Gene annotation
Transcriptome id Sobic.004G085700.1
Synonym Sb04g007080
Functional annotation expressed protein
UniProt C5XXX3
Pfam PF15697
Panther DB PTHR33730
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G80180 : -
RAP-DB (Rice) LOC_Os06g39912.1 : expressed protein
MaizeGDB (Corn) Zm00025a019513
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G027300 DNA binding protein, putative, expressed -
2 Sobic.001G161000 AGG2, putative, expressed -
3 Sobic.006G096600 DUF623 domain containing protein, expressed -
4 Sobic.005G170100 phosphoesterase family protein, putative, expressed K01114: phospholipase C
5 Sobic.002G393600 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.005G123500 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
7 Sobic.004G024100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AT hook motif domain containing protein, expressed -
8 Sobic.005G120500 expressed protein -
9 Sobic.009G170800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
10 Sobic.001G191800 harpin-induced protein 1 domain containing protein, expressed -
11 Sobic.004G105100 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.002G290500 armadillo/beta-catenin repeat protein-related, putative, expressed -
13 Sobic.003G041500 WD domain, G-beta repeat domain containing protein, expressed K14553: U3 small nucleolar RNA-associated protein 18
14 Sobic.008G102800 expressed protein -
15 Sobic.010G265900 novel plant SNARE 11, putative, expressed K08494: novel plant SNARE
16 Sobic.003G094800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinacetylesterase domain containing protein, expressed -
17 Sobic.003G229800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@X8 domain containing protein, expressed -
18 Sobic.002G040600 zinc finger, C3HC4 type domain containing protein, expressed K19043: E3 ubiquitin-protein ligase RHF
19 Sobic.001G013800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, expressed -
20 Sobic.008G147900 phosphoribosyl transferase, putative, expressed K00759: APRT, adenine phosphoribosyltransferase


Gene co-expression network
sample Sobic004G085700 Sobic004G085700 Sobic010G027300 Sobic010G027300 Sobic004G085700--Sobic010G027300 Sobic001G161000 Sobic001G161000 Sobic004G085700--Sobic001G161000 Sobic006G096600 Sobic006G096600 Sobic004G085700--Sobic006G096600 Sobic005G170100 Sobic005G170100 Sobic004G085700--Sobic005G170100 Sobic002G393600 Sobic002G393600 Sobic004G085700--Sobic002G393600 Sobic005G123500 Sobic005G123500 Sobic004G085700--Sobic005G123500 Sobic004G024100 Sobic004G024100 Sobic004G085700--Sobic004G024100 Sobic005G120500 Sobic005G120500 Sobic004G085700--Sobic005G120500 Sobic009G170800 Sobic009G170800 Sobic004G085700--Sobic009G170800 Sobic003G205600 Sobic003G205600 Sobic010G027300--Sobic003G205600 Sobic001G264000 Sobic001G264000 Sobic010G027300--Sobic001G264000 Sobic004G348800 Sobic004G348800 Sobic010G027300--Sobic004G348800 Sobic003G093700 Sobic003G093700 Sobic010G027300--Sobic003G093700 Sobic003G269600 Sobic003G269600 Sobic010G027300--Sobic003G269600 Sobic010G212500 Sobic010G212500 Sobic010G027300--Sobic010G212500 Sobic002G404100 Sobic002G404100 Sobic010G027300--Sobic002G404100 Sobic001G430100 Sobic001G430100 Sobic010G027300--Sobic001G430100 Sobic004G249000 Sobic004G249000 Sobic010G027300--Sobic004G249000 Sobic001G161000--Sobic004G024100 Sobic006G197100 Sobic006G197100 Sobic001G161000--Sobic006G197100 Sobic001G147900 Sobic001G147900 Sobic001G161000--Sobic001G147900 Sobic002G185800 Sobic002G185800 Sobic001G161000--Sobic002G185800 Sobic007G165400 Sobic007G165400 Sobic001G161000--Sobic007G165400 Sobic003G079400 Sobic003G079400 Sobic001G161000--Sobic003G079400 Sobic003G368600 Sobic003G368600 Sobic001G161000--Sobic003G368600 Sobic001G082600 Sobic001G082600 Sobic001G161000--Sobic001G082600 Sobic007G176000 Sobic007G176000 Sobic001G161000--Sobic007G176000 Sobic006G097000 Sobic006G097000 Sobic006G096600--Sobic006G097000 Sobic004G348400 Sobic004G348400 Sobic006G096600--Sobic004G348400 Sobic003G011600 Sobic003G011600 Sobic006G096600--Sobic003G011600 Sobic002G247600 Sobic002G247600 Sobic006G096600--Sobic002G247600 Sobic001G331200 Sobic001G331200 Sobic006G096600--Sobic001G331200 Sobic004G202400 Sobic004G202400 Sobic006G096600--Sobic004G202400 Sobic006G096600--Sobic004G085700 Sobic001G462700 Sobic001G462700 Sobic006G096600--Sobic001G462700 Sobic002G379200 Sobic002G379200 Sobic006G096600--Sobic002G379200 Sobic006G225500 Sobic006G225500 Sobic005G170100--Sobic006G225500 Sobic001G300500 Sobic001G300500 Sobic005G170100--Sobic001G300500 Sobic002G183700 Sobic002G183700 Sobic005G170100--Sobic002G183700 Sobic005G127400 Sobic005G127400 Sobic005G170100--Sobic005G127400 Sobic005G170100--Sobic010G027300 Sobic004G110700 Sobic004G110700 Sobic005G170100--Sobic004G110700 Sobic003G140700 Sobic003G140700 Sobic005G170100--Sobic003G140700 Sobic001G502000 Sobic001G502000 Sobic005G170100--Sobic001G502000 Sobic007G158800 Sobic007G158800 Sobic005G170100--Sobic007G158800 Sobic007G074200 Sobic007G074200 Sobic002G393600--Sobic007G074200 Sobic002G338250 Sobic002G338250 Sobic002G393600--Sobic002G338250 Sobic004G117600 Sobic004G117600 Sobic002G393600--Sobic004G117600 Sobic008G111500 Sobic008G111500 Sobic002G393600--Sobic008G111500 Sobic001G488000 Sobic001G488000 Sobic002G393600--Sobic001G488000 Sobic009G131400 Sobic009G131400 Sobic002G393600--Sobic009G131400 Sobic003G146400 Sobic003G146400 Sobic002G393600--Sobic003G146400 Sobic006G198800 Sobic006G198800 Sobic002G393600--Sobic006G198800 Sobic006G136800 Sobic006G136800 Sobic002G393600--Sobic006G136800 Sobic005G123500--Sobic002G393600 Sobic005G123500--Sobic004G085700 Sobic002G387900 Sobic002G387900 Sobic005G123500--Sobic002G387900 Sobic009G216800 Sobic009G216800 Sobic005G123500--Sobic009G216800 Sobic005G123500--Sobic009G170800 Sobic005G123500--Sobic010G027300 Sobic008G147900 Sobic008G147900 Sobic005G123500--Sobic008G147900 Sobic002G040600 Sobic002G040600 Sobic005G123500--Sobic002G040600 Sobic002G251900 Sobic002G251900 Sobic005G123500--Sobic002G251900 Sobic003G404600 Sobic003G404600 Sobic004G024100--Sobic003G404600 Sobic006G256900 Sobic006G256900 Sobic004G024100--Sobic006G256900 Sobic004G024100--Sobic001G147900 Sobic004G024100--Sobic006G197100 Sobic003G152200 Sobic003G152200 Sobic004G024100--Sobic003G152200 Sobic006G059700 Sobic006G059700 Sobic004G024100--Sobic006G059700 Sobic004G024100--Sobic001G161000 Sobic004G042000 Sobic004G042000 Sobic004G024100--Sobic004G042000 Sobic010G110800 Sobic010G110800 Sobic004G024100--Sobic010G110800 Sobic005G080900 Sobic005G080900 Sobic005G120500--Sobic005G080900 Sobic010G265900 Sobic010G265900 Sobic005G120500--Sobic010G265900 Sobic005G120500--Sobic009G216800 Sobic008G102800 Sobic008G102800 Sobic005G120500--Sobic008G102800 Sobic007G150800 Sobic007G150800 Sobic005G120500--Sobic007G150800 Sobic009G173500 Sobic009G173500 Sobic005G120500--Sobic009G173500 Sobic003G122200 Sobic003G122200 Sobic005G120500--Sobic003G122200 Sobic001G347901 Sobic001G347901 Sobic005G120500--Sobic001G347901 Sobic001G157800 Sobic001G157800 Sobic005G120500--Sobic001G157800 Sobic004G067900 Sobic004G067900 Sobic009G170800--Sobic004G067900 Sobic009G170800--Sobic009G216800 Sobic002G308400 Sobic002G308400 Sobic009G170800--Sobic002G308400 Sobic010G196800 Sobic010G196800 Sobic009G170800--Sobic010G196800 Sobic002G419500 Sobic002G419500 Sobic009G170800--Sobic002G419500 Sobic004G318400 Sobic004G318400 Sobic009G170800--Sobic004G318400 Sobic006G066600 Sobic006G066600 Sobic009G170800--Sobic006G066600 Sobic001G106400 Sobic001G106400 Sobic009G170800--Sobic001G106400 Sobic004G102900 Sobic004G102900 Sobic009G170800--Sobic004G102900
Octagon: transcription factors


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