Gene annotation
Transcriptome id Sobic.006G160000.1
Synonym
Functional annotation leucine-rich repeat family protein, putative, expressed
UniProt A0A1B6PMA0
Pfam PF13855 PF08263 PF07714
Panther DB PTHR27000 PTHR27000:SF175
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G63430 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os04g45170.1 : leucine-rich repeat family protein, putative, expressed
MaizeGDB (Corn) Zm00025a010435
Brachypodium KQJ83781
Barley HORVU2Hr1G091840.25 , HORVU2Hr1G091840.24 , HORVU2Hr1G091840.27 , HORVU2Hr1G091840.26 , HORVU2Hr1G091840.21 , HORVU2Hr1G091840.20 , HORVU2Hr1G091840.23 , HORVU2Hr1G091840.22 , HORVU2Hr1G091840.29 , HORVU2Hr1G091840.28 , HORVU2Hr1G091840.32 , HORVU2Hr1G091840.30 , HORVU2Hr1G091840.31 , HORVU2Hr1G091840.2 , HORVU2Hr1G091840.3 , HORVU2Hr1G091840.9 , HORVU2Hr1G091840.11 , HORVU2Hr1G091840.16 , HORVU2Hr1G091840.17 , HORVU2Hr1G091840.18 , HORVU2Hr1G091840.19
Wheat TraesCS2A02G368700 , TraesCS2A02G368700 , TraesCS2B02G385900
Populus -


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cDNA sequences
Sobic.006G160000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G187200 rhoGAP domain containing protein, expressed -
2 Sobic.002G153100 "bZIP, coexpress with genes associated with the hormonesignaling pathway, anther develop-ment in Arabidopsis"(PubMedID : 28944535)@transcription factor, putative, expressed K14431: transcription factor TGA
3 Sobic.003G086500 expressed protein -
4 Sobic.004G079700 metal cation transporter, putative, expressed K07238: TC.ZIP, zupT, ZRT3, zinc transporter, ZIP family
5 Sobic.006G109500 aldehyde dehydrogenase, putative, expressed K00130: betB, betaine-aldehyde dehydrogenase
6 Sobic.006G018300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
7 Sobic.001G203700 formin-like protein 6 precursor, putative, expressed -
8 Sobic.008G062900 H-BTB8 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
9 Sobic.009G079100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
10 Sobic.001G206300 dof zinc finger domain containing protein, putative, expressed -
11 Sobic.009G102600 DUF640 domain containing protein, putative, expressed -
12 Sobic.002G312700 myosin heavy chain-related, putative, expressed -
13 Sobic.005G180800 thioredoxin domain-containing protein 9, putative, expressed -
14 Sobic.003G368000 OsFBT3 - F-box and tubby domain containing protein, expressed -
15 Sobic.001G460400 expressed protein -
16 Sobic.006G096300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
17 Sobic.008G169800 galactosyltransferase family protein, putative, expressed -
18 Sobic.008G156300 kinase, pfkB family, putative, expressed K00868: pdxK, pyridoxine kinase
19 Sobic.002G372300 HD domain containing protein, putative, expressed -
20 Sobic.002G096900 autophagy-related protein 3, putative, expressed -


Gene co-expression network
sample Sobic006G160000 Sobic006G160000 Sobic006G187200 Sobic006G187200 Sobic006G160000--Sobic006G187200 Sobic002G153100 Sobic002G153100 Sobic006G160000--Sobic002G153100 Sobic003G086500 Sobic003G086500 Sobic006G160000--Sobic003G086500 Sobic004G079700 Sobic004G079700 Sobic006G160000--Sobic004G079700 Sobic006G109500 Sobic006G109500 Sobic006G160000--Sobic006G109500 Sobic006G018300 Sobic006G018300 Sobic006G160000--Sobic006G018300 Sobic001G203700 Sobic001G203700 Sobic006G160000--Sobic001G203700 Sobic008G062900 Sobic008G062900 Sobic006G160000--Sobic008G062900 Sobic009G079100 Sobic009G079100 Sobic006G160000--Sobic009G079100 Sobic006G187200--Sobic008G062900 Sobic003G083600 Sobic003G083600 Sobic006G187200--Sobic003G083600 Sobic006G187200--Sobic006G160000 Sobic001G348800 Sobic001G348800 Sobic006G187200--Sobic001G348800 Sobic006G078100 Sobic006G078100 Sobic006G187200--Sobic006G078100 Sobic001G460400 Sobic001G460400 Sobic006G187200--Sobic001G460400 Sobic001G002800 Sobic001G002800 Sobic006G187200--Sobic001G002800 Sobic007G172500 Sobic007G172500 Sobic006G187200--Sobic007G172500 Sobic001G227850 Sobic001G227850 Sobic006G187200--Sobic001G227850 Sobic004G339800 Sobic004G339800 Sobic002G153100--Sobic004G339800 Sobic002G153100--Sobic006G078100 Sobic005G033000 Sobic005G033000 Sobic002G153100--Sobic005G033000 Sobic008G037900 Sobic008G037900 Sobic002G153100--Sobic008G037900 Sobic010G097200 Sobic010G097200 Sobic002G153100--Sobic010G097200 Sobic003G045600 Sobic003G045600 Sobic002G153100--Sobic003G045600 Sobic001G443100 Sobic001G443100 Sobic002G153100--Sobic001G443100 Sobic007G193200 Sobic007G193200 Sobic002G153100--Sobic007G193200 Sobic001G454900 Sobic001G454900 Sobic002G153100--Sobic001G454900 Sobic004G232600 Sobic004G232600 Sobic003G086500--Sobic004G232600 Sobic005G036300 Sobic005G036300 Sobic003G086500--Sobic005G036300 Sobic003G086500--Sobic006G160000 Sobic003G086500--Sobic006G187200 Sobic003G086500--Sobic001G203700 Sobic002G096900 Sobic002G096900 Sobic003G086500--Sobic002G096900 Sobic003G229800 Sobic003G229800 Sobic003G086500--Sobic003G229800 Sobic005G226000 Sobic005G226000 Sobic003G086500--Sobic005G226000 Sobic001G467500 Sobic001G467500 Sobic003G086500--Sobic001G467500 Sobic006G243500 Sobic006G243500 Sobic004G079700--Sobic006G243500 Sobic002G306700 Sobic002G306700 Sobic004G079700--Sobic002G306700 Sobic004G161900 Sobic004G161900 Sobic004G079700--Sobic004G161900 Sobic003G368000 Sobic003G368000 Sobic004G079700--Sobic003G368000 Sobic004G261500 Sobic004G261500 Sobic004G079700--Sobic004G261500 Sobic004G079700--Sobic001G443100 Sobic004G079700--Sobic007G193200 Sobic005G100800 Sobic005G100800 Sobic004G079700--Sobic005G100800 Sobic004G079700--Sobic005G033000 Sobic002G312700 Sobic002G312700 Sobic006G109500--Sobic002G312700 Sobic002G271300 Sobic002G271300 Sobic006G109500--Sobic002G271300 Sobic003G161500 Sobic003G161500 Sobic006G109500--Sobic003G161500 Sobic006G109500--Sobic007G172500 Sobic010G090500 Sobic010G090500 Sobic006G109500--Sobic010G090500 Sobic006G109500--Sobic009G079100 Sobic009G073400 Sobic009G073400 Sobic006G109500--Sobic009G073400 Sobic008G043500 Sobic008G043500 Sobic006G109500--Sobic008G043500 Sobic003G132500 Sobic003G132500 Sobic006G109500--Sobic003G132500 Sobic006G018300--Sobic002G153100 Sobic006G018300--Sobic003G045600 Sobic001G289400 Sobic001G289400 Sobic006G018300--Sobic001G289400 Sobic006G018300--Sobic006G160000 Sobic004G296700 Sobic004G296700 Sobic006G018300--Sobic004G296700 Sobic007G034600 Sobic007G034600 Sobic006G018300--Sobic007G034600 Sobic002G372300 Sobic002G372300 Sobic006G018300--Sobic002G372300 Sobic006G018300--Sobic005G036300 Sobic007G065500 Sobic007G065500 Sobic006G018300--Sobic007G065500 Sobic010G118300 Sobic010G118300 Sobic001G203700--Sobic010G118300 Sobic001G203700--Sobic003G229800 Sobic002G238500 Sobic002G238500 Sobic001G203700--Sobic002G238500 Sobic002G081700 Sobic002G081700 Sobic001G203700--Sobic002G081700 Sobic007G129000 Sobic007G129000 Sobic001G203700--Sobic007G129000 Sobic002G091000 Sobic002G091000 Sobic001G203700--Sobic002G091000 Sobic001G203700--Sobic005G226000 Sobic001G203700--Sobic003G086500 Sobic003G419400 Sobic003G419400 Sobic001G203700--Sobic003G419400 Sobic005G022500 Sobic005G022500 Sobic008G062900--Sobic005G022500 Sobic008G062900--Sobic001G348800 Sobic008G062900--Sobic001G002800 Sobic006G183900 Sobic006G183900 Sobic008G062900--Sobic006G183900 Sobic001G503000 Sobic001G503000 Sobic008G062900--Sobic001G503000 Sobic006G028400 Sobic006G028400 Sobic008G062900--Sobic006G028400 Sobic005G115300 Sobic005G115300 Sobic008G062900--Sobic005G115300 Sobic007G090472 Sobic007G090472 Sobic008G062900--Sobic007G090472 Sobic003G287200 Sobic003G287200 Sobic008G062900--Sobic003G287200 Sobic009G079100--Sobic010G090500 Sobic003G198500 Sobic003G198500 Sobic009G079100--Sobic003G198500 Sobic009G026101 Sobic009G026101 Sobic009G079100--Sobic009G026101 Sobic004G051300 Sobic004G051300 Sobic009G079100--Sobic004G051300 Sobic007G040301 Sobic007G040301 Sobic009G079100--Sobic007G040301 Sobic007G211600 Sobic007G211600 Sobic009G079100--Sobic007G211600 Sobic001G133900 Sobic001G133900 Sobic009G079100--Sobic001G133900 Sobic009G246700 Sobic009G246700 Sobic009G079100--Sobic009G246700 Sobic009G206500 Sobic009G206500 Sobic009G079100--Sobic009G206500
Octagon: transcription factors


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