Gene annotation
Transcriptome id Sobic.003G222200.1
Synonym Sb03g028050
Functional annotation oxidoreductase, aldo/keto reductase family protein, putative, expressed
UniProt A0A1B6Q4Q3
Pfam PF00248
Panther DB PTHR11732 PTHR11732:SF253
NCBI CDD KOG1575; Voltage-gated shaker-like K+ channel, subunit beta/KCNAB
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G60690 : NAD(P)-linked oxidoreductase superfamily protein
RAP-DB (Rice) LOC_Os01g43090.1 : oxidoreductase, aldo/keto reductase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a038451 , Zm00025a038544 , Zm00025a028397
Brachypodium KQK08750
Barley HORVU3Hr1G054640.4 , HORVU3Hr1G054640.5 , HORVU3Hr1G054640.2 , HORVU3Hr1G054640.3 , HORVU3Hr1G054640.1
Wheat TraesCS5D02G336900 , TraesCS7D02G186400 , TraesCS7D02G186400 , TraesCS7A02G184900 , TraesCS3A02G222900 , TraesCS7B02G090000 , TraesCS3D02G230600 , TraesCS3B02G252400 , TraesCS7B02G089600 , TraesCS5A02G331200 , TraesCS7A02G185000 , TraesCS7B02G089800
Populus -


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cDNA sequences
Sobic.003G222200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G250100 "CIL, CIA2 like (Chloroplast import apparatus)"(PubMedID : 28640841)@CCT motif family protein, expressed -
2 Sobic.001G442700 cyclin-J18-like, putative, expressed -
3 Sobic.009G073400 galactosyltransferase family protein, putative, expressed -
4 Sobic.006G172200 glycosyl transferase 8 domain containing protein, putative, expressed -
5 Sobic.001G235700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@translin, putative, expressed -
6 Sobic.001G123100 Os3bglu8 - beta-glucosidase, exo-beta-glucansase, high similarity to Os3bglu7, expressed K05350: beta-glucosidase
7 Sobic.010G079100 lysM domain-containing GPI-anchored protein 1 precursor, putative, expressed -
8 Sobic.001G157600 WD domain, G-beta repeat domain containing protein, expressed K10752: RBBP4, HAT2, CAF1, histone-binding protein RBBP4
9 Sobic.001G507000 expressed protein -
10 Sobic.004G208100 expressed protein -
11 Sobic.007G036800 xylosyltransferase, putative, expressed -
12 Sobic.003G345200 protein kinase family protein, putative, expressed -
13 Sobic.002G351700 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
14 Sobic.010G021900 rad1, putative, expressed K02830: HRAD1, cell cycle checkpoint protein
15 Sobic.003G312400 dymeclin, putative, expressed -
16 Sobic.002G303800 expressed protein -
17 Sobic.004G146300 AP003256-AK101847 - NBS/LRR genes that are S-rich,divergent TIR, divergent NBS, expressed -
18 Sobic.002G133000 delta14-sterol reductase, putative, expressed K00222: TM7SF2, Delta14-sterol reductase
19 Sobic.004G145300 OsFBD12 - F-box and FBD domain containing protein, expressed -
20 Sobic.001G369800 monocopper oxidase, putative, expressed -


Gene co-expression network
sample Sobic003G222200 Sobic003G222200 Sobic010G250100 Sobic010G250100 Sobic003G222200--Sobic010G250100 Sobic001G442700 Sobic001G442700 Sobic003G222200--Sobic001G442700 Sobic009G073400 Sobic009G073400 Sobic003G222200--Sobic009G073400 Sobic006G172200 Sobic006G172200 Sobic003G222200--Sobic006G172200 Sobic001G235700 Sobic001G235700 Sobic003G222200--Sobic001G235700 Sobic001G123100 Sobic001G123100 Sobic003G222200--Sobic001G123100 Sobic010G079100 Sobic010G079100 Sobic003G222200--Sobic010G079100 Sobic001G157600 Sobic001G157600 Sobic003G222200--Sobic001G157600 Sobic001G507000 Sobic001G507000 Sobic003G222200--Sobic001G507000 Sobic002G252900 Sobic002G252900 Sobic010G250100--Sobic002G252900 Sobic009G102900 Sobic009G102900 Sobic010G250100--Sobic009G102900 Sobic010G250100--Sobic003G222200 Sobic010G088300 Sobic010G088300 Sobic010G250100--Sobic010G088300 Sobic001G115500 Sobic001G115500 Sobic010G250100--Sobic001G115500 Sobic003G307900 Sobic003G307900 Sobic010G250100--Sobic003G307900 Sobic009G030400 Sobic009G030400 Sobic010G250100--Sobic009G030400 Sobic006G109500 Sobic006G109500 Sobic010G250100--Sobic006G109500 Sobic001G401900 Sobic001G401900 Sobic010G250100--Sobic001G401900 Sobic001G442700--Sobic003G222200 Sobic004G146300 Sobic004G146300 Sobic001G442700--Sobic004G146300 Sobic001G442700--Sobic009G073400 Sobic001G150033 Sobic001G150033 Sobic001G442700--Sobic001G150033 Sobic003G345200 Sobic003G345200 Sobic001G442700--Sobic003G345200 Sobic010G168900 Sobic010G168900 Sobic001G442700--Sobic010G168900 Sobic001G442700--Sobic006G172200 Sobic006G140100 Sobic006G140100 Sobic001G442700--Sobic006G140100 Sobic004G119700 Sobic004G119700 Sobic001G442700--Sobic004G119700 Sobic009G061000 Sobic009G061000 Sobic009G073400--Sobic009G061000 Sobic009G073400--Sobic003G345200 Sobic003G017500 Sobic003G017500 Sobic009G073400--Sobic003G017500 Sobic006G173200 Sobic006G173200 Sobic009G073400--Sobic006G173200 Sobic001G159800 Sobic001G159800 Sobic009G073400--Sobic001G159800 Sobic009G073400--Sobic006G172200 Sobic009G073400--Sobic004G146300 Sobic009G206500 Sobic009G206500 Sobic009G073400--Sobic009G206500 Sobic010G090500 Sobic010G090500 Sobic009G073400--Sobic010G090500 Sobic006G172200--Sobic009G073400 Sobic010G054100 Sobic010G054100 Sobic006G172200--Sobic010G054100 Sobic006G144700 Sobic006G144700 Sobic006G172200--Sobic006G144700 Sobic006G172200--Sobic003G345200 Sobic010G067800 Sobic010G067800 Sobic006G172200--Sobic010G067800 Sobic006G172200--Sobic004G119700 Sobic002G214200 Sobic002G214200 Sobic006G172200--Sobic002G214200 Sobic002G351700 Sobic002G351700 Sobic006G172200--Sobic002G351700 Sobic006G172200--Sobic001G507000 Sobic001G097400 Sobic001G097400 Sobic001G235700--Sobic001G097400 Sobic001G436300 Sobic001G436300 Sobic001G235700--Sobic001G436300 Sobic004G208100 Sobic004G208100 Sobic001G235700--Sobic004G208100 Sobic004G190600 Sobic004G190600 Sobic001G235700--Sobic004G190600 Sobic001G440900 Sobic001G440900 Sobic001G235700--Sobic001G440900 Sobic002G303800 Sobic002G303800 Sobic001G235700--Sobic002G303800 Sobic002G133000 Sobic002G133000 Sobic001G235700--Sobic002G133000 Sobic004G343600 Sobic004G343600 Sobic001G235700--Sobic004G343600 Sobic006G127500 Sobic006G127500 Sobic001G235700--Sobic006G127500 Sobic002G284100 Sobic002G284100 Sobic001G123100--Sobic002G284100 Sobic002G253900 Sobic002G253900 Sobic001G123100--Sobic002G253900 Sobic001G369800 Sobic001G369800 Sobic001G123100--Sobic001G369800 Sobic005G143100 Sobic005G143100 Sobic001G123100--Sobic005G143100 Sobic004G145300 Sobic004G145300 Sobic001G123100--Sobic004G145300 Sobic001G123300 Sobic001G123300 Sobic001G123100--Sobic001G123300 Sobic001G540700 Sobic001G540700 Sobic001G123100--Sobic001G540700 Sobic002G006100 Sobic002G006100 Sobic001G123100--Sobic002G006100 Sobic003G224700 Sobic003G224700 Sobic001G123100--Sobic003G224700 Sobic003G289800 Sobic003G289800 Sobic010G079100--Sobic003G289800 Sobic003G412800 Sobic003G412800 Sobic010G079100--Sobic003G412800 Sobic010G079100--Sobic001G369800 Sobic009G172950 Sobic009G172950 Sobic010G079100--Sobic009G172950 Sobic003G389100 Sobic003G389100 Sobic010G079100--Sobic003G389100 Sobic001G169800 Sobic001G169800 Sobic010G079100--Sobic001G169800 Sobic003G183700 Sobic003G183700 Sobic010G079100--Sobic003G183700 Sobic001G051300 Sobic001G051300 Sobic010G079100--Sobic001G051300 Sobic003G179500 Sobic003G179500 Sobic010G079100--Sobic003G179500 Sobic010G256200 Sobic010G256200 Sobic001G157600--Sobic010G256200 Sobic006G245700 Sobic006G245700 Sobic001G157600--Sobic006G245700 Sobic001G157600--Sobic006G127500 Sobic001G157600--Sobic004G145300 Sobic001G157600--Sobic001G436300 Sobic001G157600--Sobic001G115500 Sobic010G154000 Sobic010G154000 Sobic001G157600--Sobic010G154000 Sobic002G306600 Sobic002G306600 Sobic001G157600--Sobic002G306600 Sobic009G002000 Sobic009G002000 Sobic001G157600--Sobic009G002000 Sobic005G068800 Sobic005G068800 Sobic001G507000--Sobic005G068800 Sobic004G321400 Sobic004G321400 Sobic001G507000--Sobic004G321400 Sobic001G507000--Sobic003G183700 Sobic001G146900 Sobic001G146900 Sobic001G507000--Sobic001G146900 Sobic006G120600 Sobic006G120600 Sobic001G507000--Sobic006G120600 Sobic004G156200 Sobic004G156200 Sobic001G507000--Sobic004G156200 Sobic006G195500 Sobic006G195500 Sobic001G507000--Sobic006G195500 Sobic004G095200 Sobic004G095200 Sobic001G507000--Sobic004G095200 Sobic009G087000 Sobic009G087000 Sobic001G507000--Sobic009G087000
Octagon: transcription factors


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