Gene annotation
Transcriptome id Sobic.001G401900.2
Synonym
Functional annotation wound-induced protein WI12, putative, expressed
UniProt A0A1Z5S9X9
Pfam PF07107
Panther DB PTHR33703 PTHR33703:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G01740 : Nuclear transport factor 2 (NTF2) family protein
RAP-DB (Rice) LOC_Os03g18770.1 : wound-induced protein WI12, putative, expressed
MaizeGDB (Corn) Zm00025a049245 , Zm00025a052616 , Zm00025a002058
Brachypodium KQK22072 , KQK14507
Barley HORVU2Hr1G015360.3 , HORVU2Hr1G015360.2 , HORVU2Hr1G015360.7 , HORVU2Hr1G015360.6 , HORVU2Hr1G015360.5 , HORVU2Hr1G015360.4 , HORVU2Hr1G015360.9 , HORVU2Hr1G015360.8 , HORVU2Hr1G015360.10 , HORVU2Hr1G015410.1 , HORVU4Hr1G054970.2 , HORVU4Hr1G054970.4 , HORVU4Hr1G054970.3 , HORVU4Hr1G054970.1 , HORVU2Hr1G015410.3 , HORVU2Hr1G015410.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G396900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under drought(PubMedID : 24916767)@mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
2 Sobic.004G243300 expressed protein -
3 Sobic.009G148000 anthranilate phosphoribosyltransferase, putative, expressed -
4 Sobic.005G165800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@SEY1, putative, expressed -
5 Sobic.010G250100 "CIL, CIA2 like (Chloroplast import apparatus)"(PubMedID : 28640841)@CCT motif family protein, expressed -
6 Sobic.001G507000 expressed protein -
7 Sobic.005G138500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.005G068800 TOPBP1A - Similar to DNA replication protein TOPBP1 from, expressed K10728: topoisomerase (DNA) II binding protein 1
9 Sobic.006G034300 Transketolase(PubMedID : 26186930)@"Transketolase, putative (Os)"(PubMedID : 27208977)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@transketolase, chloroplast precursor, putative, expressed K00615: E2.2.1.1, tktA, transketolase
10 Sobic.003G194400 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
11 Sobic.006G114700 Up-reguralion under drought(PubMedID : 24916767)@phosphofructokinase 2("PubMedID : 26759170,PubMedID : 24597475")@phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
12 Sobic.002G131100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@N-rich protein, putative, expressed -
13 Sobic.009G171400 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
14 Sobic.008G116100 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed K13832: aroDE, 3-dehydroquinate dehydratase / shikimate dehydrogenase
15 Sobic.003G019300 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.005G183200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@14-3-3 protein, putative, expressed K06630: 14-3-3 protein epsilon
17 Sobic.003G226300 Ceramidase family protein (At)(PubMedID : 27208977)@neutral ceramidase precursor, putative, expressed K12349: neutral ceramidase
18 Sobic.010G101300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@dehydrogenase E1 component domain containing protein, expressed K00161: PDHA, pyruvate dehydrogenase E1 component alpha subunit
19 Sobic.010G155100 NAC domain containing protein, putative, expressed -
20 Sobic.003G430100 Phosphoesterase family protein(PubMedID : 24906815)@phosphoesterase family protein, putative, expressed K01114: phospholipase C


Gene co-expression network
sample Sobic001G401900 Sobic001G401900 Sobic001G396900 Sobic001G396900 Sobic001G401900--Sobic001G396900 Sobic004G243300 Sobic004G243300 Sobic001G401900--Sobic004G243300 Sobic009G148000 Sobic009G148000 Sobic001G401900--Sobic009G148000 Sobic005G165800 Sobic005G165800 Sobic001G401900--Sobic005G165800 Sobic010G250100 Sobic010G250100 Sobic001G401900--Sobic010G250100 Sobic001G507000 Sobic001G507000 Sobic001G401900--Sobic001G507000 Sobic005G138500 Sobic005G138500 Sobic001G401900--Sobic005G138500 Sobic005G068800 Sobic005G068800 Sobic001G401900--Sobic005G068800 Sobic006G034300 Sobic006G034300 Sobic001G401900--Sobic006G034300 Sobic001G396900--Sobic005G138500 Sobic004G114600 Sobic004G114600 Sobic001G396900--Sobic004G114600 Sobic001G396900--Sobic006G034300 Sobic001G396900--Sobic005G165800 Sobic009G171400 Sobic009G171400 Sobic001G396900--Sobic009G171400 Sobic002G413200 Sobic002G413200 Sobic001G396900--Sobic002G413200 Sobic003G011000 Sobic003G011000 Sobic001G396900--Sobic003G011000 Sobic006G050600 Sobic006G050600 Sobic001G396900--Sobic006G050600 Sobic007G153600 Sobic007G153600 Sobic001G396900--Sobic007G153600 Sobic003G194400 Sobic003G194400 Sobic004G243300--Sobic003G194400 Sobic010G101300 Sobic010G101300 Sobic004G243300--Sobic010G101300 Sobic003G292400 Sobic003G292400 Sobic004G243300--Sobic003G292400 Sobic001G200700 Sobic001G200700 Sobic004G243300--Sobic001G200700 Sobic004G243300--Sobic009G171400 Sobic006G114700 Sobic006G114700 Sobic004G243300--Sobic006G114700 Sobic004G047900 Sobic004G047900 Sobic004G243300--Sobic004G047900 Sobic004G243300--Sobic005G138500 Sobic006G269501 Sobic006G269501 Sobic004G243300--Sobic006G269501 Sobic002G343000 Sobic002G343000 Sobic009G148000--Sobic002G343000 Sobic002G253900 Sobic002G253900 Sobic009G148000--Sobic002G253900 Sobic006G200901 Sobic006G200901 Sobic009G148000--Sobic006G200901 Sobic006G186300 Sobic006G186300 Sobic009G148000--Sobic006G186300 Sobic003G217500 Sobic003G217500 Sobic009G148000--Sobic003G217500 Sobic001G005800 Sobic001G005800 Sobic009G148000--Sobic001G005800 Sobic004G014100 Sobic004G014100 Sobic009G148000--Sobic004G014100 Sobic008G041900 Sobic008G041900 Sobic009G148000--Sobic008G041900 Sobic004G250600 Sobic004G250600 Sobic009G148000--Sobic004G250600 Sobic005G165800--Sobic001G396900 Sobic005G165800--Sobic004G114600 Sobic006G208000 Sobic006G208000 Sobic005G165800--Sobic006G208000 Sobic005G165800--Sobic006G034300 Sobic005G165800--Sobic002G413200 Sobic004G281700 Sobic004G281700 Sobic005G165800--Sobic004G281700 Sobic001G044300 Sobic001G044300 Sobic005G165800--Sobic001G044300 Sobic003G419500 Sobic003G419500 Sobic005G165800--Sobic003G419500 Sobic010G131500 Sobic010G131500 Sobic005G165800--Sobic010G131500 Sobic002G252900 Sobic002G252900 Sobic010G250100--Sobic002G252900 Sobic009G102900 Sobic009G102900 Sobic010G250100--Sobic009G102900 Sobic003G222200 Sobic003G222200 Sobic010G250100--Sobic003G222200 Sobic010G088300 Sobic010G088300 Sobic010G250100--Sobic010G088300 Sobic001G115500 Sobic001G115500 Sobic010G250100--Sobic001G115500 Sobic003G307900 Sobic003G307900 Sobic010G250100--Sobic003G307900 Sobic009G030400 Sobic009G030400 Sobic010G250100--Sobic009G030400 Sobic006G109500 Sobic006G109500 Sobic010G250100--Sobic006G109500 Sobic010G250100--Sobic001G401900 Sobic001G507000--Sobic005G068800 Sobic004G321400 Sobic004G321400 Sobic001G507000--Sobic004G321400 Sobic003G183700 Sobic003G183700 Sobic001G507000--Sobic003G183700 Sobic001G146900 Sobic001G146900 Sobic001G507000--Sobic001G146900 Sobic006G120600 Sobic006G120600 Sobic001G507000--Sobic006G120600 Sobic004G156200 Sobic004G156200 Sobic001G507000--Sobic004G156200 Sobic006G195500 Sobic006G195500 Sobic001G507000--Sobic006G195500 Sobic004G095200 Sobic004G095200 Sobic001G507000--Sobic004G095200 Sobic009G087000 Sobic009G087000 Sobic001G507000--Sobic009G087000 Sobic005G138500--Sobic006G269501 Sobic005G138500--Sobic001G396900 Sobic005G138500--Sobic009G171400 Sobic005G138500--Sobic002G413200 Sobic005G138500--Sobic004G114600 Sobic005G138500--Sobic006G050600 Sobic002G143300 Sobic002G143300 Sobic005G138500--Sobic002G143300 Sobic005G138500--Sobic006G034300 Sobic005G138500--Sobic004G243300 Sobic005G068800--Sobic001G507000 Sobic005G068800--Sobic004G156200 Sobic005G068800--Sobic004G095200 Sobic005G068800--Sobic006G120600 Sobic009G146250 Sobic009G146250 Sobic005G068800--Sobic009G146250 Sobic005G068800--Sobic006G195500 Sobic005G068800--Sobic003G183700 Sobic002G021200 Sobic002G021200 Sobic005G068800--Sobic002G021200 Sobic009G052100 Sobic009G052100 Sobic005G068800--Sobic009G052100 Sobic006G034300--Sobic003G011000 Sobic006G034300--Sobic001G396900 Sobic006G034300--Sobic004G114600 Sobic006G034300--Sobic005G165800 Sobic006G034300--Sobic009G171400 Sobic006G034300--Sobic005G138500 Sobic006G034300--Sobic002G413200 Sobic006G034300--Sobic006G050600 Sobic006G034300--Sobic006G208000
Octagon: transcription factors


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