Gene annotation
Transcriptome id Sobic.001G352500.1
Synonym Sb01g033730
Functional annotation expressed protein
UniProt C5WXR5
Pfam PF13266
Panther DB PTHR31132 PTHR31132:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G35780 : -
RAP-DB (Rice) LOC_Os03g27010.1 : expressed protein
MaizeGDB (Corn) Zm00025a052087 , Zm00025a002707
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G352500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G475500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
2 Sobic.008G103700 nitrilase-associated protein, putative, expressed K18635: protein SPIRAL1 and related proteins
3 Sobic.006G054700 serine/threonine-protein kinase NAK, putative, expressed K13430: serine/threonine-protein kinase PBS1
4 Sobic.002G128800 fiber protein Fb34, putative, expressed -
5 Sobic.003G379600 methyltransferase, putative, expressed -
6 Sobic.010G238800 glycosyltransferase family 43 protein, putative, expressed -
7 Sobic.006G156000 ferredoxin-thioredoxin reductase, variable chain, putative, expressed -
8 Sobic.001G459900 leucine-rich repeat resistance protein, putative, expressed -
9 Sobic.009G189200 secretory carrier-associated membrane protein, putative, expressed -
10 Sobic.003G117500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RALFL9 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
11 Sobic.004G123000 expressed protein -
12 Sobic.003G122200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
13 Sobic.009G165500 Lung seven transmembrane receptor domain containing protein, putative, expressed -
14 Sobic.003G072900 OsRhmbd18 - Putative Rhomboid homologue, expressed -
15 Sobic.004G345500 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
16 Sobic.001G077000 similar to Cold acclimation protein COR413-PM1(PubMedID : 29862293)@cold acclimation protein WCOR413, putative, expressed -
17 Sobic.003G011100 reticulon domain containing protein, putative, expressed -
18 Sobic.001G502900 nicotiana lesion-inducing like, putative, expressed -
19 Sobic.001G418000 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12450: UDP-glucose 4,6-dehydratase
20 Sobic.001G399300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphotase protein, putative, expressed -


Gene co-expression network
sample Sobic001G352500 Sobic001G352500 Sobic001G475500 Sobic001G475500 Sobic001G352500--Sobic001G475500 Sobic008G103700 Sobic008G103700 Sobic001G352500--Sobic008G103700 Sobic006G054700 Sobic006G054700 Sobic001G352500--Sobic006G054700 Sobic002G128800 Sobic002G128800 Sobic001G352500--Sobic002G128800 Sobic003G379600 Sobic003G379600 Sobic001G352500--Sobic003G379600 Sobic010G238800 Sobic010G238800 Sobic001G352500--Sobic010G238800 Sobic006G156000 Sobic006G156000 Sobic001G352500--Sobic006G156000 Sobic001G459900 Sobic001G459900 Sobic001G352500--Sobic001G459900 Sobic009G189200 Sobic009G189200 Sobic001G352500--Sobic009G189200 Sobic001G502900 Sobic001G502900 Sobic001G475500--Sobic001G502900 Sobic003G160700 Sobic003G160700 Sobic001G475500--Sobic003G160700 Sobic003G122200 Sobic003G122200 Sobic001G475500--Sobic003G122200 Sobic005G113300 Sobic005G113300 Sobic001G475500--Sobic005G113300 Sobic007G150800 Sobic007G150800 Sobic001G475500--Sobic007G150800 Sobic009G173500 Sobic009G173500 Sobic001G475500--Sobic009G173500 Sobic001G361600 Sobic001G361600 Sobic001G475500--Sobic001G361600 Sobic004G220000 Sobic004G220000 Sobic001G475500--Sobic004G220000 Sobic003G117500 Sobic003G117500 Sobic001G475500--Sobic003G117500 Sobic004G024300 Sobic004G024300 Sobic008G103700--Sobic004G024300 Sobic001G034700 Sobic001G034700 Sobic008G103700--Sobic001G034700 Sobic008G103700--Sobic010G238800 Sobic003G306100 Sobic003G306100 Sobic008G103700--Sobic003G306100 Sobic003G344600 Sobic003G344600 Sobic008G103700--Sobic003G344600 Sobic003G443300 Sobic003G443300 Sobic008G103700--Sobic003G443300 Sobic002G335300 Sobic002G335300 Sobic008G103700--Sobic002G335300 Sobic008G103700--Sobic002G128800 Sobic001G432000 Sobic001G432000 Sobic008G103700--Sobic001G432000 Sobic006G054700--Sobic001G352500 Sobic006G054700--Sobic002G128800 Sobic006G054700--Sobic008G103700 Sobic006G201400 Sobic006G201400 Sobic006G054700--Sobic006G201400 Sobic009G042900 Sobic009G042900 Sobic006G054700--Sobic009G042900 Sobic002G252000 Sobic002G252000 Sobic006G054700--Sobic002G252000 Sobic006G054700--Sobic001G432000 Sobic002G270000 Sobic002G270000 Sobic006G054700--Sobic002G270000 Sobic002G338400 Sobic002G338400 Sobic006G054700--Sobic002G338400 Sobic002G128800--Sobic002G252000 Sobic002G128800--Sobic007G150800 Sobic001G418100 Sobic001G418100 Sobic002G128800--Sobic001G418100 Sobic002G396400 Sobic002G396400 Sobic002G128800--Sobic002G396400 Sobic002G128800--Sobic001G475500 Sobic010G052200 Sobic010G052200 Sobic002G128800--Sobic010G052200 Sobic002G128800--Sobic006G156000 Sobic003G219800 Sobic003G219800 Sobic002G128800--Sobic003G219800 Sobic002G128800--Sobic003G443300 Sobic006G137800 Sobic006G137800 Sobic003G379600--Sobic006G137800 Sobic007G198000 Sobic007G198000 Sobic003G379600--Sobic007G198000 Sobic001G533000 Sobic001G533000 Sobic003G379600--Sobic001G533000 Sobic003G379600--Sobic001G459900 Sobic003G379600--Sobic001G475500 Sobic006G159600 Sobic006G159600 Sobic003G379600--Sobic006G159600 Sobic004G217450 Sobic004G217450 Sobic003G379600--Sobic004G217450 Sobic003G379600--Sobic003G160700 Sobic004G345500 Sobic004G345500 Sobic003G379600--Sobic004G345500 Sobic009G220100 Sobic009G220100 Sobic010G238800--Sobic009G220100 Sobic010G238800--Sobic006G156000 Sobic010G238800--Sobic010G052200 Sobic010G238800--Sobic003G344600 Sobic010G238800--Sobic008G103700 Sobic010G238800--Sobic003G443300 Sobic010G238800--Sobic002G128800 Sobic005G168100 Sobic005G168100 Sobic010G238800--Sobic005G168100 Sobic001G084100 Sobic001G084100 Sobic010G238800--Sobic001G084100 Sobic006G156000--Sobic003G443300 Sobic006G156000--Sobic001G432000 Sobic006G156000--Sobic005G168100 Sobic006G156000--Sobic003G219800 Sobic006G156000--Sobic001G084100 Sobic001G304400 Sobic001G304400 Sobic006G156000--Sobic001G304400 Sobic009G212200 Sobic009G212200 Sobic006G156000--Sobic009G212200 Sobic002G361700 Sobic002G361700 Sobic006G156000--Sobic002G361700 Sobic001G040100 Sobic001G040100 Sobic006G156000--Sobic001G040100 Sobic010G023800 Sobic010G023800 Sobic001G459900--Sobic010G023800 Sobic001G459900--Sobic009G212200 Sobic001G281300 Sobic001G281300 Sobic001G459900--Sobic001G281300 Sobic001G459900--Sobic003G379600 Sobic001G334300 Sobic001G334300 Sobic001G459900--Sobic001G334300 Sobic010G060500 Sobic010G060500 Sobic001G459900--Sobic010G060500 Sobic004G231300 Sobic004G231300 Sobic001G459900--Sobic004G231300 Sobic001G014000 Sobic001G014000 Sobic001G459900--Sobic001G014000 Sobic009G144300 Sobic009G144300 Sobic001G459900--Sobic009G144300 Sobic006G102900 Sobic006G102900 Sobic009G189200--Sobic006G102900 Sobic001G261549 Sobic001G261549 Sobic009G189200--Sobic001G261549 Sobic002G057500 Sobic002G057500 Sobic009G189200--Sobic002G057500 Sobic010G144900 Sobic010G144900 Sobic009G189200--Sobic010G144900 Sobic007G044400 Sobic007G044400 Sobic009G189200--Sobic007G044400 Sobic004G285900 Sobic004G285900 Sobic009G189200--Sobic004G285900 Sobic003G084300 Sobic003G084300 Sobic009G189200--Sobic003G084300 Sobic009G189200--Sobic003G122200 Sobic001G131600 Sobic001G131600 Sobic009G189200--Sobic001G131600
Octagon: transcription factors


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