Gene annotation
Transcriptome id Sobic.001G191800.1
Synonym Sb01g016860
Functional annotation harpin-induced protein 1 domain containing protein, expressed
UniProt C5WVB5
Pfam PF03168
Panther DB PTHR31852 PTHR31852:SF31
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G05975 : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
RAP-DB (Rice) LOC_Os06g32970.1 : harpin-induced protein 1 domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G161000 AGG2, putative, expressed -
2 Sobic.002G290500 armadillo/beta-catenin repeat protein-related, putative, expressed -
3 Sobic.004G085700 expressed protein -
4 Sobic.001G013800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, expressed -
5 Sobic.002G419500 HAD superfamily phosphatase, putative, expressed -
6 Sobic.001G106400 serine esterase family protein, putative, expressed K10606: FANCL, E3 ubiquitin-protein ligase FANCL
7 Sobic.006G170400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.009G170800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
9 Sobic.001G101200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@PIII5 - Proteinase inhibitor II family protein precursor, expressed -
10 Sobic.008G082200 osFTL7 FT-Like7 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
11 Sobic.010G023000 expressed protein -
12 Sobic.003G249900 metallo-beta-lactamase family protein, putative, expressed K17725: sulfur dioxygenase
13 Sobic.004G102900 FUWA(Ortholog in rice:Chen 2015)(PubMedID : 31659879)@"encodes an NHL domain-containing protein regulating panicle architecture, grain shape and grain weight"(PubMedID : 26043067)@NHL repeat-containing protein, putative, expressed -
14 Sobic.006G096600 DUF623 domain containing protein, expressed -
15 Sobic.002G260800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
16 Sobic.006G096300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
17 Sobic.004G166500 N-carbamoylputrescine amidohydrolase(PubMedID : 27325899)@Up-regulated by silicon application under drought stress(PubMedID : 24813726)@N-carbamoylputrescine amidase, putative, expressed K12251: N-carbamoylputrescine amidase
18 Sobic.001G488200 aminotransferase, putative, expressed K00827: alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase
19 Sobic.001G389900 aquaporin SIP2-1, putative, expressed K09875: aquaporin SIP
20 Sobic.004G024100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AT hook motif domain containing protein, expressed -


Gene co-expression network
sample Sobic001G191800 Sobic001G191800 Sobic001G161000 Sobic001G161000 Sobic001G191800--Sobic001G161000 Sobic002G290500 Sobic002G290500 Sobic001G191800--Sobic002G290500 Sobic004G085700 Sobic004G085700 Sobic001G191800--Sobic004G085700 Sobic001G013800 Sobic001G013800 Sobic001G191800--Sobic001G013800 Sobic002G419500 Sobic002G419500 Sobic001G191800--Sobic002G419500 Sobic001G106400 Sobic001G106400 Sobic001G191800--Sobic001G106400 Sobic006G170400 Sobic006G170400 Sobic001G191800--Sobic006G170400 Sobic009G170800 Sobic009G170800 Sobic001G191800--Sobic009G170800 Sobic001G101200 Sobic001G101200 Sobic001G191800--Sobic001G101200 Sobic004G024100 Sobic004G024100 Sobic001G161000--Sobic004G024100 Sobic006G197100 Sobic006G197100 Sobic001G161000--Sobic006G197100 Sobic001G147900 Sobic001G147900 Sobic001G161000--Sobic001G147900 Sobic002G185800 Sobic002G185800 Sobic001G161000--Sobic002G185800 Sobic007G165400 Sobic007G165400 Sobic001G161000--Sobic007G165400 Sobic003G079400 Sobic003G079400 Sobic001G161000--Sobic003G079400 Sobic003G368600 Sobic003G368600 Sobic001G161000--Sobic003G368600 Sobic001G082600 Sobic001G082600 Sobic001G161000--Sobic001G082600 Sobic007G176000 Sobic007G176000 Sobic001G161000--Sobic007G176000 Sobic004G117600 Sobic004G117600 Sobic002G290500--Sobic004G117600 Sobic002G290500--Sobic002G419500 Sobic008G111500 Sobic008G111500 Sobic002G290500--Sobic008G111500 Sobic008G082200 Sobic008G082200 Sobic002G290500--Sobic008G082200 Sobic002G338250 Sobic002G338250 Sobic002G290500--Sobic002G338250 Sobic001G365100 Sobic001G365100 Sobic002G290500--Sobic001G365100 Sobic010G259500 Sobic010G259500 Sobic002G290500--Sobic010G259500 Sobic003G191500 Sobic003G191500 Sobic002G290500--Sobic003G191500 Sobic001G447100 Sobic001G447100 Sobic002G290500--Sobic001G447100 Sobic010G027300 Sobic010G027300 Sobic004G085700--Sobic010G027300 Sobic004G085700--Sobic001G161000 Sobic006G096600 Sobic006G096600 Sobic004G085700--Sobic006G096600 Sobic005G170100 Sobic005G170100 Sobic004G085700--Sobic005G170100 Sobic002G393600 Sobic002G393600 Sobic004G085700--Sobic002G393600 Sobic005G123500 Sobic005G123500 Sobic004G085700--Sobic005G123500 Sobic004G085700--Sobic004G024100 Sobic005G120500 Sobic005G120500 Sobic004G085700--Sobic005G120500 Sobic004G085700--Sobic009G170800 Sobic009G216800 Sobic009G216800 Sobic001G013800--Sobic009G216800 Sobic002G040600 Sobic002G040600 Sobic001G013800--Sobic002G040600 Sobic004G063500 Sobic004G063500 Sobic001G013800--Sobic004G063500 Sobic006G260300 Sobic006G260300 Sobic001G013800--Sobic006G260300 Sobic003G358300 Sobic003G358300 Sobic001G013800--Sobic003G358300 Sobic006G159600 Sobic006G159600 Sobic001G013800--Sobic006G159600 Sobic001G201100 Sobic001G201100 Sobic001G013800--Sobic001G201100 Sobic001G013800--Sobic001G191800 Sobic001G013800--Sobic001G106400 Sobic002G419500--Sobic002G290500 Sobic004G225800 Sobic004G225800 Sobic002G419500--Sobic004G225800 Sobic007G074200 Sobic007G074200 Sobic002G419500--Sobic007G074200 Sobic002G419500--Sobic009G170800 Sobic004G102900 Sobic004G102900 Sobic002G419500--Sobic004G102900 Sobic006G066600 Sobic006G066600 Sobic002G419500--Sobic006G066600 Sobic004G067900 Sobic004G067900 Sobic002G419500--Sobic004G067900 Sobic004G056201 Sobic004G056201 Sobic002G419500--Sobic004G056201 Sobic002G308400 Sobic002G308400 Sobic002G419500--Sobic002G308400 Sobic001G106400--Sobic004G067900 Sobic001G106400--Sobic002G308400 Sobic006G096300 Sobic006G096300 Sobic001G106400--Sobic006G096300 Sobic001G106400--Sobic006G066600 Sobic001G106400--Sobic002G393600 Sobic010G168200 Sobic010G168200 Sobic001G106400--Sobic010G168200 Sobic009G232800 Sobic009G232800 Sobic001G106400--Sobic009G232800 Sobic001G106400--Sobic004G102900 Sobic009G070200 Sobic009G070200 Sobic001G106400--Sobic009G070200 Sobic006G170400--Sobic006G066600 Sobic006G170400--Sobic002G419500 Sobic002G260800 Sobic002G260800 Sobic006G170400--Sobic002G260800 Sobic006G170400--Sobic001G191800 Sobic006G170400--Sobic004G067900 Sobic006G170400--Sobic001G106400 Sobic006G170400--Sobic002G308400 Sobic006G170400--Sobic006G096300 Sobic006G170400--Sobic002G290500 Sobic009G170800--Sobic004G067900 Sobic009G170800--Sobic009G216800 Sobic009G170800--Sobic002G308400 Sobic010G196800 Sobic010G196800 Sobic009G170800--Sobic010G196800 Sobic009G170800--Sobic002G419500 Sobic004G318400 Sobic004G318400 Sobic009G170800--Sobic004G318400 Sobic009G170800--Sobic006G066600 Sobic009G170800--Sobic001G106400 Sobic009G170800--Sobic004G102900 Sobic004G333150 Sobic004G333150 Sobic001G101200--Sobic004G333150 Sobic001G243600 Sobic001G243600 Sobic001G101200--Sobic001G243600 Sobic003G271500 Sobic003G271500 Sobic001G101200--Sobic003G271500 Sobic004G273400 Sobic004G273400 Sobic001G101200--Sobic004G273400 Sobic001G100700 Sobic001G100700 Sobic001G101200--Sobic001G100700 Sobic001G101200--Sobic008G082200 Sobic001G478200 Sobic001G478200 Sobic001G101200--Sobic001G478200 Sobic010G052700 Sobic010G052700 Sobic001G101200--Sobic010G052700 Sobic002G310500 Sobic002G310500 Sobic001G101200--Sobic002G310500
Octagon: transcription factors


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