Gene annotation
Transcriptome id Sobic.001G341550.1
Synonym -
Functional annotation -
UniProt A0A1Z5S8Z2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G200300 no apical meristem protein, putative, expressed -
2 Sobic.001G243600 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
3 Sobic.004G071650 - -
4 Sobic.008G060050 - -
5 Sobic.004G273400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptide transporter, putative, expressed -
6 Sobic.001G348700 - -
7 Sobic.009G057000 basic helix-loop-helix, putative, expressed -
8 Sobic.001G100700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@PIII5 - Proteinase inhibitor II family protein precursor, expressed -
9 Sobic.009G120000 - -
10 Sobic.001G243500 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
11 Sobic.005G213200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein kinase family protein, putative, expressed -
12 Sobic.003G240600 VQ domain containing protein, putative, expressed -
13 Sobic.002G375400 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
14 Sobic.005G203100 tropinone reductase 2, putative, expressed K08081: tropinone reductase I
15 Sobic.001G213000 expressed protein -
16 Sobic.007G141500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
17 Sobic.009G139700 - -
18 Sobic.006G153100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
19 Sobic.002G128300 MLA6 protein, putative, expressed K13457: RPM1, disease resistance protein RPM1
20 Sobic.004G166700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"Beta-fructofuranosidase, cell wall Invertase 2 (Os)"(PubMedID : 27208977)@glycosyl hydrolases, putative, expressed K01193: INV, beta-fructofuranosidase


Gene co-expression network
sample Sobic001G341550 Sobic001G341550 Sobic002G200300 Sobic002G200300 Sobic001G341550--Sobic002G200300 Sobic001G243600 Sobic001G243600 Sobic001G341550--Sobic001G243600 Sobic004G071650 Sobic004G071650 Sobic001G341550--Sobic004G071650 Sobic008G060050 Sobic008G060050 Sobic001G341550--Sobic008G060050 Sobic004G273400 Sobic004G273400 Sobic001G341550--Sobic004G273400 Sobic001G348700 Sobic001G348700 Sobic001G341550--Sobic001G348700 Sobic009G057000 Sobic009G057000 Sobic001G341550--Sobic009G057000 Sobic001G100700 Sobic001G100700 Sobic001G341550--Sobic001G100700 Sobic009G120000 Sobic009G120000 Sobic001G341550--Sobic009G120000 Sobic002G200300--Sobic001G341550 Sobic002G200300--Sobic001G243600 Sobic001G243500 Sobic001G243500 Sobic002G200300--Sobic001G243500 Sobic005G213200 Sobic005G213200 Sobic002G200300--Sobic005G213200 Sobic002G200300--Sobic009G057000 Sobic002G200300--Sobic001G100700 Sobic002G200300--Sobic004G273400 Sobic002G128300 Sobic002G128300 Sobic002G200300--Sobic002G128300 Sobic001G444400 Sobic001G444400 Sobic002G200300--Sobic001G444400 Sobic001G243600--Sobic004G273400 Sobic001G243600--Sobic005G213200 Sobic001G243600--Sobic001G243500 Sobic001G243600--Sobic001G100700 Sobic001G243600--Sobic009G120000 Sobic002G375400 Sobic002G375400 Sobic001G243600--Sobic002G375400 Sobic009G106800 Sobic009G106800 Sobic001G243600--Sobic009G106800 Sobic005G084600 Sobic005G084600 Sobic001G243600--Sobic005G084600 Sobic001G243600--Sobic001G444400 Sobic010G084100 Sobic010G084100 Sobic004G071650--Sobic010G084100 Sobic010G084700 Sobic010G084700 Sobic004G071650--Sobic010G084700 Sobic003G116800 Sobic003G116800 Sobic004G071650--Sobic003G116800 Sobic005G045900 Sobic005G045900 Sobic004G071650--Sobic005G045900 Sobic003G286600 Sobic003G286600 Sobic004G071650--Sobic003G286600 Sobic004G071650--Sobic001G348700 Sobic004G221500 Sobic004G221500 Sobic004G071650--Sobic004G221500 Sobic005G206601 Sobic005G206601 Sobic004G071650--Sobic005G206601 Sobic001G487300 Sobic001G487300 Sobic004G071650--Sobic001G487300 Sobic002G368500 Sobic002G368500 Sobic008G060050--Sobic002G368500 Sobic003G240600 Sobic003G240600 Sobic008G060050--Sobic003G240600 Sobic006G084600 Sobic006G084600 Sobic008G060050--Sobic006G084600 Sobic008G060050--Sobic001G348700 Sobic003G317100 Sobic003G317100 Sobic008G060050--Sobic003G317100 Sobic008G060050--Sobic004G071650 Sobic008G060050--Sobic001G487300 Sobic003G437200 Sobic003G437200 Sobic008G060050--Sobic003G437200 Sobic003G362100 Sobic003G362100 Sobic008G060050--Sobic003G362100 Sobic004G273400--Sobic001G243600 Sobic004G273400--Sobic001G243500 Sobic004G273400--Sobic001G100700 Sobic004G273400--Sobic005G213200 Sobic004G273400--Sobic009G106800 Sobic004G273400--Sobic001G444400 Sobic006G153100 Sobic006G153100 Sobic004G273400--Sobic006G153100 Sobic004G333150 Sobic004G333150 Sobic004G273400--Sobic004G333150 Sobic007G141500 Sobic007G141500 Sobic004G273400--Sobic007G141500 Sobic003G252800 Sobic003G252800 Sobic001G348700--Sobic003G252800 Sobic001G348700--Sobic004G221500 Sobic001G348700--Sobic010G084700 Sobic001G348700--Sobic006G084600 Sobic010G117900 Sobic010G117900 Sobic001G348700--Sobic010G117900 Sobic001G348700--Sobic005G206601 Sobic004G216600 Sobic004G216600 Sobic001G348700--Sobic004G216600 Sobic006G099900 Sobic006G099900 Sobic001G348700--Sobic006G099900 Sobic001G317200 Sobic001G317200 Sobic001G348700--Sobic001G317200 Sobic009G057000--Sobic002G200300 Sobic009G057000--Sobic001G341550 Sobic009G057000--Sobic002G128300 Sobic001G133532 Sobic001G133532 Sobic009G057000--Sobic001G133532 Sobic009G057000--Sobic001G243500 Sobic009G158700 Sobic009G158700 Sobic009G057000--Sobic009G158700 Sobic009G057000--Sobic001G243600 Sobic009G057000--Sobic004G273400 Sobic009G057000--Sobic001G100700 Sobic001G100700--Sobic005G213200 Sobic001G100700--Sobic001G243500 Sobic001G100700--Sobic001G444400 Sobic001G100700--Sobic001G243600 Sobic001G100700--Sobic009G106800 Sobic001G100700--Sobic009G120000 Sobic001G100700--Sobic004G273400 Sobic010G209900 Sobic010G209900 Sobic001G100700--Sobic010G209900 Sobic003G129000 Sobic003G129000 Sobic001G100700--Sobic003G129000 Sobic004G166700 Sobic004G166700 Sobic009G120000--Sobic004G166700 Sobic009G120000--Sobic007G141500 Sobic005G051200 Sobic005G051200 Sobic009G120000--Sobic005G051200 Sobic009G120000--Sobic001G317200 Sobic009G120000--Sobic005G084600 Sobic003G117600 Sobic003G117600 Sobic009G120000--Sobic003G117600 Sobic006G092500 Sobic006G092500 Sobic009G120000--Sobic006G092500 Sobic009G120000--Sobic001G243600 Sobic009G120000--Sobic005G213200
Octagon: transcription factors


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