Gene annotation
Transcriptome id Sobic.001G166200.1
Synonym Sb01g014530, DNA binding with One Finger, SbDof9
Functional annotation Homologous to Dof genes in Arabidopsis and rice. (PubMedID : 21161392)
dof zinc finger domain containing protein, putative, expressed
UniProt H6VSX1 , R4N5W2 , C5WSA3
Pfam PF02701
Panther DB PTHR31992 PTHR31992:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT1G21340 : Dof-type zinc finger DNA-binding family protein
RAP-DB (Rice) LOC_Os03g42200.1 : dof zinc finger domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a049197 , Zm00025a004485 , Zm00025a009285 , Zm00025a023031 , Zm00025a017356 , Zm00025a007115 , Zm00025a032602 , Zm00025a007401 , Zm00025a047370 , Zm00025a052752 , Zm00025a006464 , Zm00025a039572 , Zm00025a016727 , Zm00025a014147 , Zm00025a021740 , Zm00025a017302 , Zm00025a001854 , Zm00025a000851 , Zm00025a021884 , Zm00025a032473 , Zm00025a057389 , Zm00025a014756 , Zm00025a008288 , Zm00025a004967 , Zm00025a048181 , Zm00025a026723 , Zm00025a043793
Brachypodium KQK22335 , KQK14158 , KQK07701 , PNT73247 , PNT69224 , KQK00955 , KQK16070 , KQK11789 , PNT65625 , PNT65624 , KQJ98766 , PNT69485 , KQJ90639 , KQK03138 , KQK06036 , KQK14319 , KQK23432 , KQK00737 , KQJ84092 , KQK00738
Barley HORVU6Hr1G065250.4 , HORVU6Hr1G065250.5 , HORVU6Hr1G065250.6 , HORVU6Hr1G065250.7 , HORVU2Hr1G119110.7 , HORVU5Hr1G048700.1 , HORVU6Hr1G065250.2 , HORVU6Hr1G065250.3 , HORVU2Hr1G119110.9 , HORVU2Hr1G119110.8 , HORVU6Hr1G065250.8 , HORVU6Hr1G065250.9 , HORVU2Hr1G119110.3 , HORVU2Hr1G013060.1 , HORVU6Hr1G065250.1 , HORVU2Hr1G119110.6 , HORVU2Hr1G119110.5 , HORVU6Hr1G065250.10 , HORVU2Hr1G119160.6 , HORVU2Hr1G119160.4 , HORVU2Hr1G119160.2 , HORVU2Hr1G119160.3 , HORVU2Hr1G119160.1 , HORVU5Hr1G097620.1 , HORVU1Hr1G005390.4 , HORVU3Hr1G116220.2 , HORVU3Hr1G116220.1 , HORVU7Hr1G043250.2 , HORVU1Hr1G044560.1 , HORVU4Hr1G074990.3 , HORVU4Hr1G074990.2 , HORVU4Hr1G074990.1 , HORVU2Hr1G119110.4 , HORVU1Hr1G005390.1 , HORVU1Hr1G005390.2 , HORVU1Hr1G005390.3 , HORVU1Hr1G074140.1 , HORVU3Hr1G083460.1 , HORVU4Hr1G013890.1
Wheat TraesCS5B02G154100 , TraesCS2A02G402200 , TraesCS4B02G206800 , TraesCS2D02G563000 , TraesCS4A02G097800 , TraesCS5A02G155900 , TraesCS4B02G286400 , TraesCS2D02G563400 , TraesCS6D02G236700 , TraesCS2D02G563200 , TraesCS6B02G301500 , TraesCS4D02G285100 , TraesCS2B02G592600 , TraesCS4D02G207600 , TraesCS2D02G399500 , TraesCS2B02G592900 , TraesCS2A02G590800 , TraesCS2B02G592800 , TraesCS4A02G017700 , TraesCS6A02G274000 , TraesCS2B02G592700 , TraesCS2A02G591200 , TraesCS1B02G045000 , TraesCS1B02G045000 , TraesCS1B02G045000 , TraesCS5D02G161000 , TraesCS1D02G036700 , TraesCS6D02G254200 , TraesCS1D02G036700 , TraesCS6B02G270100 , TraesCS2B02G420400 , TraesCS6A02G255500
Populus PNT43441


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cDNA sequences
Sobic.001G166200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G139900 ATP binding, related, putative, expressed -
2 Sobic.004G215100 expressed protein -
3 Sobic.007G097100 aspartic proteinase nepenthesin precursor, putative, expressed -
4 Sobic.001G448000 AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
5 Sobic.004G311600 lysM domain-containing GPI-anchored protein precursor, putative, expressed -
6 Sobic.001G075700 AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
7 Sobic.001G493100 LTPL82 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.004G286200 DUF630/DUF632 domains containing protein, putative, expressed -
9 Sobic.002G378600 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
10 Sobic.008G190000 leucine-rich repeat family protein, putative, expressed -
11 Sobic.004G329000 OsSCP10 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
12 Sobic.006G172000 pectinesterase, putative, expressed -
13 Sobic.003G251700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed K14486: K14486, auxin response factor
14 Sobic.004G269100 ATROPGEF7/ROPGEF7, putative, expressed -
15 Sobic.001G461800 zinc finger family protein, putative, expressed -
16 Sobic.009G200000 expressed protein -
17 Sobic.002G259200 POEI18 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
18 Sobic.004G164700 expressed protein -
19 Sobic.004G222300 DEF7 - Defensin and Defensin-like DEFL family, expressed -
20 Sobic.005G092700 expressed protein -


Gene co-expression network
sample Sobic001G166200 Sobic001G166200 Sobic004G139900 Sobic004G139900 Sobic001G166200--Sobic004G139900 Sobic004G215100 Sobic004G215100 Sobic001G166200--Sobic004G215100 Sobic007G097100 Sobic007G097100 Sobic001G166200--Sobic007G097100 Sobic001G448000 Sobic001G448000 Sobic001G166200--Sobic001G448000 Sobic004G311600 Sobic004G311600 Sobic001G166200--Sobic004G311600 Sobic001G075700 Sobic001G075700 Sobic001G166200--Sobic001G075700 Sobic001G493100 Sobic001G493100 Sobic001G166200--Sobic001G493100 Sobic004G286200 Sobic004G286200 Sobic001G166200--Sobic004G286200 Sobic002G378600 Sobic002G378600 Sobic001G166200--Sobic002G378600 Sobic004G139900--Sobic001G448000 Sobic006G255300 Sobic006G255300 Sobic004G139900--Sobic006G255300 Sobic004G139900--Sobic007G097100 Sobic003G350400 Sobic003G350400 Sobic004G139900--Sobic003G350400 Sobic004G139900--Sobic004G311600 Sobic008G042200 Sobic008G042200 Sobic004G139900--Sobic008G042200 Sobic006G016700 Sobic006G016700 Sobic004G139900--Sobic006G016700 Sobic001G276800 Sobic001G276800 Sobic004G139900--Sobic001G276800 Sobic009G200000 Sobic009G200000 Sobic004G139900--Sobic009G200000 Sobic003G251700 Sobic003G251700 Sobic004G215100--Sobic003G251700 Sobic006G172000 Sobic006G172000 Sobic004G215100--Sobic006G172000 Sobic004G115700 Sobic004G115700 Sobic004G215100--Sobic004G115700 Sobic004G269100 Sobic004G269100 Sobic004G215100--Sobic004G269100 Sobic004G215100--Sobic001G493100 Sobic004G215100--Sobic001G448000 Sobic004G215100--Sobic007G097100 Sobic004G215100--Sobic002G378600 Sobic010G106100 Sobic010G106100 Sobic004G215100--Sobic010G106100 Sobic007G097100--Sobic006G172000 Sobic001G320000 Sobic001G320000 Sobic007G097100--Sobic001G320000 Sobic007G097100--Sobic001G493100 Sobic004G142400 Sobic004G142400 Sobic007G097100--Sobic004G142400 Sobic007G160400 Sobic007G160400 Sobic007G097100--Sobic007G160400 Sobic006G226000 Sobic006G226000 Sobic007G097100--Sobic006G226000 Sobic007G097100--Sobic003G350400 Sobic006G135800 Sobic006G135800 Sobic007G097100--Sobic006G135800 Sobic006G041700 Sobic006G041700 Sobic007G097100--Sobic006G041700 Sobic001G448000--Sobic004G139900 Sobic001G448000--Sobic009G200000 Sobic001G448000--Sobic007G097100 Sobic001G448000--Sobic008G042200 Sobic001G448000--Sobic004G115700 Sobic001G448000--Sobic004G269100 Sobic001G448000--Sobic004G215100 Sobic008G123200 Sobic008G123200 Sobic001G448000--Sobic008G123200 Sobic005G092700 Sobic005G092700 Sobic001G448000--Sobic005G092700 Sobic006G247800 Sobic006G247800 Sobic004G311600--Sobic006G247800 Sobic002G286700 Sobic002G286700 Sobic004G311600--Sobic002G286700 Sobic004G311600--Sobic006G255300 Sobic004G311600--Sobic003G350400 Sobic003G196000 Sobic003G196000 Sobic004G311600--Sobic003G196000 Sobic004G311600--Sobic001G276800 Sobic002G230900 Sobic002G230900 Sobic004G311600--Sobic002G230900 Sobic004G311600--Sobic007G097100 Sobic004G311600--Sobic004G139900 Sobic001G160000 Sobic001G160000 Sobic001G075700--Sobic001G160000 Sobic001G075700--Sobic005G092700 Sobic001G075700--Sobic008G042200 Sobic008G190000 Sobic008G190000 Sobic001G075700--Sobic008G190000 Sobic005G125300 Sobic005G125300 Sobic001G075700--Sobic005G125300 Sobic004G302700 Sobic004G302700 Sobic001G075700--Sobic004G302700 Sobic001G075700--Sobic009G200000 Sobic006G187000 Sobic006G187000 Sobic001G075700--Sobic006G187000 Sobic003G366000 Sobic003G366000 Sobic001G075700--Sobic003G366000 Sobic001G493100--Sobic006G172000 Sobic001G493100--Sobic006G135800 Sobic001G493100--Sobic006G226000 Sobic001G493100--Sobic006G041700 Sobic006G197400 Sobic006G197400 Sobic001G493100--Sobic006G197400 Sobic001G493100--Sobic007G160400 Sobic010G037901 Sobic010G037901 Sobic001G493100--Sobic010G037901 Sobic003G086800 Sobic003G086800 Sobic001G493100--Sobic003G086800 Sobic009G031800 Sobic009G031800 Sobic001G493100--Sobic009G031800 Sobic008G118100 Sobic008G118100 Sobic004G286200--Sobic008G118100 Sobic009G225500 Sobic009G225500 Sobic004G286200--Sobic009G225500 Sobic009G224300 Sobic009G224300 Sobic004G286200--Sobic009G224300 Sobic004G286200--Sobic001G493100 Sobic002G187600 Sobic002G187600 Sobic004G286200--Sobic002G187600 Sobic007G050800 Sobic007G050800 Sobic004G286200--Sobic007G050800 Sobic004G286200--Sobic006G016700 Sobic004G286200--Sobic006G135800 Sobic004G286200--Sobic007G097100 Sobic002G378600--Sobic009G224300 Sobic003G102700 Sobic003G102700 Sobic002G378600--Sobic003G102700 Sobic002G378600--Sobic004G215100 Sobic002G378600--Sobic004G115700 Sobic002G378600--Sobic004G286200 Sobic006G084300 Sobic006G084300 Sobic002G378600--Sobic006G084300 Sobic002G378600--Sobic009G200000 Sobic001G268700 Sobic001G268700 Sobic002G378600--Sobic001G268700 Sobic002G367200 Sobic002G367200 Sobic002G378600--Sobic002G367200
Octagon: transcription factors


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