Gene annotation
Transcriptome id Sobic.002G372300.4,Sobic.002G372300.5,Sobic.002G372300.3,Sobic.002G372300.2
Synonym Sb02g039080, AT-RSH2, RSH2, ATRSH2
Functional annotation HD domain containing protein, putative, expressed
UniProt A0A1W0W774 , A0A1W0W754
Pfam PF01966 PF04607 PF13328 PF04607
Panther DB PTHR21262 PTHR21262:SF15
NCBI CDD KOG1157; Predicted guanosine polyphosphate pyrophosphohydrolase/synthase
KEGG Orthology -
Gene Ontology GO:0015969; guanosine tetraphosphate metabolic process


Orthologs (automatic annotation)
TAIR AT3G14050 : RELA/SPOT homolog 3,RELA/SPOT homolog 2
RAP-DB (Rice) LOC_Os07g42160.1 : HD domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a048737
Brachypodium -
Barley HORVU2Hr1G031740.7 , HORVU2Hr1G031740.6 , HORVU2Hr1G031740.5 , HORVU2Hr1G031740.4 , HORVU2Hr1G031740.3 , HORVU2Hr1G031740.2 , HORVU2Hr1G031740.1 , HORVU2Hr1G031740.8
Wheat TraesCS2B02G197300 , TraesCS2D02G178600 , TraesCS2A02G170900 , TraesCS2A02G170900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G294400 CAMK_CAMK_like.41 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
2 Sobic.001G090000 expressed protein -
3 Sobic.006G220500 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase
4 Sobic.003G227700 cytochrome P450 72A1, putative, expressed -
5 Sobic.006G018300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
6 Sobic.003G127100 peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.008G037900 transcription factor, putative, expressed K14431: transcription factor TGA
8 Sobic.005G211400 cytochrome P450, putative, expressed -
9 Sobic.003G019700 GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.003G095400 glycosyltransferase protein, putative, expressed -
11 Sobic.001G127300 - -
12 Sobic.009G236100 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
13 Sobic.003G432100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD kinase, putative, expressed K00858: ppnK, NAD+ kinase
14 Sobic.002G362900 IBS1, putative, expressed -
15 Sobic.006G160000 leucine-rich repeat family protein, putative, expressed -
16 Sobic.009G102600 DUF640 domain containing protein, putative, expressed -
17 Sobic.004G079700 metal cation transporter, putative, expressed K07238: TC.ZIP, zupT, ZRT3, zinc transporter, ZIP family
18 Sobic.002G153100 "bZIP, coexpress with genes associated with the hormonesignaling pathway, anther develop-ment in Arabidopsis"(PubMedID : 28944535)@transcription factor, putative, expressed K14431: transcription factor TGA
19 Sobic.003G368000 OsFBT3 - F-box and tubby domain containing protein, expressed -
20 Sobic.005G195600 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase


Gene co-expression network
sample Sobic002G372300 Sobic002G372300 Sobic001G294400 Sobic001G294400 Sobic002G372300--Sobic001G294400 Sobic001G090000 Sobic001G090000 Sobic002G372300--Sobic001G090000 Sobic006G220500 Sobic006G220500 Sobic002G372300--Sobic006G220500 Sobic003G227700 Sobic003G227700 Sobic002G372300--Sobic003G227700 Sobic006G018300 Sobic006G018300 Sobic002G372300--Sobic006G018300 Sobic003G127100 Sobic003G127100 Sobic002G372300--Sobic003G127100 Sobic008G037900 Sobic008G037900 Sobic002G372300--Sobic008G037900 Sobic005G211400 Sobic005G211400 Sobic002G372300--Sobic005G211400 Sobic003G019700 Sobic003G019700 Sobic002G372300--Sobic003G019700 Sobic006G242100 Sobic006G242100 Sobic001G294400--Sobic006G242100 Sobic004G212300 Sobic004G212300 Sobic001G294400--Sobic004G212300 Sobic010G069900 Sobic010G069900 Sobic001G294400--Sobic010G069900 Sobic001G084100 Sobic001G084100 Sobic001G294400--Sobic001G084100 Sobic010G071400 Sobic010G071400 Sobic001G294400--Sobic010G071400 Sobic010G052200 Sobic010G052200 Sobic001G294400--Sobic010G052200 Sobic004G172100 Sobic004G172100 Sobic001G294400--Sobic004G172100 Sobic005G142300 Sobic005G142300 Sobic001G294400--Sobic005G142300 Sobic009G102600 Sobic009G102600 Sobic001G294400--Sobic009G102600 Sobic010G144400 Sobic010G144400 Sobic001G090000--Sobic010G144400 Sobic009G016201 Sobic009G016201 Sobic001G090000--Sobic009G016201 Sobic008G132800 Sobic008G132800 Sobic001G090000--Sobic008G132800 Sobic002G068300 Sobic002G068300 Sobic001G090000--Sobic002G068300 Sobic004G172700 Sobic004G172700 Sobic001G090000--Sobic004G172700 Sobic010G029400 Sobic010G029400 Sobic001G090000--Sobic010G029400 Sobic006G150600 Sobic006G150600 Sobic001G090000--Sobic006G150600 Sobic001G282100 Sobic001G282100 Sobic001G090000--Sobic001G282100 Sobic010G008100 Sobic010G008100 Sobic001G090000--Sobic010G008100 Sobic007G065500 Sobic007G065500 Sobic006G220500--Sobic007G065500 Sobic007G120800 Sobic007G120800 Sobic006G220500--Sobic007G120800 Sobic002G186900 Sobic002G186900 Sobic006G220500--Sobic002G186900 Sobic007G119800 Sobic007G119800 Sobic006G220500--Sobic007G119800 Sobic003G273700 Sobic003G273700 Sobic006G220500--Sobic003G273700 Sobic009G043500 Sobic009G043500 Sobic006G220500--Sobic009G043500 Sobic003G432100 Sobic003G432100 Sobic006G220500--Sobic003G432100 Sobic001G000400 Sobic001G000400 Sobic006G220500--Sobic001G000400 Sobic010G192432 Sobic010G192432 Sobic006G220500--Sobic010G192432 Sobic003G227700--Sobic010G069900 Sobic003G257400 Sobic003G257400 Sobic003G227700--Sobic003G257400 Sobic003G227700--Sobic010G071400 Sobic006G003100 Sobic006G003100 Sobic003G227700--Sobic006G003100 Sobic001G006201 Sobic001G006201 Sobic003G227700--Sobic001G006201 Sobic007G158800 Sobic007G158800 Sobic003G227700--Sobic007G158800 Sobic003G000100 Sobic003G000100 Sobic003G227700--Sobic003G000100 Sobic010G152400 Sobic010G152400 Sobic003G227700--Sobic010G152400 Sobic004G106100 Sobic004G106100 Sobic003G227700--Sobic004G106100 Sobic002G153100 Sobic002G153100 Sobic006G018300--Sobic002G153100 Sobic003G045600 Sobic003G045600 Sobic006G018300--Sobic003G045600 Sobic001G289400 Sobic001G289400 Sobic006G018300--Sobic001G289400 Sobic006G160000 Sobic006G160000 Sobic006G018300--Sobic006G160000 Sobic004G296700 Sobic004G296700 Sobic006G018300--Sobic004G296700 Sobic007G034600 Sobic007G034600 Sobic006G018300--Sobic007G034600 Sobic006G018300--Sobic002G372300 Sobic005G036300 Sobic005G036300 Sobic006G018300--Sobic005G036300 Sobic006G018300--Sobic007G065500 Sobic010G008600 Sobic010G008600 Sobic003G127100--Sobic010G008600 Sobic002G372800 Sobic002G372800 Sobic003G127100--Sobic002G372800 Sobic008G168100 Sobic008G168100 Sobic003G127100--Sobic008G168100 Sobic010G101400 Sobic010G101400 Sobic003G127100--Sobic010G101400 Sobic003G127100--Sobic006G242100 Sobic001G063500 Sobic001G063500 Sobic003G127100--Sobic001G063500 Sobic006G081600 Sobic006G081600 Sobic003G127100--Sobic006G081600 Sobic004G033000 Sobic004G033000 Sobic003G127100--Sobic004G033000 Sobic003G127100--Sobic001G294400 Sobic010G097200 Sobic010G097200 Sobic008G037900--Sobic010G097200 Sobic007G220400 Sobic007G220400 Sobic008G037900--Sobic007G220400 Sobic006G205700 Sobic006G205700 Sobic008G037900--Sobic006G205700 Sobic002G111900 Sobic002G111900 Sobic008G037900--Sobic002G111900 Sobic010G241900 Sobic010G241900 Sobic008G037900--Sobic010G241900 Sobic009G065700 Sobic009G065700 Sobic008G037900--Sobic009G065700 Sobic003G441800 Sobic003G441800 Sobic008G037900--Sobic003G441800 Sobic003G167300 Sobic003G167300 Sobic008G037900--Sobic003G167300 Sobic002G391400 Sobic002G391400 Sobic008G037900--Sobic002G391400 Sobic009G241700 Sobic009G241700 Sobic005G211400--Sobic009G241700 Sobic007G098400 Sobic007G098400 Sobic005G211400--Sobic007G098400 Sobic002G242500 Sobic002G242500 Sobic005G211400--Sobic002G242500 Sobic003G294400 Sobic003G294400 Sobic005G211400--Sobic003G294400 Sobic004G232400 Sobic004G232400 Sobic005G211400--Sobic004G232400 Sobic004G145200 Sobic004G145200 Sobic005G211400--Sobic004G145200 Sobic006G076201 Sobic006G076201 Sobic005G211400--Sobic006G076201 Sobic005G211400--Sobic001G090000 Sobic001G403700 Sobic001G403700 Sobic005G211400--Sobic001G403700 Sobic003G019800 Sobic003G019800 Sobic003G019700--Sobic003G019800 Sobic003G016600 Sobic003G016600 Sobic003G019700--Sobic003G016600 Sobic005G092000 Sobic005G092000 Sobic003G019700--Sobic005G092000 Sobic005G110490 Sobic005G110490 Sobic003G019700--Sobic005G110490 Sobic009G257700 Sobic009G257700 Sobic003G019700--Sobic009G257700 Sobic010G035900 Sobic010G035900 Sobic003G019700--Sobic010G035900 Sobic003G019700--Sobic006G076201 Sobic003G019700--Sobic002G372800 Sobic003G019700--Sobic010G069900
Octagon: transcription factors


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