Gene annotation
Transcriptome id Sobic.010G023000.1
Synonym Sb10g002160
Functional annotation expressed protein
UniProt C5Z3C4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g04210.1 : expressed protein
MaizeGDB (Corn) Zm00025a050150
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G082200 osFTL7 FT-Like7 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
2 Sobic.001G100700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@PIII5 - Proteinase inhibitor II family protein precursor, expressed -
3 Sobic.001G243600 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
4 Sobic.001G243500 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
5 Sobic.009G158700 - -
6 Sobic.009G106800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
7 Sobic.005G213200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein kinase family protein, putative, expressed -
8 Sobic.001G348700 - -
9 Sobic.006G277550 - K00430: peroxidase
10 Sobic.007G148000 heat shock protein DnaJ, putative, expressed -
11 Sobic.001G403000 expressed protein -
12 Sobic.001G331301 - -
13 Sobic.004G273400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptide transporter, putative, expressed -
14 Sobic.005G203100 tropinone reductase 2, putative, expressed K08081: tropinone reductase I
15 Sobic.009G120000 - -
16 Sobic.001G487300 expressed protein -
17 Sobic.005G203750 - -
18 Sobic.005G206601 - -
19 Sobic.002G375400 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
20 Sobic.001G341550 - -


Gene co-expression network
sample Sobic010G023000 Sobic010G023000 Sobic008G082200 Sobic008G082200 Sobic010G023000--Sobic008G082200 Sobic001G100700 Sobic001G100700 Sobic010G023000--Sobic001G100700 Sobic001G243600 Sobic001G243600 Sobic010G023000--Sobic001G243600 Sobic001G243500 Sobic001G243500 Sobic010G023000--Sobic001G243500 Sobic009G158700 Sobic009G158700 Sobic010G023000--Sobic009G158700 Sobic009G106800 Sobic009G106800 Sobic010G023000--Sobic009G106800 Sobic005G213200 Sobic005G213200 Sobic010G023000--Sobic005G213200 Sobic001G348700 Sobic001G348700 Sobic010G023000--Sobic001G348700 Sobic006G277550 Sobic006G277550 Sobic010G023000--Sobic006G277550 Sobic007G148000 Sobic007G148000 Sobic008G082200--Sobic007G148000 Sobic008G082200--Sobic010G023000 Sobic005G203100 Sobic005G203100 Sobic008G082200--Sobic005G203100 Sobic002G368500 Sobic002G368500 Sobic008G082200--Sobic002G368500 Sobic003G240600 Sobic003G240600 Sobic008G082200--Sobic003G240600 Sobic002G325100 Sobic002G325100 Sobic008G082200--Sobic002G325100 Sobic008G060050 Sobic008G060050 Sobic008G082200--Sobic008G060050 Sobic002G310500 Sobic002G310500 Sobic008G082200--Sobic002G310500 Sobic010G052700 Sobic010G052700 Sobic008G082200--Sobic010G052700 Sobic001G100700--Sobic005G213200 Sobic001G100700--Sobic001G243500 Sobic001G444400 Sobic001G444400 Sobic001G100700--Sobic001G444400 Sobic001G100700--Sobic001G243600 Sobic001G100700--Sobic009G106800 Sobic009G120000 Sobic009G120000 Sobic001G100700--Sobic009G120000 Sobic004G273400 Sobic004G273400 Sobic001G100700--Sobic004G273400 Sobic010G209900 Sobic010G209900 Sobic001G100700--Sobic010G209900 Sobic003G129000 Sobic003G129000 Sobic001G100700--Sobic003G129000 Sobic001G243600--Sobic004G273400 Sobic001G243600--Sobic005G213200 Sobic001G243600--Sobic001G243500 Sobic001G243600--Sobic001G100700 Sobic001G243600--Sobic009G120000 Sobic002G375400 Sobic002G375400 Sobic001G243600--Sobic002G375400 Sobic001G243600--Sobic009G106800 Sobic005G084600 Sobic005G084600 Sobic001G243600--Sobic005G084600 Sobic001G243600--Sobic001G444400 Sobic001G243500--Sobic004G273400 Sobic001G243500--Sobic001G243600 Sobic001G243500--Sobic001G100700 Sobic001G243500--Sobic005G213200 Sobic002G346100 Sobic002G346100 Sobic001G243500--Sobic002G346100 Sobic001G243500--Sobic009G106800 Sobic001G243400 Sobic001G243400 Sobic001G243500--Sobic001G243400 Sobic002G200300 Sobic002G200300 Sobic001G243500--Sobic002G200300 Sobic001G331301 Sobic001G331301 Sobic001G243500--Sobic001G331301 Sobic009G158700--Sobic001G243500 Sobic009G158700--Sobic009G106800 Sobic008G044500 Sobic008G044500 Sobic009G158700--Sobic008G044500 Sobic009G158700--Sobic005G213200 Sobic009G158700--Sobic001G243600 Sobic009G158700--Sobic001G100700 Sobic009G158700--Sobic004G273400 Sobic009G158700--Sobic006G277550 Sobic001G335600 Sobic001G335600 Sobic009G158700--Sobic001G335600 Sobic009G106800--Sobic001G444400 Sobic010G084400 Sobic010G084400 Sobic009G106800--Sobic010G084400 Sobic009G196400 Sobic009G196400 Sobic009G106800--Sobic009G196400 Sobic009G106800--Sobic001G100700 Sobic004G111800 Sobic004G111800 Sobic009G106800--Sobic004G111800 Sobic009G106800--Sobic005G213200 Sobic009G106800--Sobic001G243600 Sobic003G252800 Sobic003G252800 Sobic009G106800--Sobic003G252800 Sobic006G153100 Sobic006G153100 Sobic009G106800--Sobic006G153100 Sobic005G213200--Sobic001G100700 Sobic005G213200--Sobic001G243600 Sobic005G213200--Sobic001G243500 Sobic005G213200--Sobic009G120000 Sobic005G213200--Sobic009G106800 Sobic005G213200--Sobic001G444400 Sobic005G213200--Sobic004G273400 Sobic010G071900 Sobic010G071900 Sobic005G213200--Sobic010G071900 Sobic005G213200--Sobic010G209900 Sobic001G348700--Sobic003G252800 Sobic004G221500 Sobic004G221500 Sobic001G348700--Sobic004G221500 Sobic010G084700 Sobic010G084700 Sobic001G348700--Sobic010G084700 Sobic006G084600 Sobic006G084600 Sobic001G348700--Sobic006G084600 Sobic010G117900 Sobic010G117900 Sobic001G348700--Sobic010G117900 Sobic005G206601 Sobic005G206601 Sobic001G348700--Sobic005G206601 Sobic004G216600 Sobic004G216600 Sobic001G348700--Sobic004G216600 Sobic006G099900 Sobic006G099900 Sobic001G348700--Sobic006G099900 Sobic001G317200 Sobic001G317200 Sobic001G348700--Sobic001G317200 Sobic009G072900 Sobic009G072900 Sobic006G277550--Sobic009G072900 Sobic007G058300 Sobic007G058300 Sobic006G277550--Sobic007G058300 Sobic006G277550--Sobic008G044500 Sobic006G277550--Sobic005G213200 Sobic006G038800 Sobic006G038800 Sobic006G277550--Sobic006G038800 Sobic006G277550--Sobic001G331301 Sobic006G277550--Sobic001G243600 Sobic001G403000 Sobic001G403000 Sobic006G277550--Sobic001G403000 Sobic006G277550--Sobic002G375400
Octagon: transcription factors


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