Gene annotation
Transcriptome id Sobic.003G226300.1,Sobic.003G226300.2
Synonym Sb03g028410
Functional annotation Ceramidase family protein (At) (PubMedID : 27208977)
neutral ceramidase precursor, putative, expressed
UniProt A0A1B6Q4S6 , A0A1W0VYI2
Pfam PF04734 PF17048
Panther DB PTHR12670:SF4 PTHR12670
NCBI CDD -
KEGG Orthology K12349; neutral ceramidase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G38010 : Neutral/alkaline non-lysosomal ceramidase
RAP-DB (Rice) LOC_Os01g43520.1,LOC_Os01g43520.2 : neutral ceramidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a028363
Brachypodium -
Barley HORVU5Hr1G002000.18 , HORVU3Hr1G055870.6 , HORVU3Hr1G055870.4 , HORVU3Hr1G055870.5 , HORVU3Hr1G055870.2 , HORVU3Hr1G055870.3 , HORVU3Hr1G055870.1 , HORVU5Hr1G002000.9 , HORVU5Hr1G002000.8 , HORVU5Hr1G002000.1 , HORVU5Hr1G002000.3 , HORVU5Hr1G002000.2 , HORVU5Hr1G002000.5 , HORVU5Hr1G002000.7 , HORVU5Hr1G002000.6 , HORVU5Hr1G002000.20 , HORVU5Hr1G002000.21 , HORVU5Hr1G002000.22 , HORVU5Hr1G002000.23 , HORVU5Hr1G002000.24 , HORVU5Hr1G002000.19 , HORVU5Hr1G002000.15 , HORVU5Hr1G002000.14 , HORVU5Hr1G002000.17 , HORVU5Hr1G002000.16 , HORVU5Hr1G002000.11 , HORVU5Hr1G002000.10 , HORVU5Hr1G002000.13 , HORVU5Hr1G002000.12
Wheat TraesCS3B02G255000 , TraesCS3B02G255000 , TraesCS3D02G227900 , TraesCS5B02G012600 , TraesCS3A02G225500 , TraesCS5D02G019600
Populus -


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cDNA sequences
Sobic.003G226300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G168500 serpin domain containing protein, putative, expressed K13963: serpin B
2 Sobic.002G193600 endoglucanase, putative, expressed -
3 Sobic.001G294600 RNA recognition motif containing protein, putative, expressed K14396: PABPN1, polyadenylate-binding protein 2
4 Sobic.003G252900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
5 Sobic.001G401900 wound-induced protein WI12, putative, expressed -
6 Sobic.005G121200 "similar to HVA22-like protein e, putative, expressed"(PubMedID : 29862293)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
7 Sobic.004G108100 Ca exchanger(PubMedID : 22196357)@calcium-binding EF hand family protein, putative, expressed -
8 Sobic.003G222200 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
9 Sobic.001G452200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Caleosin-related family protein("PubMedID : 26759170,PubMedID : 24597475")@caleosin related protein, putative, expressed K17991: peroxygenase
10 Sobic.006G114700 Up-reguralion under drought(PubMedID : 24916767)@phosphofructokinase 2("PubMedID : 26759170,PubMedID : 24597475")@phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
11 Sobic.003G055900 phosphatidylinositolglycan-related, putative, expressed K03858: PIGH, phosphatidylinositol N-acetylglucosaminyltransferase subunit H
12 Sobic.006G148700 kinase, pfkB family, putative, expressed K00856: E2.7.1.20, adenosine kinase
13 Sobic.005G183200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@14-3-3 protein, putative, expressed K06630: 14-3-3 protein epsilon
14 Sobic.002G107400 aldehyde oxidase, putative, expressed -
15 Sobic.003G194400 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
16 Sobic.004G243300 expressed protein -
17 Sobic.004G101400 Up-reguralion under drought(PubMedID : 24916767)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
18 Sobic.004G303600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.004G333100 expressed protein -
20 Sobic.005G084900 OsDegp12 - Putative Deg protease homologue, expressed -


Gene co-expression network
sample Sobic003G226300 Sobic003G226300 Sobic001G168500 Sobic001G168500 Sobic003G226300--Sobic001G168500 Sobic002G193600 Sobic002G193600 Sobic003G226300--Sobic002G193600 Sobic001G294600 Sobic001G294600 Sobic003G226300--Sobic001G294600 Sobic003G252900 Sobic003G252900 Sobic003G226300--Sobic003G252900 Sobic001G401900 Sobic001G401900 Sobic003G226300--Sobic001G401900 Sobic005G121200 Sobic005G121200 Sobic003G226300--Sobic005G121200 Sobic004G108100 Sobic004G108100 Sobic003G226300--Sobic004G108100 Sobic003G222200 Sobic003G222200 Sobic003G226300--Sobic003G222200 Sobic001G452200 Sobic001G452200 Sobic003G226300--Sobic001G452200 Sobic001G168500--Sobic002G193600 Sobic001G168500--Sobic001G294600 Sobic001G168500--Sobic003G252900 Sobic001G168500--Sobic003G226300 Sobic001G168600 Sobic001G168600 Sobic001G168500--Sobic001G168600 Sobic004G264600 Sobic004G264600 Sobic001G168500--Sobic004G264600 Sobic007G225300 Sobic007G225300 Sobic001G168500--Sobic007G225300 Sobic004G172100 Sobic004G172100 Sobic001G168500--Sobic004G172100 Sobic001G480800 Sobic001G480800 Sobic001G168500--Sobic001G480800 Sobic002G193600--Sobic001G168500 Sobic002G193600--Sobic005G121200 Sobic008G029300 Sobic008G029300 Sobic002G193600--Sobic008G029300 Sobic002G193600--Sobic003G226300 Sobic002G173800 Sobic002G173800 Sobic002G193600--Sobic002G173800 Sobic002G075800 Sobic002G075800 Sobic002G193600--Sobic002G075800 Sobic004G203500 Sobic004G203500 Sobic002G193600--Sobic004G203500 Sobic005G061033 Sobic005G061033 Sobic002G193600--Sobic005G061033 Sobic002G193600--Sobic001G294600 Sobic003G358200 Sobic003G358200 Sobic001G294600--Sobic003G358200 Sobic001G294600--Sobic003G252900 Sobic008G058700 Sobic008G058700 Sobic001G294600--Sobic008G058700 Sobic006G107400 Sobic006G107400 Sobic001G294600--Sobic006G107400 Sobic005G084900 Sobic005G084900 Sobic001G294600--Sobic005G084900 Sobic001G067000 Sobic001G067000 Sobic001G294600--Sobic001G067000 Sobic001G294600--Sobic001G168500 Sobic001G379000 Sobic001G379000 Sobic001G294600--Sobic001G379000 Sobic006G164000 Sobic006G164000 Sobic001G294600--Sobic006G164000 Sobic003G252900--Sobic008G058700 Sobic003G312400 Sobic003G312400 Sobic003G252900--Sobic003G312400 Sobic003G126800 Sobic003G126800 Sobic003G252900--Sobic003G126800 Sobic003G319000 Sobic003G319000 Sobic003G252900--Sobic003G319000 Sobic003G410400 Sobic003G410400 Sobic003G252900--Sobic003G410400 Sobic003G252900--Sobic001G294600 Sobic006G129000 Sobic006G129000 Sobic003G252900--Sobic006G129000 Sobic009G182200 Sobic009G182200 Sobic003G252900--Sobic009G182200 Sobic010G088300 Sobic010G088300 Sobic003G252900--Sobic010G088300 Sobic001G396900 Sobic001G396900 Sobic001G401900--Sobic001G396900 Sobic004G243300 Sobic004G243300 Sobic001G401900--Sobic004G243300 Sobic009G148000 Sobic009G148000 Sobic001G401900--Sobic009G148000 Sobic005G165800 Sobic005G165800 Sobic001G401900--Sobic005G165800 Sobic010G250100 Sobic010G250100 Sobic001G401900--Sobic010G250100 Sobic001G507000 Sobic001G507000 Sobic001G401900--Sobic001G507000 Sobic005G138500 Sobic005G138500 Sobic001G401900--Sobic005G138500 Sobic005G068800 Sobic005G068800 Sobic001G401900--Sobic005G068800 Sobic006G034300 Sobic006G034300 Sobic001G401900--Sobic006G034300 Sobic001G127800 Sobic001G127800 Sobic005G121200--Sobic001G127800 Sobic001G460300 Sobic001G460300 Sobic005G121200--Sobic001G460300 Sobic002G337800 Sobic002G337800 Sobic005G121200--Sobic002G337800 Sobic003G278700 Sobic003G278700 Sobic005G121200--Sobic003G278700 Sobic009G030200 Sobic009G030200 Sobic005G121200--Sobic009G030200 Sobic001G396400 Sobic001G396400 Sobic005G121200--Sobic001G396400 Sobic003G198200 Sobic003G198200 Sobic005G121200--Sobic003G198200 Sobic007G152800 Sobic007G152800 Sobic005G121200--Sobic007G152800 Sobic003G198150 Sobic003G198150 Sobic005G121200--Sobic003G198150 Sobic003G194400 Sobic003G194400 Sobic004G108100--Sobic003G194400 Sobic005G183200 Sobic005G183200 Sobic004G108100--Sobic005G183200 Sobic006G114700 Sobic006G114700 Sobic004G108100--Sobic006G114700 Sobic009G006500 Sobic009G006500 Sobic004G108100--Sobic009G006500 Sobic010G101300 Sobic010G101300 Sobic004G108100--Sobic010G101300 Sobic003G011400 Sobic003G011400 Sobic004G108100--Sobic003G011400 Sobic001G385900 Sobic001G385900 Sobic004G108100--Sobic001G385900 Sobic001G200700 Sobic001G200700 Sobic004G108100--Sobic001G200700 Sobic003G292400 Sobic003G292400 Sobic004G108100--Sobic003G292400 Sobic003G222200--Sobic010G250100 Sobic001G442700 Sobic001G442700 Sobic003G222200--Sobic001G442700 Sobic009G073400 Sobic009G073400 Sobic003G222200--Sobic009G073400 Sobic006G172200 Sobic006G172200 Sobic003G222200--Sobic006G172200 Sobic001G235700 Sobic001G235700 Sobic003G222200--Sobic001G235700 Sobic001G123100 Sobic001G123100 Sobic003G222200--Sobic001G123100 Sobic010G079100 Sobic010G079100 Sobic003G222200--Sobic010G079100 Sobic001G157600 Sobic001G157600 Sobic003G222200--Sobic001G157600 Sobic003G222200--Sobic001G507000 Sobic001G452200--Sobic009G006500 Sobic003G015200 Sobic003G015200 Sobic001G452200--Sobic003G015200 Sobic007G058600 Sobic007G058600 Sobic001G452200--Sobic007G058600 Sobic009G015500 Sobic009G015500 Sobic001G452200--Sobic009G015500 Sobic002G107400 Sobic002G107400 Sobic001G452200--Sobic002G107400 Sobic006G181900 Sobic006G181900 Sobic001G452200--Sobic006G181900 Sobic002G416500 Sobic002G416500 Sobic001G452200--Sobic002G416500 Sobic010G070750 Sobic010G070750 Sobic001G452200--Sobic010G070750 Sobic004G308300 Sobic004G308300 Sobic001G452200--Sobic004G308300
Octagon: transcription factors


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