Gene annotation
Transcriptome id Sobic.001G213000.1
Synonym Sb01g018830
Functional annotation expressed protein
UniProt A0A1Z5S6P2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G36960 : -
RAP-DB (Rice) LOC_Os10g34570.1 : expressed protein
MaizeGDB (Corn) Zm00025a017552 , Zm00025a006544
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G341550 - -
2 Sobic.002G200300 no apical meristem protein, putative, expressed -
3 Sobic.007G058300 AP2 domain containing protein, expressed -
4 Sobic.010G149700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.002G128300 MLA6 protein, putative, expressed K13457: RPM1, disease resistance protein RPM1
6 Sobic.004G105001 - -
7 Sobic.010G110266 - -
8 Sobic.004G071650 - -
9 Sobic.009G057000 basic helix-loop-helix, putative, expressed -
10 Sobic.001G331301 - -
11 Sobic.005G179200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK112d - OsWAK receptor-like protein kinase, expressed -
12 Sobic.005G213200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein kinase family protein, putative, expressed -
13 Sobic.003G227300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY11, expressed -
14 Sobic.001G006101 - -
15 Sobic.004G128400 O-methyltransferase, putative, expressed -
16 Sobic.010G238900 oryzain beta chain precursor, putative, expressed -
17 Sobic.001G320400 lysM domain containing protein, putative, expressed -
18 Sobic.006G277550 - K00430: peroxidase
19 Sobic.001G487300 expressed protein -
20 Sobic.005G206601 - -


Gene co-expression network
sample Sobic001G213000 Sobic001G213000 Sobic001G341550 Sobic001G341550 Sobic001G213000--Sobic001G341550 Sobic002G200300 Sobic002G200300 Sobic001G213000--Sobic002G200300 Sobic007G058300 Sobic007G058300 Sobic001G213000--Sobic007G058300 Sobic010G149700 Sobic010G149700 Sobic001G213000--Sobic010G149700 Sobic002G128300 Sobic002G128300 Sobic001G213000--Sobic002G128300 Sobic004G105001 Sobic004G105001 Sobic001G213000--Sobic004G105001 Sobic010G110266 Sobic010G110266 Sobic001G213000--Sobic010G110266 Sobic004G071650 Sobic004G071650 Sobic001G213000--Sobic004G071650 Sobic009G057000 Sobic009G057000 Sobic001G213000--Sobic009G057000 Sobic001G341550--Sobic002G200300 Sobic001G243600 Sobic001G243600 Sobic001G341550--Sobic001G243600 Sobic001G341550--Sobic004G071650 Sobic008G060050 Sobic008G060050 Sobic001G341550--Sobic008G060050 Sobic004G273400 Sobic004G273400 Sobic001G341550--Sobic004G273400 Sobic001G348700 Sobic001G348700 Sobic001G341550--Sobic001G348700 Sobic001G341550--Sobic009G057000 Sobic001G100700 Sobic001G100700 Sobic001G341550--Sobic001G100700 Sobic009G120000 Sobic009G120000 Sobic001G341550--Sobic009G120000 Sobic002G200300--Sobic001G341550 Sobic002G200300--Sobic001G243600 Sobic001G243500 Sobic001G243500 Sobic002G200300--Sobic001G243500 Sobic005G213200 Sobic005G213200 Sobic002G200300--Sobic005G213200 Sobic002G200300--Sobic009G057000 Sobic002G200300--Sobic001G100700 Sobic002G200300--Sobic004G273400 Sobic002G200300--Sobic002G128300 Sobic001G444400 Sobic001G444400 Sobic002G200300--Sobic001G444400 Sobic006G277550 Sobic006G277550 Sobic007G058300--Sobic006G277550 Sobic009G072900 Sobic009G072900 Sobic007G058300--Sobic009G072900 Sobic005G206601 Sobic005G206601 Sobic007G058300--Sobic005G206601 Sobic002G375400 Sobic002G375400 Sobic007G058300--Sobic002G375400 Sobic007G058300--Sobic005G213200 Sobic001G403000 Sobic001G403000 Sobic007G058300--Sobic001G403000 Sobic002G247600 Sobic002G247600 Sobic007G058300--Sobic002G247600 Sobic007G058300--Sobic009G120000 Sobic002G310600 Sobic002G310600 Sobic007G058300--Sobic002G310600 Sobic010G149700--Sobic004G071650 Sobic005G179200 Sobic005G179200 Sobic010G149700--Sobic005G179200 Sobic010G238900 Sobic010G238900 Sobic010G149700--Sobic010G238900 Sobic010G149700--Sobic010G110266 Sobic003G116800 Sobic003G116800 Sobic010G149700--Sobic003G116800 Sobic006G153100 Sobic006G153100 Sobic010G149700--Sobic006G153100 Sobic010G136400 Sobic010G136400 Sobic010G149700--Sobic010G136400 Sobic001G050100 Sobic001G050100 Sobic010G149700--Sobic001G050100 Sobic006G063400 Sobic006G063400 Sobic010G149700--Sobic006G063400 Sobic002G128300--Sobic006G153100 Sobic002G128300--Sobic005G179200 Sobic002G128300--Sobic001G444400 Sobic002G128300--Sobic001G243600 Sobic002G128300--Sobic009G120000 Sobic004G111800 Sobic004G111800 Sobic002G128300--Sobic004G111800 Sobic003G236450 Sobic003G236450 Sobic002G128300--Sobic003G236450 Sobic001G063000 Sobic001G063000 Sobic002G128300--Sobic001G063000 Sobic007G141500 Sobic007G141500 Sobic002G128300--Sobic007G141500 Sobic003G392800 Sobic003G392800 Sobic004G105001--Sobic003G392800 Sobic001G037600 Sobic001G037600 Sobic004G105001--Sobic001G037600 Sobic002G183100 Sobic002G183100 Sobic004G105001--Sobic002G183100 Sobic001G006101 Sobic001G006101 Sobic004G105001--Sobic001G006101 Sobic001G420600 Sobic001G420600 Sobic004G105001--Sobic001G420600 Sobic004G105001--Sobic001G213000 Sobic001G260000 Sobic001G260000 Sobic004G105001--Sobic001G260000 Sobic004G311750 Sobic004G311750 Sobic004G105001--Sobic004G311750 Sobic002G184100 Sobic002G184100 Sobic004G105001--Sobic002G184100 Sobic008G121400 Sobic008G121400 Sobic010G110266--Sobic008G121400 Sobic010G110266--Sobic006G063400 Sobic006G036500 Sobic006G036500 Sobic010G110266--Sobic006G036500 Sobic010G110266--Sobic010G136400 Sobic002G156900 Sobic002G156900 Sobic010G110266--Sobic002G156900 Sobic007G101900 Sobic007G101900 Sobic010G110266--Sobic007G101900 Sobic010G110266--Sobic010G149700 Sobic008G092932 Sobic008G092932 Sobic010G110266--Sobic008G092932 Sobic006G038800 Sobic006G038800 Sobic010G110266--Sobic006G038800 Sobic010G084100 Sobic010G084100 Sobic004G071650--Sobic010G084100 Sobic010G084700 Sobic010G084700 Sobic004G071650--Sobic010G084700 Sobic004G071650--Sobic003G116800 Sobic005G045900 Sobic005G045900 Sobic004G071650--Sobic005G045900 Sobic003G286600 Sobic003G286600 Sobic004G071650--Sobic003G286600 Sobic004G071650--Sobic001G348700 Sobic004G221500 Sobic004G221500 Sobic004G071650--Sobic004G221500 Sobic004G071650--Sobic005G206601 Sobic001G487300 Sobic001G487300 Sobic004G071650--Sobic001G487300 Sobic009G057000--Sobic002G200300 Sobic009G057000--Sobic001G341550 Sobic009G057000--Sobic002G128300 Sobic001G133532 Sobic001G133532 Sobic009G057000--Sobic001G133532 Sobic009G057000--Sobic001G243500 Sobic009G158700 Sobic009G158700 Sobic009G057000--Sobic009G158700 Sobic009G057000--Sobic001G243600 Sobic009G057000--Sobic004G273400 Sobic009G057000--Sobic001G100700
Octagon: transcription factors


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