Gene annotation
Transcriptome id Sobic.009G170800.1
Synonym Sb09g023190, dehydration response element binding (DREB) transcription factor, (SbDREB2);ethylene response factor 96, SbERF96
Functional annotation "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. " (PubMedID : 24086146)
Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt C5YZQ0
Pfam PF00847
Panther DB PTHR31241 PTHR31241:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G75490 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os05g39590.2 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a000875 , Zm00025a043959 , Zm00025a030489 , Zm00025a005513
Brachypodium KQK02836
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G067900 expressed protein -
2 Sobic.009G216800 polyprenyl synthetase, putative, expressed K00787: farnesyl diphosphate synthase
3 Sobic.002G308400 "MYB transcription factor(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659858)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.010G196800 OsFBX436 - F-box domain containing protein, expressed -
5 Sobic.002G419500 HAD superfamily phosphatase, putative, expressed -
6 Sobic.004G318400 MTD1, putative, expressed -
7 Sobic.006G066600 DNA-binding protein S1FA, putative, expressed -
8 Sobic.001G106400 serine esterase family protein, putative, expressed K10606: FANCL, E3 ubiquitin-protein ligase FANCL
9 Sobic.004G102900 FUWA(Ortholog in rice:Chen 2015)(PubMedID : 31659879)@"encodes an NHL domain-containing protein regulating panicle architecture, grain shape and grain weight"(PubMedID : 26043067)@NHL repeat-containing protein, putative, expressed -
10 Sobic.001G154400 expp1 protein precursor, putative, expressed -
11 Sobic.001G050900 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
12 Sobic.002G393600 GDSL-like lipase/acylhydrolase, putative, expressed -
13 Sobic.004G085700 expressed protein -
14 Sobic.007G034600 U box protein 8, putative, expressed -
15 Sobic.005G123500 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
16 Sobic.005G064200 eukaryotic aspartyl protease domain containing protein, expressed -
17 Sobic.002G113500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@RALFL4 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
18 Sobic.007G194100 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
19 Sobic.010G198800 expressed protein -
20 Sobic.007G208200 expressed protein -


Gene co-expression network
sample Sobic009G170800 Sobic009G170800 Sobic004G067900 Sobic004G067900 Sobic009G170800--Sobic004G067900 Sobic009G216800 Sobic009G216800 Sobic009G170800--Sobic009G216800 Sobic002G308400 Sobic002G308400 Sobic009G170800--Sobic002G308400 Sobic010G196800 Sobic010G196800 Sobic009G170800--Sobic010G196800 Sobic002G419500 Sobic002G419500 Sobic009G170800--Sobic002G419500 Sobic004G318400 Sobic004G318400 Sobic009G170800--Sobic004G318400 Sobic006G066600 Sobic006G066600 Sobic009G170800--Sobic006G066600 Sobic001G106400 Sobic001G106400 Sobic009G170800--Sobic001G106400 Sobic004G102900 Sobic004G102900 Sobic009G170800--Sobic004G102900 Sobic004G067900--Sobic002G308400 Sobic006G244500 Sobic006G244500 Sobic004G067900--Sobic006G244500 Sobic007G194100 Sobic007G194100 Sobic004G067900--Sobic007G194100 Sobic003G062200 Sobic003G062200 Sobic004G067900--Sobic003G062200 Sobic003G295000 Sobic003G295000 Sobic004G067900--Sobic003G295000 Sobic004G067900--Sobic006G066600 Sobic002G240800 Sobic002G240800 Sobic004G067900--Sobic002G240800 Sobic007G034600 Sobic007G034600 Sobic004G067900--Sobic007G034600 Sobic004G067900--Sobic001G106400 Sobic002G372400 Sobic002G372400 Sobic009G216800--Sobic002G372400 Sobic002G348100 Sobic002G348100 Sobic009G216800--Sobic002G348100 Sobic003G078200 Sobic003G078200 Sobic009G216800--Sobic003G078200 Sobic002G251900 Sobic002G251900 Sobic009G216800--Sobic002G251900 Sobic008G186600 Sobic008G186600 Sobic009G216800--Sobic008G186600 Sobic004G055700 Sobic004G055700 Sobic009G216800--Sobic004G055700 Sobic006G136800 Sobic006G136800 Sobic009G216800--Sobic006G136800 Sobic001G403500 Sobic001G403500 Sobic009G216800--Sobic001G403500 Sobic003G109600 Sobic003G109600 Sobic009G216800--Sobic003G109600 Sobic002G308400--Sobic004G067900 Sobic002G308400--Sobic007G194100 Sobic002G308400--Sobic006G244500 Sobic002G308400--Sobic001G106400 Sobic002G308400--Sobic003G295000 Sobic002G240700 Sobic002G240700 Sobic002G308400--Sobic002G240700 Sobic010G037200 Sobic010G037200 Sobic002G308400--Sobic010G037200 Sobic001G442200 Sobic001G442200 Sobic002G308400--Sobic001G442200 Sobic002G308400--Sobic006G066600 Sobic003G325700 Sobic003G325700 Sobic010G196800--Sobic003G325700 Sobic009G131400 Sobic009G131400 Sobic010G196800--Sobic009G131400 Sobic001G050900 Sobic001G050900 Sobic010G196800--Sobic001G050900 Sobic003G146400 Sobic003G146400 Sobic010G196800--Sobic003G146400 Sobic005G064200 Sobic005G064200 Sobic010G196800--Sobic005G064200 Sobic008G111500 Sobic008G111500 Sobic010G196800--Sobic008G111500 Sobic010G196800--Sobic009G216800 Sobic010G196800--Sobic009G170800 Sobic001G389900 Sobic001G389900 Sobic010G196800--Sobic001G389900 Sobic002G290500 Sobic002G290500 Sobic002G419500--Sobic002G290500 Sobic004G225800 Sobic004G225800 Sobic002G419500--Sobic004G225800 Sobic007G074200 Sobic007G074200 Sobic002G419500--Sobic007G074200 Sobic002G419500--Sobic009G170800 Sobic002G419500--Sobic004G102900 Sobic002G419500--Sobic006G066600 Sobic002G419500--Sobic004G067900 Sobic004G056201 Sobic004G056201 Sobic002G419500--Sobic004G056201 Sobic002G419500--Sobic002G308400 Sobic004G318400--Sobic004G102900 Sobic007G208200 Sobic007G208200 Sobic004G318400--Sobic007G208200 Sobic003G304500 Sobic003G304500 Sobic004G318400--Sobic003G304500 Sobic004G274500 Sobic004G274500 Sobic004G318400--Sobic004G274500 Sobic004G318400--Sobic006G066600 Sobic004G196800 Sobic004G196800 Sobic004G318400--Sobic004G196800 Sobic009G025100 Sobic009G025100 Sobic004G318400--Sobic009G025100 Sobic004G155300 Sobic004G155300 Sobic004G318400--Sobic004G155300 Sobic004G318400--Sobic007G194100 Sobic006G066600--Sobic004G318400 Sobic006G066600--Sobic004G067900 Sobic006G066600--Sobic004G102900 Sobic006G066600--Sobic006G244500 Sobic007G018000 Sobic007G018000 Sobic006G066600--Sobic007G018000 Sobic004G028800 Sobic004G028800 Sobic006G066600--Sobic004G028800 Sobic001G488200 Sobic001G488200 Sobic006G066600--Sobic001G488200 Sobic006G066600--Sobic004G155300 Sobic006G066600--Sobic002G308400 Sobic001G106400--Sobic004G067900 Sobic001G106400--Sobic002G308400 Sobic006G096300 Sobic006G096300 Sobic001G106400--Sobic006G096300 Sobic001G106400--Sobic006G066600 Sobic002G393600 Sobic002G393600 Sobic001G106400--Sobic002G393600 Sobic010G168200 Sobic010G168200 Sobic001G106400--Sobic010G168200 Sobic009G232800 Sobic009G232800 Sobic001G106400--Sobic009G232800 Sobic001G106400--Sobic004G102900 Sobic009G070200 Sobic009G070200 Sobic001G106400--Sobic009G070200 Sobic004G102900--Sobic004G318400 Sobic004G102900--Sobic007G208200 Sobic004G102900--Sobic001G050900 Sobic001G154400 Sobic001G154400 Sobic004G102900--Sobic001G154400 Sobic004G102900--Sobic006G066600 Sobic004G102900--Sobic002G240700 Sobic004G102900--Sobic003G304500 Sobic004G102900--Sobic007G194100 Sobic002G113500 Sobic002G113500 Sobic004G102900--Sobic002G113500
Octagon: transcription factors


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