Gene annotation
Transcriptome id Sobic.001G442700.3,Sobic.001G442700.4,Sobic.001G442700.2
Synonym Sb01g041600, CYCJ18
Functional annotation cyclin-J18-like, putative, expressed
UniProt A0A1Z5SAK1 , C5WRL1
Pfam -
Panther DB PTHR10177 PTHR10177:SF256
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G01905 : cyclin J18
RAP-DB (Rice) LOC_Os03g13480.1 : cyclin-J18-like, putative, expressed
MaizeGDB (Corn) Zm00025a001496
Brachypodium -
Barley -
Wheat TraesCS4A02G074100 , TraesCS4B02G230300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G222200 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
2 Sobic.004G146300 AP003256-AK101847 - NBS/LRR genes that are S-rich,divergent TIR, divergent NBS, expressed -
3 Sobic.009G073400 galactosyltransferase family protein, putative, expressed -
4 Sobic.001G150033 - -
5 Sobic.003G345200 protein kinase family protein, putative, expressed -
6 Sobic.010G168900 transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
7 Sobic.006G172200 glycosyl transferase 8 domain containing protein, putative, expressed -
8 Sobic.006G140100 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
9 Sobic.004G119700 WD repeat-containing protein, putative, expressed K03363: cell division cycle 20, cofactor of APC complex
10 Sobic.010G032700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase domain containing protein, expressed K11434: type I protein arginine methyltransferase
11 Sobic.001G116000 dynamin family protein, putative, expressed K01528: dynamin 1/3
12 Sobic.009G001200 zinc finger, C3HC4 type domain containing protein, expressed K10638: UHRF1, E3 ubiquitin-protein ligase UHRF1
13 Sobic.003G084300 mediator of RNA polymerase II transcription subunit 22, putative, expressed K15139: mediator of RNA polymerase II transcription subunit 22
14 Sobic.001G051300 BEE 1, putative, expressed -
15 Sobic.006G109500 aldehyde dehydrogenase, putative, expressed K00130: betB, betaine-aldehyde dehydrogenase
16 Sobic.004G208100 expressed protein -
17 Sobic.001G401600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
18 Sobic.002G319200 expressed protein K11490: condensin-2 complex subunit H2
19 Sobic.002G280700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WD domain, G-beta repeat domain containing protein, expressed K10752: RBBP4, HAT2, CAF1, histone-binding protein RBBP4
20 Sobic.003G412800 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -


Gene co-expression network
sample Sobic001G442700 Sobic001G442700 Sobic003G222200 Sobic003G222200 Sobic001G442700--Sobic003G222200 Sobic004G146300 Sobic004G146300 Sobic001G442700--Sobic004G146300 Sobic009G073400 Sobic009G073400 Sobic001G442700--Sobic009G073400 Sobic001G150033 Sobic001G150033 Sobic001G442700--Sobic001G150033 Sobic003G345200 Sobic003G345200 Sobic001G442700--Sobic003G345200 Sobic010G168900 Sobic010G168900 Sobic001G442700--Sobic010G168900 Sobic006G172200 Sobic006G172200 Sobic001G442700--Sobic006G172200 Sobic006G140100 Sobic006G140100 Sobic001G442700--Sobic006G140100 Sobic004G119700 Sobic004G119700 Sobic001G442700--Sobic004G119700 Sobic010G250100 Sobic010G250100 Sobic003G222200--Sobic010G250100 Sobic003G222200--Sobic001G442700 Sobic003G222200--Sobic009G073400 Sobic003G222200--Sobic006G172200 Sobic001G235700 Sobic001G235700 Sobic003G222200--Sobic001G235700 Sobic001G123100 Sobic001G123100 Sobic003G222200--Sobic001G123100 Sobic010G079100 Sobic010G079100 Sobic003G222200--Sobic010G079100 Sobic001G157600 Sobic001G157600 Sobic003G222200--Sobic001G157600 Sobic001G507000 Sobic001G507000 Sobic003G222200--Sobic001G507000 Sobic004G146300--Sobic009G073400 Sobic010G250800 Sobic010G250800 Sobic004G146300--Sobic010G250800 Sobic009G001200 Sobic009G001200 Sobic004G146300--Sobic009G001200 Sobic010G252700 Sobic010G252700 Sobic004G146300--Sobic010G252700 Sobic001G122100 Sobic001G122100 Sobic004G146300--Sobic001G122100 Sobic004G146300--Sobic001G442700 Sobic004G146300--Sobic003G345200 Sobic009G013000 Sobic009G013000 Sobic004G146300--Sobic009G013000 Sobic009G167100 Sobic009G167100 Sobic004G146300--Sobic009G167100 Sobic009G061000 Sobic009G061000 Sobic009G073400--Sobic009G061000 Sobic009G073400--Sobic003G345200 Sobic003G017500 Sobic003G017500 Sobic009G073400--Sobic003G017500 Sobic006G173200 Sobic006G173200 Sobic009G073400--Sobic006G173200 Sobic001G159800 Sobic001G159800 Sobic009G073400--Sobic001G159800 Sobic009G073400--Sobic006G172200 Sobic009G073400--Sobic004G146300 Sobic009G206500 Sobic009G206500 Sobic009G073400--Sobic009G206500 Sobic010G090500 Sobic010G090500 Sobic009G073400--Sobic010G090500 Sobic001G412500 Sobic001G412500 Sobic001G150033--Sobic001G412500 Sobic001G150033--Sobic001G442700 Sobic002G267600 Sobic002G267600 Sobic001G150033--Sobic002G267600 Sobic001G282000 Sobic001G282000 Sobic001G150033--Sobic001G282000 Sobic006G029400 Sobic006G029400 Sobic001G150033--Sobic006G029400 Sobic001G116000 Sobic001G116000 Sobic001G150033--Sobic001G116000 Sobic001G150033--Sobic010G168900 Sobic003G084300 Sobic003G084300 Sobic001G150033--Sobic003G084300 Sobic009G189200 Sobic009G189200 Sobic001G150033--Sobic009G189200 Sobic003G345200--Sobic009G073400 Sobic009G151700 Sobic009G151700 Sobic003G345200--Sobic009G151700 Sobic010G054600 Sobic010G054600 Sobic003G345200--Sobic010G054600 Sobic003G345200--Sobic006G172200 Sobic003G345200--Sobic009G001200 Sobic003G345200--Sobic004G119700 Sobic003G345200--Sobic009G206500 Sobic010G067800 Sobic010G067800 Sobic003G345200--Sobic010G067800 Sobic003G345200--Sobic006G140100 Sobic010G168900--Sobic001G116000 Sobic003G312400 Sobic003G312400 Sobic010G168900--Sobic003G312400 Sobic003G412800 Sobic003G412800 Sobic010G168900--Sobic003G412800 Sobic007G044400 Sobic007G044400 Sobic010G168900--Sobic007G044400 Sobic004G208100 Sobic004G208100 Sobic010G168900--Sobic004G208100 Sobic009G119700 Sobic009G119700 Sobic010G168900--Sobic009G119700 Sobic010G168900--Sobic001G412500 Sobic010G168900--Sobic001G122100 Sobic001G026600 Sobic001G026600 Sobic010G168900--Sobic001G026600 Sobic006G172200--Sobic009G073400 Sobic010G054100 Sobic010G054100 Sobic006G172200--Sobic010G054100 Sobic006G144700 Sobic006G144700 Sobic006G172200--Sobic006G144700 Sobic006G172200--Sobic003G345200 Sobic006G172200--Sobic010G067800 Sobic006G172200--Sobic004G119700 Sobic002G214200 Sobic002G214200 Sobic006G172200--Sobic002G214200 Sobic002G351700 Sobic002G351700 Sobic006G172200--Sobic002G351700 Sobic006G172200--Sobic001G507000 Sobic007G152900 Sobic007G152900 Sobic006G140100--Sobic007G152900 Sobic006G140100--Sobic010G054600 Sobic006G116500 Sobic006G116500 Sobic006G140100--Sobic006G116500 Sobic001G070300 Sobic001G070300 Sobic006G140100--Sobic001G070300 Sobic004G197400 Sobic004G197400 Sobic006G140100--Sobic004G197400 Sobic004G355500 Sobic004G355500 Sobic006G140100--Sobic004G355500 Sobic001G142000 Sobic001G142000 Sobic006G140100--Sobic001G142000 Sobic009G214100 Sobic009G214100 Sobic006G140100--Sobic009G214100 Sobic002G280700 Sobic002G280700 Sobic006G140100--Sobic002G280700 Sobic004G270800 Sobic004G270800 Sobic004G119700--Sobic004G270800 Sobic004G119700--Sobic010G054600 Sobic004G119700--Sobic001G142000 Sobic003G369200 Sobic003G369200 Sobic004G119700--Sobic003G369200 Sobic008G129200 Sobic008G129200 Sobic004G119700--Sobic008G129200 Sobic010G147700 Sobic010G147700 Sobic004G119700--Sobic010G147700 Sobic004G331600 Sobic004G331600 Sobic004G119700--Sobic004G331600 Sobic005G110535 Sobic005G110535 Sobic004G119700--Sobic005G110535 Sobic009G087000 Sobic009G087000 Sobic004G119700--Sobic009G087000
Octagon: transcription factors


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