Gene annotation
Transcriptome id Sobic.001G467800.1,Sobic.001G467800.2
Synonym Sb01g043870
Functional annotation expressed protein
UniProt A0A1Z5SAV2 , C5WTV2
Pfam -
Panther DB PTHR33347 PTHR33347:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G33800 : -
RAP-DB (Rice) LOC_Os03g10260.1 : expressed protein
MaizeGDB (Corn) Zm00025a001179
Brachypodium PNT77969 , PNT77970 , KQK23091
Barley HORVU4Hr1G070520.6 , HORVU4Hr1G070520.7 , HORVU4Hr1G070520.4 , HORVU4Hr1G070520.5 , HORVU4Hr1G070520.2 , HORVU4Hr1G070520.3 , HORVU4Hr1G070520.8
Wheat TraesCS4D02G260700 , TraesCS4D02G260700 , TraesCS4A02G039900 , TraesCS4A02G039900 , TraesCS4B02G261100 , TraesCS4A02G039900 , TraesCS4B02G261100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G041900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
2 Sobic.004G164700 expressed protein -
3 Sobic.009G128800 expressed protein -
4 Sobic.002G006100 phytosulfokine receptor precursor, putative, expressed -
5 Sobic.003G259300 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
6 Sobic.003G351900 fasciclin-like arabinogalactan protein, putative, expressed -
7 Sobic.010G023400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
8 Sobic.004G329000 OsSCP10 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
9 Sobic.002G045200 protein kinase, putative, expressed -
10 Sobic.001G298800 ternary complex factor MIP1, putative, expressed -
11 Sobic.003G078400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic proteinase, putative, expressed -
12 Sobic.001G425700 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
13 Sobic.001G461800 zinc finger family protein, putative, expressed -
14 Sobic.010G211700 - -
15 Sobic.009G129700 serine/threonine-protein kinase, putative, expressed -
16 Sobic.008G176900 expressed protein -
17 Sobic.003G298900 1,3-beta-glucan synthase component, putative, expressed K11000: callose synthase
18 Sobic.010G096200 expressed protein -
19 Sobic.006G158800 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
20 Sobic.008G075200 2-dehydro-3-deoxyphosphooctonate aldolase, putative, expressed K01627: 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase)


Gene co-expression network
sample Sobic001G467800 Sobic001G467800 Sobic003G041900 Sobic003G041900 Sobic001G467800--Sobic003G041900 Sobic004G164700 Sobic004G164700 Sobic001G467800--Sobic004G164700 Sobic009G128800 Sobic009G128800 Sobic001G467800--Sobic009G128800 Sobic002G006100 Sobic002G006100 Sobic001G467800--Sobic002G006100 Sobic003G259300 Sobic003G259300 Sobic001G467800--Sobic003G259300 Sobic003G351900 Sobic003G351900 Sobic001G467800--Sobic003G351900 Sobic010G023400 Sobic010G023400 Sobic001G467800--Sobic010G023400 Sobic004G329000 Sobic004G329000 Sobic001G467800--Sobic004G329000 Sobic002G045200 Sobic002G045200 Sobic001G467800--Sobic002G045200 Sobic003G041900--Sobic004G164700 Sobic003G041900--Sobic010G023400 Sobic010G192500 Sobic010G192500 Sobic003G041900--Sobic010G192500 Sobic006G241800 Sobic006G241800 Sobic003G041900--Sobic006G241800 Sobic010G086000 Sobic010G086000 Sobic003G041900--Sobic010G086000 Sobic008G190000 Sobic008G190000 Sobic003G041900--Sobic008G190000 Sobic004G317200 Sobic004G317200 Sobic003G041900--Sobic004G317200 Sobic006G142500 Sobic006G142500 Sobic003G041900--Sobic006G142500 Sobic006G211900 Sobic006G211900 Sobic003G041900--Sobic006G211900 Sobic004G164700--Sobic006G241800 Sobic002G362700 Sobic002G362700 Sobic004G164700--Sobic002G362700 Sobic004G164700--Sobic008G190000 Sobic001G461800 Sobic001G461800 Sobic004G164700--Sobic001G461800 Sobic004G164700--Sobic006G142500 Sobic010G024500 Sobic010G024500 Sobic004G164700--Sobic010G024500 Sobic004G164700--Sobic003G041900 Sobic001G425700 Sobic001G425700 Sobic004G164700--Sobic001G425700 Sobic004G164700--Sobic010G086000 Sobic001G518000 Sobic001G518000 Sobic009G128800--Sobic001G518000 Sobic001G522300 Sobic001G522300 Sobic009G128800--Sobic001G522300 Sobic009G216300 Sobic009G216300 Sobic009G128800--Sobic009G216300 Sobic001G093000 Sobic001G093000 Sobic009G128800--Sobic001G093000 Sobic009G235700 Sobic009G235700 Sobic009G128800--Sobic009G235700 Sobic010G211800 Sobic010G211800 Sobic009G128800--Sobic010G211800 Sobic001G286400 Sobic001G286400 Sobic009G128800--Sobic001G286400 Sobic002G360500 Sobic002G360500 Sobic009G128800--Sobic002G360500 Sobic003G360700 Sobic003G360700 Sobic009G128800--Sobic003G360700 Sobic002G027600 Sobic002G027600 Sobic002G006100--Sobic002G027600 Sobic002G006100--Sobic003G259300 Sobic006G272800 Sobic006G272800 Sobic002G006100--Sobic006G272800 Sobic002G006100--Sobic003G351900 Sobic002G006100--Sobic001G425700 Sobic003G298900 Sobic003G298900 Sobic002G006100--Sobic003G298900 Sobic002G284100 Sobic002G284100 Sobic002G006100--Sobic002G284100 Sobic004G078500 Sobic004G078500 Sobic002G006100--Sobic004G078500 Sobic009G225500 Sobic009G225500 Sobic002G006100--Sobic009G225500 Sobic003G259300--Sobic001G425700 Sobic003G259300--Sobic009G225500 Sobic003G259300--Sobic002G006100 Sobic009G127800 Sobic009G127800 Sobic003G259300--Sobic009G127800 Sobic003G259300--Sobic006G272800 Sobic005G153000 Sobic005G153000 Sobic003G259300--Sobic005G153000 Sobic001G054700 Sobic001G054700 Sobic003G259300--Sobic001G054700 Sobic004G234500 Sobic004G234500 Sobic003G259300--Sobic004G234500 Sobic003G226700 Sobic003G226700 Sobic003G259300--Sobic003G226700 Sobic003G351900--Sobic006G142500 Sobic001G079900 Sobic001G079900 Sobic003G351900--Sobic001G079900 Sobic003G351900--Sobic002G006100 Sobic003G351900--Sobic002G027600 Sobic003G153900 Sobic003G153900 Sobic003G351900--Sobic003G153900 Sobic001G212600 Sobic001G212600 Sobic003G351900--Sobic001G212600 Sobic005G032600 Sobic005G032600 Sobic003G351900--Sobic005G032600 Sobic003G351900--Sobic004G164700 Sobic001G395200 Sobic001G395200 Sobic003G351900--Sobic001G395200 Sobic010G023400--Sobic004G234500 Sobic010G241100 Sobic010G241100 Sobic010G023400--Sobic010G241100 Sobic002G337600 Sobic002G337600 Sobic010G023400--Sobic002G337600 Sobic010G023400--Sobic010G192500 Sobic003G283900 Sobic003G283900 Sobic010G023400--Sobic003G283900 Sobic006G058000 Sobic006G058000 Sobic010G023400--Sobic006G058000 Sobic001G046400 Sobic001G046400 Sobic010G023400--Sobic001G046400 Sobic010G023400--Sobic003G041900 Sobic006G274200 Sobic006G274200 Sobic010G023400--Sobic006G274200 Sobic009G257900 Sobic009G257900 Sobic004G329000--Sobic009G257900 Sobic004G329000--Sobic003G351900 Sobic004G113900 Sobic004G113900 Sobic004G329000--Sobic004G113900 Sobic003G251700 Sobic003G251700 Sobic004G329000--Sobic003G251700 Sobic004G329000--Sobic006G142500 Sobic004G329000--Sobic004G164700 Sobic004G329000--Sobic008G190000 Sobic006G050900 Sobic006G050900 Sobic004G329000--Sobic006G050900 Sobic001G452900 Sobic001G452900 Sobic004G329000--Sobic001G452900 Sobic001G389600 Sobic001G389600 Sobic002G045200--Sobic001G389600 Sobic002G045200--Sobic010G211800 Sobic001G074100 Sobic001G074100 Sobic002G045200--Sobic001G074100 Sobic010G165100 Sobic010G165100 Sobic002G045200--Sobic010G165100 Sobic002G045200--Sobic006G241800 Sobic002G045200--Sobic001G522300 Sobic002G045200--Sobic002G362700 Sobic002G311000 Sobic002G311000 Sobic002G045200--Sobic002G311000 Sobic002G142500 Sobic002G142500 Sobic002G045200--Sobic002G142500
Octagon: transcription factors


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