Gene annotation
Transcriptome id Sobic.006G158800.1
Synonym Sb06g023580
Functional annotation short-chain dehydrogenase/reductase, putative, expressed
UniProt C5YCW7
Pfam PF13561
Panther DB PTHR24322 PTHR24322:SF358
NCBI CDD KOG1208; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
KEGG Orthology K15095; (+)-neomenthol dehydrogenase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G01800 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os04g44950.1 : short-chain dehydrogenase/reductase, putative, expressed
MaizeGDB (Corn) Zm00025a056582 , Zm00025a010449
Brachypodium KQJ91918 , KQJ91919 , KQJ83750
Barley HORVU7Hr1G024270.1 , HORVU7Hr1G024270.2 , HORVU7Hr1G024270.3 , HORVU7Hr1G024270.4 , HORVU7Hr1G024270.5 , HORVU2Hr1G091440.6 , HORVU2Hr1G091440.7 , HORVU2Hr1G091440.4 , HORVU2Hr1G091440.5 , HORVU2Hr1G091440.2 , HORVU2Hr1G091440.3 , HORVU2Hr1G091440.1 , HORVU2Hr1G091440.8
Wheat TraesCS2B02G388300 , TraesCS2B02G388300 , TraesCS2A02G371000 , TraesCS2D02G367400 , TraesCS2D02G367400
Populus -


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cDNA sequences
Sobic.006G158800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G467800 expressed protein -
2 Sobic.001G166200 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
3 Sobic.001G493100 LTPL82 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.003G041900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
5 Sobic.004G329000 OsSCP10 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
6 Sobic.004G215100 expressed protein -
7 Sobic.006G172000 pectinesterase, putative, expressed -
8 Sobic.002G375900 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
9 Sobic.010G275800 callose synthase-like enzyme(PubMedID : 25311645)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
10 Sobic.003G251700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed K14486: K14486, auxin response factor
11 Sobic.006G135800 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.003G259300 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
13 Sobic.010G214800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@membrane associated DUF588 domain containing protein, putative, expressed -
14 Sobic.007G192200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@LTPL80 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.002G259200 POEI18 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
16 Sobic.009G225500 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
17 Sobic.003G055800 expressed protein -
18 Sobic.005G018050 - -
19 Sobic.006G147900 expressed protein -
20 Sobic.010G023400 phosphate-induced protein 1 conserved region domain containing protein, expressed -


Gene co-expression network
sample Sobic006G158800 Sobic006G158800 Sobic001G467800 Sobic001G467800 Sobic006G158800--Sobic001G467800 Sobic001G166200 Sobic001G166200 Sobic006G158800--Sobic001G166200 Sobic001G493100 Sobic001G493100 Sobic006G158800--Sobic001G493100 Sobic003G041900 Sobic003G041900 Sobic006G158800--Sobic003G041900 Sobic004G329000 Sobic004G329000 Sobic006G158800--Sobic004G329000 Sobic004G215100 Sobic004G215100 Sobic006G158800--Sobic004G215100 Sobic006G172000 Sobic006G172000 Sobic006G158800--Sobic006G172000 Sobic002G375900 Sobic002G375900 Sobic006G158800--Sobic002G375900 Sobic010G275800 Sobic010G275800 Sobic006G158800--Sobic010G275800 Sobic001G467800--Sobic003G041900 Sobic004G164700 Sobic004G164700 Sobic001G467800--Sobic004G164700 Sobic009G128800 Sobic009G128800 Sobic001G467800--Sobic009G128800 Sobic002G006100 Sobic002G006100 Sobic001G467800--Sobic002G006100 Sobic003G259300 Sobic003G259300 Sobic001G467800--Sobic003G259300 Sobic003G351900 Sobic003G351900 Sobic001G467800--Sobic003G351900 Sobic010G023400 Sobic010G023400 Sobic001G467800--Sobic010G023400 Sobic001G467800--Sobic004G329000 Sobic002G045200 Sobic002G045200 Sobic001G467800--Sobic002G045200 Sobic004G139900 Sobic004G139900 Sobic001G166200--Sobic004G139900 Sobic001G166200--Sobic004G215100 Sobic007G097100 Sobic007G097100 Sobic001G166200--Sobic007G097100 Sobic001G448000 Sobic001G448000 Sobic001G166200--Sobic001G448000 Sobic004G311600 Sobic004G311600 Sobic001G166200--Sobic004G311600 Sobic001G075700 Sobic001G075700 Sobic001G166200--Sobic001G075700 Sobic001G166200--Sobic001G493100 Sobic004G286200 Sobic004G286200 Sobic001G166200--Sobic004G286200 Sobic002G378600 Sobic002G378600 Sobic001G166200--Sobic002G378600 Sobic001G493100--Sobic006G172000 Sobic006G135800 Sobic006G135800 Sobic001G493100--Sobic006G135800 Sobic006G226000 Sobic006G226000 Sobic001G493100--Sobic006G226000 Sobic006G041700 Sobic006G041700 Sobic001G493100--Sobic006G041700 Sobic006G197400 Sobic006G197400 Sobic001G493100--Sobic006G197400 Sobic007G160400 Sobic007G160400 Sobic001G493100--Sobic007G160400 Sobic010G037901 Sobic010G037901 Sobic001G493100--Sobic010G037901 Sobic003G086800 Sobic003G086800 Sobic001G493100--Sobic003G086800 Sobic009G031800 Sobic009G031800 Sobic001G493100--Sobic009G031800 Sobic003G041900--Sobic004G164700 Sobic003G041900--Sobic010G023400 Sobic010G192500 Sobic010G192500 Sobic003G041900--Sobic010G192500 Sobic006G241800 Sobic006G241800 Sobic003G041900--Sobic006G241800 Sobic010G086000 Sobic010G086000 Sobic003G041900--Sobic010G086000 Sobic008G190000 Sobic008G190000 Sobic003G041900--Sobic008G190000 Sobic004G317200 Sobic004G317200 Sobic003G041900--Sobic004G317200 Sobic006G142500 Sobic006G142500 Sobic003G041900--Sobic006G142500 Sobic006G211900 Sobic006G211900 Sobic003G041900--Sobic006G211900 Sobic009G257900 Sobic009G257900 Sobic004G329000--Sobic009G257900 Sobic004G329000--Sobic003G351900 Sobic004G113900 Sobic004G113900 Sobic004G329000--Sobic004G113900 Sobic003G251700 Sobic003G251700 Sobic004G329000--Sobic003G251700 Sobic004G329000--Sobic006G142500 Sobic004G329000--Sobic004G164700 Sobic004G329000--Sobic008G190000 Sobic006G050900 Sobic006G050900 Sobic004G329000--Sobic006G050900 Sobic001G452900 Sobic001G452900 Sobic004G329000--Sobic001G452900 Sobic004G215100--Sobic003G251700 Sobic004G215100--Sobic006G172000 Sobic004G115700 Sobic004G115700 Sobic004G215100--Sobic004G115700 Sobic004G269100 Sobic004G269100 Sobic004G215100--Sobic004G269100 Sobic004G215100--Sobic001G493100 Sobic004G215100--Sobic001G448000 Sobic004G215100--Sobic007G097100 Sobic004G215100--Sobic002G378600 Sobic010G106100 Sobic010G106100 Sobic004G215100--Sobic010G106100 Sobic006G172000--Sobic001G493100 Sobic006G172000--Sobic003G251700 Sobic006G172000--Sobic006G135800 Sobic006G172000--Sobic006G041700 Sobic006G172000--Sobic007G097100 Sobic004G330200 Sobic004G330200 Sobic006G172000--Sobic004G330200 Sobic002G175200 Sobic002G175200 Sobic006G172000--Sobic002G175200 Sobic001G246600 Sobic001G246600 Sobic006G172000--Sobic001G246600 Sobic006G172000--Sobic006G226000 Sobic002G375900--Sobic006G135800 Sobic008G052300 Sobic008G052300 Sobic002G375900--Sobic008G052300 Sobic002G054400 Sobic002G054400 Sobic002G375900--Sobic002G054400 Sobic002G375900--Sobic003G251700 Sobic002G375900--Sobic004G269100 Sobic005G045700 Sobic005G045700 Sobic002G375900--Sobic005G045700 Sobic002G366300 Sobic002G366300 Sobic002G375900--Sobic002G366300 Sobic007G192200 Sobic007G192200 Sobic002G375900--Sobic007G192200 Sobic002G375900--Sobic006G226000 Sobic010G275800--Sobic010G192500 Sobic005G032600 Sobic005G032600 Sobic010G275800--Sobic005G032600 Sobic004G179800 Sobic004G179800 Sobic010G275800--Sobic004G179800 Sobic002G315500 Sobic002G315500 Sobic010G275800--Sobic002G315500 Sobic009G225500 Sobic009G225500 Sobic010G275800--Sobic009G225500 Sobic002G335900 Sobic002G335900 Sobic010G275800--Sobic002G335900 Sobic010G275800--Sobic006G142500 Sobic002G027600 Sobic002G027600 Sobic010G275800--Sobic002G027600 Sobic002G337600 Sobic002G337600 Sobic010G275800--Sobic002G337600
Octagon: transcription factors


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