Gene annotation
Transcriptome id Sobic.007G058300.1
Synonym Sb07g004655
Functional annotation AP2 domain containing protein, expressed
UniProt A0A1B6PFT7
Pfam PF00847
Panther DB PTHR31677 PTHR31677:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G12890 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os08g07700.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a044109 , Zm00025a011638 , Zm00025a055020 , Zm00025a029907 , Zm00025a033320 , Zm00025a055961 , Zm00025a049099 , Zm00025a037864 , Zm00025a045437
Brachypodium KQK05591 , KQK05592 , KQJ98221
Barley HORVU1Hr1G067160.1 , HORVU2Hr1G071470.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G277550 - K00430: peroxidase
2 Sobic.009G072900 calmodulin-binding protein, putative, expressed -
3 Sobic.005G206601 - -
4 Sobic.002G375400 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
5 Sobic.005G213200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein kinase family protein, putative, expressed -
6 Sobic.001G403000 expressed protein -
7 Sobic.002G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Os9bglu30 - beta-glucosidase, similar to Os4bglu12 exoglucanase, expressed K01188: beta-glucosidase
8 Sobic.009G120000 - -
9 Sobic.002G310600 chalcone synthase, putative, expressed K17212: bisdemethoxycurcumin synthase
10 Sobic.003G437100 sulfotransferase domain containing protein, expressed -
11 Sobic.001G243600 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
12 Sobic.005G084600 ARGOS, putative, expressed -
13 Sobic.001G331301 - -
14 Sobic.001G147900 cytochrome P450, putative, expressed -
15 Sobic.006G125100 ubiquitin family protein, putative, expressed -
16 Sobic.003G139300 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in flower and root, expression induced by IAA treatment"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
17 Sobic.005G043000 heat shock protein-related, putative, expressed -
18 Sobic.002G196100 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.006G243600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.004G176600 no apical meristem protein, putative, expressed -


Gene co-expression network
sample Sobic007G058300 Sobic007G058300 Sobic006G277550 Sobic006G277550 Sobic007G058300--Sobic006G277550 Sobic009G072900 Sobic009G072900 Sobic007G058300--Sobic009G072900 Sobic005G206601 Sobic005G206601 Sobic007G058300--Sobic005G206601 Sobic002G375400 Sobic002G375400 Sobic007G058300--Sobic002G375400 Sobic005G213200 Sobic005G213200 Sobic007G058300--Sobic005G213200 Sobic001G403000 Sobic001G403000 Sobic007G058300--Sobic001G403000 Sobic002G247600 Sobic002G247600 Sobic007G058300--Sobic002G247600 Sobic009G120000 Sobic009G120000 Sobic007G058300--Sobic009G120000 Sobic002G310600 Sobic002G310600 Sobic007G058300--Sobic002G310600 Sobic006G277550--Sobic009G072900 Sobic006G277550--Sobic007G058300 Sobic008G044500 Sobic008G044500 Sobic006G277550--Sobic008G044500 Sobic006G277550--Sobic005G213200 Sobic006G038800 Sobic006G038800 Sobic006G277550--Sobic006G038800 Sobic001G331301 Sobic001G331301 Sobic006G277550--Sobic001G331301 Sobic001G243600 Sobic001G243600 Sobic006G277550--Sobic001G243600 Sobic006G277550--Sobic001G403000 Sobic006G277550--Sobic002G375400 Sobic009G072900--Sobic001G403000 Sobic009G072900--Sobic002G375400 Sobic010G185000 Sobic010G185000 Sobic009G072900--Sobic010G185000 Sobic009G072900--Sobic005G206601 Sobic004G348400 Sobic004G348400 Sobic009G072900--Sobic004G348400 Sobic006G243600 Sobic006G243600 Sobic009G072900--Sobic006G243600 Sobic003G366600 Sobic003G366600 Sobic009G072900--Sobic003G366600 Sobic009G240600 Sobic009G240600 Sobic009G072900--Sobic009G240600 Sobic003G430600 Sobic003G430600 Sobic009G072900--Sobic003G430600 Sobic007G227300 Sobic007G227300 Sobic005G206601--Sobic007G227300 Sobic003G252800 Sobic003G252800 Sobic005G206601--Sobic003G252800 Sobic003G117600 Sobic003G117600 Sobic005G206601--Sobic003G117600 Sobic006G099900 Sobic006G099900 Sobic005G206601--Sobic006G099900 Sobic006G277600 Sobic006G277600 Sobic005G206601--Sobic006G277600 Sobic001G348700 Sobic001G348700 Sobic005G206601--Sobic001G348700 Sobic005G206601--Sobic009G240600 Sobic010G084700 Sobic010G084700 Sobic005G206601--Sobic010G084700 Sobic001G400800 Sobic001G400800 Sobic005G206601--Sobic001G400800 Sobic004G176600 Sobic004G176600 Sobic002G375400--Sobic004G176600 Sobic004G107700 Sobic004G107700 Sobic002G375400--Sobic004G107700 Sobic002G375400--Sobic010G185000 Sobic002G375400--Sobic005G206601 Sobic003G437200 Sobic003G437200 Sobic002G375400--Sobic003G437200 Sobic002G375400--Sobic009G072900 Sobic003G417800 Sobic003G417800 Sobic002G375400--Sobic003G417800 Sobic002G375400--Sobic001G403000 Sobic002G375400--Sobic004G348400 Sobic001G100700 Sobic001G100700 Sobic005G213200--Sobic001G100700 Sobic005G213200--Sobic001G243600 Sobic001G243500 Sobic001G243500 Sobic005G213200--Sobic001G243500 Sobic005G213200--Sobic009G120000 Sobic009G106800 Sobic009G106800 Sobic005G213200--Sobic009G106800 Sobic001G444400 Sobic001G444400 Sobic005G213200--Sobic001G444400 Sobic004G273400 Sobic004G273400 Sobic005G213200--Sobic004G273400 Sobic010G071900 Sobic010G071900 Sobic005G213200--Sobic010G071900 Sobic010G209900 Sobic010G209900 Sobic005G213200--Sobic010G209900 Sobic001G487300 Sobic001G487300 Sobic001G403000--Sobic001G487300 Sobic001G403000--Sobic009G072900 Sobic008G063400 Sobic008G063400 Sobic001G403000--Sobic008G063400 Sobic001G403000--Sobic003G437200 Sobic001G403000--Sobic005G206601 Sobic001G403000--Sobic009G240600 Sobic001G403000--Sobic002G375400 Sobic001G403000--Sobic003G417800 Sobic001G403000--Sobic010G185000 Sobic001G462700 Sobic001G462700 Sobic002G247600--Sobic001G462700 Sobic002G247600--Sobic010G185000 Sobic009G003600 Sobic009G003600 Sobic002G247600--Sobic009G003600 Sobic002G247600--Sobic004G348400 Sobic001G331200 Sobic001G331200 Sobic002G247600--Sobic001G331200 Sobic001G333400 Sobic001G333400 Sobic002G247600--Sobic001G333400 Sobic007G151300 Sobic007G151300 Sobic002G247600--Sobic007G151300 Sobic002G247600--Sobic005G206601 Sobic002G247600--Sobic003G117600 Sobic004G166700 Sobic004G166700 Sobic009G120000--Sobic004G166700 Sobic007G141500 Sobic007G141500 Sobic009G120000--Sobic007G141500 Sobic005G051200 Sobic005G051200 Sobic009G120000--Sobic005G051200 Sobic001G317200 Sobic001G317200 Sobic009G120000--Sobic001G317200 Sobic005G084600 Sobic005G084600 Sobic009G120000--Sobic005G084600 Sobic009G120000--Sobic003G117600 Sobic006G092500 Sobic006G092500 Sobic009G120000--Sobic006G092500 Sobic009G120000--Sobic001G243600 Sobic009G120000--Sobic005G213200 Sobic002G310600--Sobic004G176600 Sobic002G310600--Sobic002G247600 Sobic002G310600--Sobic005G084600 Sobic002G310600--Sobic009G072900 Sobic002G310600--Sobic005G206601 Sobic002G310600--Sobic001G403000 Sobic006G044100 Sobic006G044100 Sobic002G310600--Sobic006G044100 Sobic002G310600--Sobic003G366600 Sobic002G310600--Sobic010G185000
Octagon: transcription factors


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