Gene annotation
Transcriptome id Sobic.001G150033.1
Synonym -
Functional annotation -
UniProt A0A1Z5S5P2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G412500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K18732: SARNP, CIP29, SAP domain-containing ribonucleoprotein
2 Sobic.001G442700 cyclin-J18-like, putative, expressed -
3 Sobic.002G267600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
4 Sobic.001G282000 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
5 Sobic.006G029400 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.001G116000 dynamin family protein, putative, expressed K01528: dynamin 1/3
7 Sobic.010G168900 transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
8 Sobic.003G084300 mediator of RNA polymerase II transcription subunit 22, putative, expressed K15139: mediator of RNA polymerase II transcription subunit 22
9 Sobic.009G189200 secretory carrier-associated membrane protein, putative, expressed -
10 Sobic.010G060600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
11 Sobic.002G184900 SCO1 protein homolog, mitochondrial precursor, putative, expressed K07152: protein SCO1
12 Sobic.001G528600 remorin family protein, putative, expressed -
13 Sobic.001G081900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@semialdehyde dehydrogenase, NAD binding domain containing protein, putative, expressed K00133: aspartate-semialdehyde dehydrogenase
14 Sobic.004G272200 secretory carrier-associated membrane protein, putative, expressed -
15 Sobic.001G402600 expressed protein -
16 Sobic.004G343600 3-5 exoribonuclease CSL4, putative, expressed K07573: CSL4, exosome complex component CSL4
17 Sobic.002G297600 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
18 Sobic.001G026600 - -
19 Sobic.001G099100 endoglucanase, putative, expressed K01179: endoglucanase
20 Sobic.007G073600 expressed protein K16585: HAUS augmin-like complex subunit 2


Gene co-expression network
sample Sobic001G150033 Sobic001G150033 Sobic001G412500 Sobic001G412500 Sobic001G150033--Sobic001G412500 Sobic001G442700 Sobic001G442700 Sobic001G150033--Sobic001G442700 Sobic002G267600 Sobic002G267600 Sobic001G150033--Sobic002G267600 Sobic001G282000 Sobic001G282000 Sobic001G150033--Sobic001G282000 Sobic006G029400 Sobic006G029400 Sobic001G150033--Sobic006G029400 Sobic001G116000 Sobic001G116000 Sobic001G150033--Sobic001G116000 Sobic010G168900 Sobic010G168900 Sobic001G150033--Sobic010G168900 Sobic003G084300 Sobic003G084300 Sobic001G150033--Sobic003G084300 Sobic009G189200 Sobic009G189200 Sobic001G150033--Sobic009G189200 Sobic009G165500 Sobic009G165500 Sobic001G412500--Sobic009G165500 Sobic001G412500--Sobic003G084300 Sobic004G343600 Sobic004G343600 Sobic001G412500--Sobic004G343600 Sobic006G013900 Sobic006G013900 Sobic001G412500--Sobic006G013900 Sobic004G208100 Sobic004G208100 Sobic001G412500--Sobic004G208100 Sobic001G107300 Sobic001G107300 Sobic001G412500--Sobic001G107300 Sobic001G412500--Sobic001G150033 Sobic001G261549 Sobic001G261549 Sobic001G412500--Sobic001G261549 Sobic001G528600 Sobic001G528600 Sobic001G412500--Sobic001G528600 Sobic003G222200 Sobic003G222200 Sobic001G442700--Sobic003G222200 Sobic004G146300 Sobic004G146300 Sobic001G442700--Sobic004G146300 Sobic009G073400 Sobic009G073400 Sobic001G442700--Sobic009G073400 Sobic001G442700--Sobic001G150033 Sobic003G345200 Sobic003G345200 Sobic001G442700--Sobic003G345200 Sobic001G442700--Sobic010G168900 Sobic006G172200 Sobic006G172200 Sobic001G442700--Sobic006G172200 Sobic006G140100 Sobic006G140100 Sobic001G442700--Sobic006G140100 Sobic004G119700 Sobic004G119700 Sobic001G442700--Sobic004G119700 Sobic008G163400 Sobic008G163400 Sobic002G267600--Sobic008G163400 Sobic003G239000 Sobic003G239000 Sobic002G267600--Sobic003G239000 Sobic001G149100 Sobic001G149100 Sobic002G267600--Sobic001G149100 Sobic007G031300 Sobic007G031300 Sobic002G267600--Sobic007G031300 Sobic003G299200 Sobic003G299200 Sobic002G267600--Sobic003G299200 Sobic008G179000 Sobic008G179000 Sobic002G267600--Sobic008G179000 Sobic002G267600--Sobic004G208100 Sobic001G408300 Sobic001G408300 Sobic002G267600--Sobic001G408300 Sobic004G047500 Sobic004G047500 Sobic002G267600--Sobic004G047500 Sobic004G242000 Sobic004G242000 Sobic001G282000--Sobic004G242000 Sobic001G282000--Sobic001G150033 Sobic001G282000--Sobic003G345200 Sobic001G282000--Sobic003G222200 Sobic009G151700 Sobic009G151700 Sobic001G282000--Sobic009G151700 Sobic001G282000--Sobic009G073400 Sobic010G265900 Sobic010G265900 Sobic001G282000--Sobic010G265900 Sobic001G282000--Sobic001G412500 Sobic001G282000--Sobic001G442700 Sobic002G297600 Sobic002G297600 Sobic006G029400--Sobic002G297600 Sobic004G075200 Sobic004G075200 Sobic006G029400--Sobic004G075200 Sobic002G254500 Sobic002G254500 Sobic006G029400--Sobic002G254500 Sobic009G041800 Sobic009G041800 Sobic006G029400--Sobic009G041800 Sobic001G413100 Sobic001G413100 Sobic006G029400--Sobic001G413100 Sobic002G399900 Sobic002G399900 Sobic006G029400--Sobic002G399900 Sobic001G035400 Sobic001G035400 Sobic006G029400--Sobic001G035400 Sobic003G008600 Sobic003G008600 Sobic006G029400--Sobic003G008600 Sobic002G264300 Sobic002G264300 Sobic006G029400--Sobic002G264300 Sobic001G196100 Sobic001G196100 Sobic001G116000--Sobic001G196100 Sobic001G116000--Sobic001G035400 Sobic007G044400 Sobic007G044400 Sobic001G116000--Sobic007G044400 Sobic007G048700 Sobic007G048700 Sobic001G116000--Sobic007G048700 Sobic002G313600 Sobic002G313600 Sobic001G116000--Sobic002G313600 Sobic008G084100 Sobic008G084100 Sobic001G116000--Sobic008G084100 Sobic001G026600 Sobic001G026600 Sobic001G116000--Sobic001G026600 Sobic004G031800 Sobic004G031800 Sobic001G116000--Sobic004G031800 Sobic004G184000 Sobic004G184000 Sobic001G116000--Sobic004G184000 Sobic010G168900--Sobic001G116000 Sobic003G312400 Sobic003G312400 Sobic010G168900--Sobic003G312400 Sobic003G412800 Sobic003G412800 Sobic010G168900--Sobic003G412800 Sobic010G168900--Sobic007G044400 Sobic010G168900--Sobic004G208100 Sobic009G119700 Sobic009G119700 Sobic010G168900--Sobic009G119700 Sobic010G168900--Sobic001G412500 Sobic001G122100 Sobic001G122100 Sobic010G168900--Sobic001G122100 Sobic010G168900--Sobic001G026600 Sobic001G157800 Sobic001G157800 Sobic003G084300--Sobic001G157800 Sobic003G084300--Sobic009G165500 Sobic003G084300--Sobic009G189200 Sobic003G011100 Sobic003G011100 Sobic003G084300--Sobic003G011100 Sobic002G385400 Sobic002G385400 Sobic003G084300--Sobic002G385400 Sobic003G084300--Sobic010G265900 Sobic002G258300 Sobic002G258300 Sobic003G084300--Sobic002G258300 Sobic006G200000 Sobic006G200000 Sobic003G084300--Sobic006G200000 Sobic006G102900 Sobic006G102900 Sobic003G084300--Sobic006G102900 Sobic009G189200--Sobic006G102900 Sobic009G189200--Sobic001G261549 Sobic002G057500 Sobic002G057500 Sobic009G189200--Sobic002G057500 Sobic010G144900 Sobic010G144900 Sobic009G189200--Sobic010G144900 Sobic009G189200--Sobic007G044400 Sobic004G285900 Sobic004G285900 Sobic009G189200--Sobic004G285900 Sobic009G189200--Sobic003G084300 Sobic003G122200 Sobic003G122200 Sobic009G189200--Sobic003G122200 Sobic001G131600 Sobic001G131600 Sobic009G189200--Sobic001G131600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.