Gene annotation
Transcriptome id Sobic.006G054700.2,Sobic.006G054700.1,Sobic.006G054700.3
Synonym PBS1, Sb06g014310
Functional annotation serine/threonine-protein kinase NAK, putative, expressed
UniProt A0A1Z5RCH9 , C5YEV8
Pfam PF00069 PF07714
Panther DB PTHR27001 PTHR27001:SF42
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology K13430; serine/threonine-protein kinase PBS1
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G13160 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os04g32310.1 : serine/threonine-protein kinase NAK, putative, expressed
MaizeGDB (Corn) Zm00025a011720
Brachypodium KQK11417 , KQK11418 , KQJ99610 , KQJ82392 , KQJ82393
Barley HORVU2Hr1G070690.11 , HORVU2Hr1G070690.10 , HORVU2Hr1G070690.8 , HORVU2Hr1G070690.9 , HORVU2Hr1G070690.6 , HORVU2Hr1G070690.7 , HORVU2Hr1G070690.4 , HORVU2Hr1G070690.5 , HORVU2Hr1G070690.2 , HORVU2Hr1G070690.3 , HORVU2Hr1G070690.1
Wheat TraesCS2B02G302800 , TraesCS2B02G302800 , TraesCS2A02G285700 , TraesCS2A02G285700 , TraesCS2D02G284200 , TraesCS2D02G284200 , TraesCS2D02G284200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G352500 expressed protein -
2 Sobic.002G128800 fiber protein Fb34, putative, expressed -
3 Sobic.008G103700 nitrilase-associated protein, putative, expressed K18635: protein SPIRAL1 and related proteins
4 Sobic.006G201400 seed specific protein Bn15D1B, putative, expressed -
5 Sobic.009G042900 expressed protein K17411: small subunit ribosomal protein S33
6 Sobic.002G252000 CHIT13 - Chitinase family protein precursor, expressed -
7 Sobic.001G432000 LYR motif containing protein, putative, expressed -
8 Sobic.002G270000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BAG domain-containing protein, putative, expressed -
9 Sobic.002G338400 uncharacterized secreted protein, putative, expressed -
10 Sobic.001G304400 expressed protein -
11 Sobic.006G156000 ferredoxin-thioredoxin reductase, variable chain, putative, expressed -
12 Sobic.006G266300 expressed protein -
13 Sobic.007G150800 expressed protein -
14 Sobic.003G379600 methyltransferase, putative, expressed -
15 Sobic.001G286200 expressed protein K03966: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 10
16 Sobic.001G475500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
17 Sobic.009G062000 ribosomal protein L51, putative, expressed K03946: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2
18 Sobic.007G211500 expressed protein -
19 Sobic.003G011100 reticulon domain containing protein, putative, expressed -
20 Sobic.001G107100 "SRS5(Ortholog in rice:Segami, 2012)"(PubMedID : 31659833)@tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha


Gene co-expression network
sample Sobic006G054700 Sobic006G054700 Sobic001G352500 Sobic001G352500 Sobic006G054700--Sobic001G352500 Sobic002G128800 Sobic002G128800 Sobic006G054700--Sobic002G128800 Sobic008G103700 Sobic008G103700 Sobic006G054700--Sobic008G103700 Sobic006G201400 Sobic006G201400 Sobic006G054700--Sobic006G201400 Sobic009G042900 Sobic009G042900 Sobic006G054700--Sobic009G042900 Sobic002G252000 Sobic002G252000 Sobic006G054700--Sobic002G252000 Sobic001G432000 Sobic001G432000 Sobic006G054700--Sobic001G432000 Sobic002G270000 Sobic002G270000 Sobic006G054700--Sobic002G270000 Sobic002G338400 Sobic002G338400 Sobic006G054700--Sobic002G338400 Sobic001G475500 Sobic001G475500 Sobic001G352500--Sobic001G475500 Sobic001G352500--Sobic008G103700 Sobic001G352500--Sobic006G054700 Sobic001G352500--Sobic002G128800 Sobic003G379600 Sobic003G379600 Sobic001G352500--Sobic003G379600 Sobic010G238800 Sobic010G238800 Sobic001G352500--Sobic010G238800 Sobic006G156000 Sobic006G156000 Sobic001G352500--Sobic006G156000 Sobic001G459900 Sobic001G459900 Sobic001G352500--Sobic001G459900 Sobic009G189200 Sobic009G189200 Sobic001G352500--Sobic009G189200 Sobic002G128800--Sobic002G252000 Sobic007G150800 Sobic007G150800 Sobic002G128800--Sobic007G150800 Sobic001G418100 Sobic001G418100 Sobic002G128800--Sobic001G418100 Sobic002G396400 Sobic002G396400 Sobic002G128800--Sobic002G396400 Sobic002G128800--Sobic001G475500 Sobic010G052200 Sobic010G052200 Sobic002G128800--Sobic010G052200 Sobic002G128800--Sobic006G156000 Sobic003G219800 Sobic003G219800 Sobic002G128800--Sobic003G219800 Sobic003G443300 Sobic003G443300 Sobic002G128800--Sobic003G443300 Sobic004G024300 Sobic004G024300 Sobic008G103700--Sobic004G024300 Sobic001G034700 Sobic001G034700 Sobic008G103700--Sobic001G034700 Sobic008G103700--Sobic010G238800 Sobic003G306100 Sobic003G306100 Sobic008G103700--Sobic003G306100 Sobic003G344600 Sobic003G344600 Sobic008G103700--Sobic003G344600 Sobic008G103700--Sobic003G443300 Sobic002G335300 Sobic002G335300 Sobic008G103700--Sobic002G335300 Sobic008G103700--Sobic002G128800 Sobic008G103700--Sobic001G432000 Sobic003G254300 Sobic003G254300 Sobic006G201400--Sobic003G254300 Sobic006G201400--Sobic004G024300 Sobic004G220000 Sobic004G220000 Sobic006G201400--Sobic004G220000 Sobic001G351000 Sobic001G351000 Sobic006G201400--Sobic001G351000 Sobic002G073800 Sobic002G073800 Sobic006G201400--Sobic002G073800 Sobic009G212200 Sobic009G212200 Sobic006G201400--Sobic009G212200 Sobic006G201400--Sobic003G306100 Sobic001G304400 Sobic001G304400 Sobic006G201400--Sobic001G304400 Sobic006G201400--Sobic001G432000 Sobic009G042900--Sobic001G304400 Sobic001G286200 Sobic001G286200 Sobic009G042900--Sobic001G286200 Sobic001G510800 Sobic001G510800 Sobic009G042900--Sobic001G510800 Sobic002G078300 Sobic002G078300 Sobic009G042900--Sobic002G078300 Sobic010G264300 Sobic010G264300 Sobic009G042900--Sobic010G264300 Sobic006G035900 Sobic006G035900 Sobic009G042900--Sobic006G035900 Sobic001G058900 Sobic001G058900 Sobic009G042900--Sobic001G058900 Sobic006G057200 Sobic006G057200 Sobic009G042900--Sobic006G057200 Sobic002G304900 Sobic002G304900 Sobic009G042900--Sobic002G304900 Sobic002G252000--Sobic002G128800 Sobic002G252000--Sobic002G338400 Sobic002G252000--Sobic001G418100 Sobic002G252000--Sobic002G396400 Sobic002G252000--Sobic006G156000 Sobic001G038300 Sobic001G038300 Sobic002G252000--Sobic001G038300 Sobic001G107100 Sobic001G107100 Sobic002G252000--Sobic001G107100 Sobic002G252000--Sobic003G443300 Sobic002G252000--Sobic003G219800 Sobic010G251600 Sobic010G251600 Sobic001G432000--Sobic010G251600 Sobic005G168100 Sobic005G168100 Sobic001G432000--Sobic005G168100 Sobic001G432000--Sobic001G304400 Sobic009G232900 Sobic009G232900 Sobic001G432000--Sobic009G232900 Sobic007G019400 Sobic007G019400 Sobic001G432000--Sobic007G019400 Sobic003G150000 Sobic003G150000 Sobic001G432000--Sobic003G150000 Sobic001G054900 Sobic001G054900 Sobic001G432000--Sobic001G054900 Sobic010G206200 Sobic010G206200 Sobic001G432000--Sobic010G206200 Sobic001G432000--Sobic006G156000 Sobic001G084100 Sobic001G084100 Sobic002G270000--Sobic001G084100 Sobic002G270000--Sobic002G128800 Sobic002G270000--Sobic010G238800 Sobic001G063500 Sobic001G063500 Sobic002G270000--Sobic001G063500 Sobic009G215000 Sobic009G215000 Sobic002G270000--Sobic009G215000 Sobic002G270000--Sobic002G252000 Sobic002G270000--Sobic006G156000 Sobic002G270000--Sobic002G396400 Sobic002G270000--Sobic010G052200 Sobic002G338400--Sobic002G252000 Sobic009G232200 Sobic009G232200 Sobic002G338400--Sobic009G232200 Sobic002G338400--Sobic002G396400 Sobic002G338400--Sobic002G128800 Sobic006G075000 Sobic006G075000 Sobic002G338400--Sobic006G075000 Sobic006G278100 Sobic006G278100 Sobic002G338400--Sobic006G278100 Sobic002G338400--Sobic001G418100 Sobic002G347300 Sobic002G347300 Sobic002G338400--Sobic002G347300 Sobic006G038200 Sobic006G038200 Sobic002G338400--Sobic006G038200
Octagon: transcription factors


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