Gene annotation
Transcriptome id Sobic.001G013800.2,Sobic.001G013800.1
Synonym PAP15, Sb01g001350, ATPAP15
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Ser/Thr protein phosphatase family protein, expressed
UniProt A0A1Z5S4E0 , C5WSX6
Pfam PF14008 PF16656 PF00149
Panther DB PTHR22953 PTHR22953:SF15
NCBI CDD KOG1378; Purple acid phosphatase
KEGG Orthology -
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT3G07130 : purple acid phosphatase 15
RAP-DB (Rice) LOC_Os03g63074.2,LOC_Os03g63074.1 : Ser/Thr protein phosphatase family protein, expressed
MaizeGDB (Corn) Zm00025a009021
Brachypodium KQK03980 , KQK12116 , KQK12115
Barley HORVU5Hr1G083340.8 , HORVU5Hr1G083340.1 , HORVU5Hr1G083340.3 , HORVU5Hr1G083340.2 , HORVU5Hr1G083340.5 , HORVU5Hr1G083340.4 , HORVU5Hr1G083340.7 , HORVU5Hr1G083340.6 , HORVU3Hr1G034460.8 , HORVU3Hr1G034460.9 , HORVU3Hr1G034460.4 , HORVU3Hr1G034460.5 , HORVU3Hr1G034460.6 , HORVU3Hr1G034460.7 , HORVU3Hr1G034460.1 , HORVU3Hr1G034460.2 , HORVU3Hr1G034460.3 , HORVU3Hr1G034460.13 , HORVU3Hr1G034460.18 , HORVU3Hr1G034460.16 , HORVU3Hr1G034460.17 , HORVU3Hr1G034460.14 , HORVU3Hr1G034460.15 , HORVU3Hr1G034460.12 , HORVU3Hr1G034460.10 , HORVU3Hr1G034460.11
Wheat TraesCS3A02G163900 , TraesCS3A02G163900 , TraesCS5B02G329300 , TraesCS5B02G329300 , TraesCS3D02G177900 , TraesCS5D02G335100 , TraesCS5D02G335100 , TraesCS5A02G329200 , TraesCS5A02G329200 , TraesCS5A02G329200 , TraesCS3B02G202200 , TraesCS3B02G202200
Populus -


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cDNA sequences
Sobic.001G013800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G216800 polyprenyl synthetase, putative, expressed K00787: farnesyl diphosphate synthase
2 Sobic.002G040600 zinc finger, C3HC4 type domain containing protein, expressed K19043: E3 ubiquitin-protein ligase RHF
3 Sobic.004G063500 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
4 Sobic.006G260300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@oryzain beta chain precursor, putative, expressed -
5 Sobic.003G358300 josephin, putative, expressed K11863: ATXN3, Ataxin-3
6 Sobic.006G159600 cytochrome b561, putative, expressed K08360: cytochrome b-561
7 Sobic.001G201100 cytochrome b561, putative, expressed K08360: cytochrome b-561
8 Sobic.001G191800 harpin-induced protein 1 domain containing protein, expressed -
9 Sobic.001G106400 serine esterase family protein, putative, expressed K10606: FANCL, E3 ubiquitin-protein ligase FANCL
10 Sobic.004G102900 FUWA(Ortholog in rice:Chen 2015)(PubMedID : 31659879)@"encodes an NHL domain-containing protein regulating panicle architecture, grain shape and grain weight"(PubMedID : 26043067)@NHL repeat-containing protein, putative, expressed -
11 Sobic.004G166500 N-carbamoylputrescine amidohydrolase(PubMedID : 27325899)@Up-regulated by silicon application under drought stress(PubMedID : 24813726)@N-carbamoylputrescine amidase, putative, expressed K12251: N-carbamoylputrescine amidase
12 Sobic.006G239300 thiamine-repressible mitochondrial transport protein THI74, putative, expressed K15289: solute carrier family 35, member F5
13 Sobic.001G161000 AGG2, putative, expressed -
14 Sobic.004G064900 gp176, putative, expressed -
15 Sobic.001G066700 GLTP domain containing protein, putative, expressed -
16 Sobic.003G403400 zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.001G505500 ankyrin repeat domain containing protein, expressed -
18 Sobic.004G075100 - -
19 Sobic.005G206700 WD domain, G-beta repeat domain containing protein, expressed K12602: WDR61, REC14, WD repeat-containing protein 61
20 Sobic.001G389900 aquaporin SIP2-1, putative, expressed K09875: aquaporin SIP


Gene co-expression network
sample Sobic001G013800 Sobic001G013800 Sobic009G216800 Sobic009G216800 Sobic001G013800--Sobic009G216800 Sobic002G040600 Sobic002G040600 Sobic001G013800--Sobic002G040600 Sobic004G063500 Sobic004G063500 Sobic001G013800--Sobic004G063500 Sobic006G260300 Sobic006G260300 Sobic001G013800--Sobic006G260300 Sobic003G358300 Sobic003G358300 Sobic001G013800--Sobic003G358300 Sobic006G159600 Sobic006G159600 Sobic001G013800--Sobic006G159600 Sobic001G201100 Sobic001G201100 Sobic001G013800--Sobic001G201100 Sobic001G191800 Sobic001G191800 Sobic001G013800--Sobic001G191800 Sobic001G106400 Sobic001G106400 Sobic001G013800--Sobic001G106400 Sobic002G372400 Sobic002G372400 Sobic009G216800--Sobic002G372400 Sobic002G348100 Sobic002G348100 Sobic009G216800--Sobic002G348100 Sobic003G078200 Sobic003G078200 Sobic009G216800--Sobic003G078200 Sobic002G251900 Sobic002G251900 Sobic009G216800--Sobic002G251900 Sobic008G186600 Sobic008G186600 Sobic009G216800--Sobic008G186600 Sobic004G055700 Sobic004G055700 Sobic009G216800--Sobic004G055700 Sobic006G136800 Sobic006G136800 Sobic009G216800--Sobic006G136800 Sobic001G403500 Sobic001G403500 Sobic009G216800--Sobic001G403500 Sobic003G109600 Sobic003G109600 Sobic009G216800--Sobic003G109600 Sobic004G212300 Sobic004G212300 Sobic002G040600--Sobic004G212300 Sobic001G516600 Sobic001G516600 Sobic002G040600--Sobic001G516600 Sobic004G262500 Sobic004G262500 Sobic002G040600--Sobic004G262500 Sobic010G195500 Sobic010G195500 Sobic002G040600--Sobic010G195500 Sobic007G186100 Sobic007G186100 Sobic002G040600--Sobic007G186100 Sobic003G037800 Sobic003G037800 Sobic002G040600--Sobic003G037800 Sobic003G319500 Sobic003G319500 Sobic002G040600--Sobic003G319500 Sobic005G168800 Sobic005G168800 Sobic002G040600--Sobic005G168800 Sobic002G379200 Sobic002G379200 Sobic002G040600--Sobic002G379200 Sobic009G120100 Sobic009G120100 Sobic004G063500--Sobic009G120100 Sobic003G325700 Sobic003G325700 Sobic004G063500--Sobic003G325700 Sobic003G063200 Sobic003G063200 Sobic004G063500--Sobic003G063200 Sobic001G066700 Sobic001G066700 Sobic004G063500--Sobic001G066700 Sobic010G266300 Sobic010G266300 Sobic004G063500--Sobic010G266300 Sobic004G063500--Sobic009G216800 Sobic003G403400 Sobic003G403400 Sobic004G063500--Sobic003G403400 Sobic002G113500 Sobic002G113500 Sobic004G063500--Sobic002G113500 Sobic006G231700 Sobic006G231700 Sobic004G063500--Sobic006G231700 Sobic005G080900 Sobic005G080900 Sobic006G260300--Sobic005G080900 Sobic008G025600 Sobic008G025600 Sobic006G260300--Sobic008G025600 Sobic003G174700 Sobic003G174700 Sobic006G260300--Sobic003G174700 Sobic004G217450 Sobic004G217450 Sobic006G260300--Sobic004G217450 Sobic006G137800 Sobic006G137800 Sobic006G260300--Sobic006G137800 Sobic004G064900 Sobic004G064900 Sobic006G260300--Sobic004G064900 Sobic006G149200 Sobic006G149200 Sobic006G260300--Sobic006G149200 Sobic006G260300--Sobic006G159600 Sobic004G274900 Sobic004G274900 Sobic006G260300--Sobic004G274900 Sobic003G358300--Sobic001G066700 Sobic003G358300--Sobic006G231700 Sobic005G111100 Sobic005G111100 Sobic003G358300--Sobic005G111100 Sobic002G044000 Sobic002G044000 Sobic003G358300--Sobic002G044000 Sobic004G032000 Sobic004G032000 Sobic003G358300--Sobic004G032000 Sobic004G166500 Sobic004G166500 Sobic003G358300--Sobic004G166500 Sobic002G386300 Sobic002G386300 Sobic003G358300--Sobic002G386300 Sobic007G163700 Sobic007G163700 Sobic003G358300--Sobic007G163700 Sobic009G191200 Sobic009G191200 Sobic003G358300--Sobic009G191200 Sobic006G159600--Sobic006G137800 Sobic006G159600--Sobic002G348100 Sobic003G125650 Sobic003G125650 Sobic006G159600--Sobic003G125650 Sobic006G067800 Sobic006G067800 Sobic006G159600--Sobic006G067800 Sobic004G321300 Sobic004G321300 Sobic006G159600--Sobic004G321300 Sobic006G159600--Sobic008G025600 Sobic007G197800 Sobic007G197800 Sobic006G159600--Sobic007G197800 Sobic009G159400 Sobic009G159400 Sobic006G159600--Sobic009G159400 Sobic001G464900 Sobic001G464900 Sobic006G159600--Sobic001G464900 Sobic003G233500 Sobic003G233500 Sobic001G201100--Sobic003G233500 Sobic001G201100--Sobic004G166500 Sobic001G505500 Sobic001G505500 Sobic001G201100--Sobic001G505500 Sobic010G106200 Sobic010G106200 Sobic001G201100--Sobic010G106200 Sobic001G340500 Sobic001G340500 Sobic001G201100--Sobic001G340500 Sobic006G137100 Sobic006G137100 Sobic001G201100--Sobic006G137100 Sobic001G201100--Sobic010G266300 Sobic007G078100 Sobic007G078100 Sobic001G201100--Sobic007G078100 Sobic010G153100 Sobic010G153100 Sobic001G201100--Sobic010G153100 Sobic001G161000 Sobic001G161000 Sobic001G191800--Sobic001G161000 Sobic002G290500 Sobic002G290500 Sobic001G191800--Sobic002G290500 Sobic004G085700 Sobic004G085700 Sobic001G191800--Sobic004G085700 Sobic001G191800--Sobic001G013800 Sobic002G419500 Sobic002G419500 Sobic001G191800--Sobic002G419500 Sobic001G191800--Sobic001G106400 Sobic006G170400 Sobic006G170400 Sobic001G191800--Sobic006G170400 Sobic009G170800 Sobic009G170800 Sobic001G191800--Sobic009G170800 Sobic001G101200 Sobic001G101200 Sobic001G191800--Sobic001G101200 Sobic004G067900 Sobic004G067900 Sobic001G106400--Sobic004G067900 Sobic002G308400 Sobic002G308400 Sobic001G106400--Sobic002G308400 Sobic006G096300 Sobic006G096300 Sobic001G106400--Sobic006G096300 Sobic006G066600 Sobic006G066600 Sobic001G106400--Sobic006G066600 Sobic002G393600 Sobic002G393600 Sobic001G106400--Sobic002G393600 Sobic010G168200 Sobic010G168200 Sobic001G106400--Sobic010G168200 Sobic009G232800 Sobic009G232800 Sobic001G106400--Sobic009G232800 Sobic004G102900 Sobic004G102900 Sobic001G106400--Sobic004G102900 Sobic009G070200 Sobic009G070200 Sobic001G106400--Sobic009G070200
Octagon: transcription factors


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