300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic008G058000 Sobic008G058000 Sobic008G101900 Sobic008G101900 Sobic008G058000--Sobic008G101900 Sobic001G013900 Sobic001G013900 Sobic008G058000--Sobic001G013900 Sobic002G272400 Sobic002G272400 Sobic008G058000--Sobic002G272400 Sobic001G371700 Sobic001G371700 Sobic008G058000--Sobic001G371700 Sobic003G223000 Sobic003G223000 Sobic008G058000--Sobic003G223000 Sobic010G099300 Sobic010G099300 Sobic008G058000--Sobic010G099300 Sobic002G078000 Sobic002G078000 Sobic008G058000--Sobic002G078000 Sobic006G193500 Sobic006G193500 Sobic008G058000--Sobic006G193500 Sobic008G125100 Sobic008G125100 Sobic008G058000--Sobic008G125100 Sobic006G274100 Sobic006G274100 Sobic008G101900--Sobic006G274100 Sobic008G101900--Sobic008G058000 Sobic008G101900--Sobic003G223000 Sobic008G101900--Sobic006G193500 Sobic008G101900--Sobic001G371700 Sobic001G395200 Sobic001G395200 Sobic008G101900--Sobic001G395200 Sobic001G199500 Sobic001G199500 Sobic008G101900--Sobic001G199500 Sobic008G101900--Sobic002G272400 Sobic004G354000 Sobic004G354000 Sobic008G101900--Sobic004G354000 Sobic002G360200 Sobic002G360200 Sobic001G013900--Sobic002G360200 Sobic001G013900--Sobic002G078000 Sobic003G333700 Sobic003G333700 Sobic001G013900--Sobic003G333700 Sobic001G013900--Sobic002G272400 Sobic001G104300 Sobic001G104300 Sobic001G013900--Sobic001G104300 Sobic001G188600 Sobic001G188600 Sobic001G013900--Sobic001G188600 Sobic001G172300 Sobic001G172300 Sobic001G013900--Sobic001G172300 Sobic004G338300 Sobic004G338300 Sobic001G013900--Sobic004G338300 Sobic001G013900--Sobic008G058000 Sobic002G141900 Sobic002G141900 Sobic002G272400--Sobic002G141900 Sobic002G272400--Sobic001G013900 Sobic002G272400--Sobic008G101900 Sobic002G272400--Sobic003G223000 Sobic002G272400--Sobic008G058000 Sobic002G272400--Sobic001G371700 Sobic004G119400 Sobic004G119400 Sobic002G272400--Sobic004G119400 Sobic001G315400 Sobic001G315400 Sobic002G272400--Sobic001G315400 Sobic010G157700 Sobic010G157700 Sobic002G272400--Sobic010G157700 Sobic002G377300 Sobic002G377300 Sobic001G371700--Sobic002G377300 Sobic004G118800 Sobic004G118800 Sobic001G371700--Sobic004G118800 Sobic003G078300 Sobic003G078300 Sobic001G371700--Sobic003G078300 Sobic001G371700--Sobic008G101900 Sobic006G257200 Sobic006G257200 Sobic001G371700--Sobic006G257200 Sobic001G047200 Sobic001G047200 Sobic001G371700--Sobic001G047200 Sobic001G371700--Sobic002G272400 Sobic002G311000 Sobic002G311000 Sobic001G371700--Sobic002G311000 Sobic001G371700--Sobic003G223000 Sobic003G223000--Sobic003G333700 Sobic003G223000--Sobic002G078000 Sobic003G223000--Sobic008G101900 Sobic009G002900 Sobic009G002900 Sobic003G223000--Sobic009G002900 Sobic009G177200 Sobic009G177200 Sobic003G223000--Sobic009G177200 Sobic009G231100 Sobic009G231100 Sobic003G223000--Sobic009G231100 Sobic001G165801 Sobic001G165801 Sobic003G223000--Sobic001G165801 Sobic003G223000--Sobic001G104300 Sobic003G223000--Sobic002G272400 Sobic001G040600 Sobic001G040600 Sobic010G099300--Sobic001G040600 Sobic007G182600 Sobic007G182600 Sobic010G099300--Sobic007G182600 Sobic007G060600 Sobic007G060600 Sobic010G099300--Sobic007G060600 Sobic001G081300 Sobic001G081300 Sobic010G099300--Sobic001G081300 Sobic001G437801 Sobic001G437801 Sobic010G099300--Sobic001G437801 Sobic001G049800 Sobic001G049800 Sobic010G099300--Sobic001G049800 Sobic003G051500 Sobic003G051500 Sobic010G099300--Sobic003G051500 Sobic001G395300 Sobic001G395300 Sobic010G099300--Sobic001G395300 Sobic006G271900 Sobic006G271900 Sobic010G099300--Sobic006G271900 Sobic002G078000--Sobic001G013900 Sobic002G078000--Sobic003G333700 Sobic002G078000--Sobic001G104300 Sobic005G022000 Sobic005G022000 Sobic002G078000--Sobic005G022000 Sobic002G078000--Sobic003G223000 Sobic002G078000--Sobic002G360200 Sobic002G078000--Sobic001G188600 Sobic010G012900 Sobic010G012900 Sobic002G078000--Sobic010G012900 Sobic004G109000 Sobic004G109000 Sobic002G078000--Sobic004G109000 Sobic002G155100 Sobic002G155100 Sobic006G193500--Sobic002G155100 Sobic006G193500--Sobic008G101900 Sobic006G193500--Sobic001G199500 Sobic003G102700 Sobic003G102700 Sobic006G193500--Sobic003G102700 Sobic010G141600 Sobic010G141600 Sobic006G193500--Sobic010G141600 Sobic006G193500--Sobic003G223000 Sobic005G013300 Sobic005G013300 Sobic006G193500--Sobic005G013300 Sobic006G084300 Sobic006G084300 Sobic006G193500--Sobic006G084300 Sobic001G425700 Sobic001G425700 Sobic006G193500--Sobic001G425700 Sobic009G122900 Sobic009G122900 Sobic008G125100--Sobic009G122900 Sobic008G125100--Sobic001G315400 Sobic007G000400 Sobic007G000400 Sobic008G125100--Sobic007G000400 Sobic004G128200 Sobic004G128200 Sobic008G125100--Sobic004G128200 Sobic001G236800 Sobic001G236800 Sobic008G125100--Sobic001G236800 Sobic003G304800 Sobic003G304800 Sobic008G125100--Sobic003G304800 Sobic007G172600 Sobic007G172600 Sobic008G125100--Sobic007G172600 Sobic004G178400 Sobic004G178400 Sobic008G125100--Sobic004G178400 Sobic002G380100 Sobic002G380100 Sobic008G125100--Sobic002G380100
Octagon: transcription factors


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