Gene annotation
Transcriptome id Sobic.005G036300.4,Sobic.005G036300.3,Sobic.005G036300.2
Synonym
Functional annotation expressed protein
UniProt A0A1B6PPY8
Pfam PF05910
Panther DB PTHR31972 PTHR31972:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G27770 : Plant protein of unknown function (DUF868)
RAP-DB (Rice) LOC_Os12g05360.1 : ligA, putative, expressed
MaizeGDB (Corn) Zm00025a033477 , Zm00025a013021
Brachypodium KQJ92279
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G036300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G442200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5
2 Sobic.005G003750 - -
3 Sobic.005G226000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@S-domain receptor-like protein kinase, putative, expressed -
4 Sobic.010G168500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
5 Sobic.010G230300 galactosyltransferase, putative, expressed -
6 Sobic.003G086500 expressed protein -
7 Sobic.007G194100 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
8 Sobic.009G025100 transporter, putative, expressed -
9 Sobic.003G036700 cytokinin dehydrogenase precursor, putative, expressed K00279: cytokinin dehydrogenase
10 Sobic.002G247300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcription factor, putative, expressed K14431: transcription factor TGA
11 Sobic.004G340500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsFBX65 - F-box domain containing protein, expressed -
12 Sobic.007G150700 Leucine Rich Repeat family protein, expressed K15082: DNA repair protein RAD7
13 Sobic.007G083000 transcriptional repressor, putative, expressed -
14 Sobic.006G232500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nuclease PA3, putative, expressed -
15 Sobic.001G368900 IQ calmodulin-binding motif family protein, putative, expressed -
16 Sobic.004G196800 tetratricopeptide repeat containing protein, putative, expressed -
17 Sobic.004G067900 expressed protein -
18 Sobic.003G430100 Phosphoesterase family protein(PubMedID : 24906815)@phosphoesterase family protein, putative, expressed K01114: phospholipase C
19 Sobic.001G458400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Os3bglu6 - beta-glucosidase/beta-fucosidase/beta-galactosidase, expressed K01188: beta-glucosidase
20 Sobic.002G240700 OsSub58 - Putative Subtilisin homologue, expressed -


Gene co-expression network
sample Sobic005G036300 Sobic005G036300 Sobic001G442200 Sobic001G442200 Sobic005G036300--Sobic001G442200 Sobic005G003750 Sobic005G003750 Sobic005G036300--Sobic005G003750 Sobic005G226000 Sobic005G226000 Sobic005G036300--Sobic005G226000 Sobic010G168500 Sobic010G168500 Sobic005G036300--Sobic010G168500 Sobic010G230300 Sobic010G230300 Sobic005G036300--Sobic010G230300 Sobic003G086500 Sobic003G086500 Sobic005G036300--Sobic003G086500 Sobic007G194100 Sobic007G194100 Sobic005G036300--Sobic007G194100 Sobic009G025100 Sobic009G025100 Sobic005G036300--Sobic009G025100 Sobic003G036700 Sobic003G036700 Sobic005G036300--Sobic003G036700 Sobic007G150700 Sobic007G150700 Sobic001G442200--Sobic007G150700 Sobic004G196800 Sobic004G196800 Sobic001G442200--Sobic004G196800 Sobic005G098700 Sobic005G098700 Sobic001G442200--Sobic005G098700 Sobic001G442200--Sobic010G168500 Sobic007G172100 Sobic007G172100 Sobic001G442200--Sobic007G172100 Sobic010G037200 Sobic010G037200 Sobic001G442200--Sobic010G037200 Sobic002G293100 Sobic002G293100 Sobic001G442200--Sobic002G293100 Sobic005G171800 Sobic005G171800 Sobic001G442200--Sobic005G171800 Sobic001G442200--Sobic007G194100 Sobic005G003750--Sobic010G168500 Sobic008G039700 Sobic008G039700 Sobic005G003750--Sobic008G039700 Sobic009G071600 Sobic009G071600 Sobic005G003750--Sobic009G071600 Sobic010G227400 Sobic010G227400 Sobic005G003750--Sobic010G227400 Sobic005G003750--Sobic009G025100 Sobic005G153200 Sobic005G153200 Sobic005G003750--Sobic005G153200 Sobic001G259250 Sobic001G259250 Sobic005G003750--Sobic001G259250 Sobic004G142000 Sobic004G142000 Sobic005G003750--Sobic004G142000 Sobic005G193700 Sobic005G193700 Sobic005G003750--Sobic005G193700 Sobic002G247300 Sobic002G247300 Sobic005G226000--Sobic002G247300 Sobic005G226000--Sobic005G003750 Sobic001G368900 Sobic001G368900 Sobic005G226000--Sobic001G368900 Sobic001G484100 Sobic001G484100 Sobic005G226000--Sobic001G484100 Sobic005G226000--Sobic009G025100 Sobic002G008200 Sobic002G008200 Sobic005G226000--Sobic002G008200 Sobic003G430100 Sobic003G430100 Sobic005G226000--Sobic003G430100 Sobic001G518700 Sobic001G518700 Sobic005G226000--Sobic001G518700 Sobic007G091200 Sobic007G091200 Sobic005G226000--Sobic007G091200 Sobic010G168500--Sobic008G039700 Sobic010G168500--Sobic009G071600 Sobic007G034900 Sobic007G034900 Sobic010G168500--Sobic007G034900 Sobic010G168500--Sobic001G259250 Sobic010G168500--Sobic005G153200 Sobic010G200200 Sobic010G200200 Sobic010G168500--Sobic010G200200 Sobic010G168500--Sobic004G142000 Sobic001G037800 Sobic001G037800 Sobic010G168500--Sobic001G037800 Sobic002G338600 Sobic002G338600 Sobic010G168500--Sobic002G338600 Sobic007G083000 Sobic007G083000 Sobic010G230300--Sobic007G083000 Sobic008G122500 Sobic008G122500 Sobic010G230300--Sobic008G122500 Sobic010G230300--Sobic003G430100 Sobic004G210000 Sobic004G210000 Sobic010G230300--Sobic004G210000 Sobic010G230300--Sobic005G226000 Sobic002G155700 Sobic002G155700 Sobic010G230300--Sobic002G155700 Sobic001G458400 Sobic001G458400 Sobic010G230300--Sobic001G458400 Sobic007G208200 Sobic007G208200 Sobic010G230300--Sobic007G208200 Sobic003G149600 Sobic003G149600 Sobic010G230300--Sobic003G149600 Sobic004G232600 Sobic004G232600 Sobic003G086500--Sobic004G232600 Sobic003G086500--Sobic005G036300 Sobic006G160000 Sobic006G160000 Sobic003G086500--Sobic006G160000 Sobic006G187200 Sobic006G187200 Sobic003G086500--Sobic006G187200 Sobic001G203700 Sobic001G203700 Sobic003G086500--Sobic001G203700 Sobic002G096900 Sobic002G096900 Sobic003G086500--Sobic002G096900 Sobic003G229800 Sobic003G229800 Sobic003G086500--Sobic003G229800 Sobic003G086500--Sobic005G226000 Sobic001G467500 Sobic001G467500 Sobic003G086500--Sobic001G467500 Sobic002G240700 Sobic002G240700 Sobic007G194100--Sobic002G240700 Sobic007G194100--Sobic010G037200 Sobic009G199300 Sobic009G199300 Sobic007G194100--Sobic009G199300 Sobic002G308400 Sobic002G308400 Sobic007G194100--Sobic002G308400 Sobic007G194100--Sobic005G098700 Sobic007G194100--Sobic009G025100 Sobic004G067900 Sobic004G067900 Sobic007G194100--Sobic004G067900 Sobic007G194100--Sobic007G208200 Sobic007G194100--Sobic001G442200 Sobic001G170500 Sobic001G170500 Sobic009G025100--Sobic001G170500 Sobic009G025100--Sobic008G039700 Sobic009G025100--Sobic010G037200 Sobic009G025100--Sobic010G168500 Sobic008G081700 Sobic008G081700 Sobic009G025100--Sobic008G081700 Sobic009G025100--Sobic009G071600 Sobic009G025100--Sobic010G227400 Sobic008G088450 Sobic008G088450 Sobic009G025100--Sobic008G088450 Sobic009G025100--Sobic002G338600 Sobic010G133700 Sobic010G133700 Sobic003G036700--Sobic010G133700 Sobic001G196700 Sobic001G196700 Sobic003G036700--Sobic001G196700 Sobic006G132400 Sobic006G132400 Sobic003G036700--Sobic006G132400 Sobic003G095600 Sobic003G095600 Sobic003G036700--Sobic003G095600 Sobic003G036700--Sobic010G168500 Sobic001G417600 Sobic001G417600 Sobic003G036700--Sobic001G417600 Sobic001G082500 Sobic001G082500 Sobic003G036700--Sobic001G082500 Sobic003G376000 Sobic003G376000 Sobic003G036700--Sobic003G376000 Sobic006G147400 Sobic006G147400 Sobic003G036700--Sobic006G147400
Octagon: transcription factors


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