Gene annotation
Transcriptome id Sobic.005G123500.1
Synonym SbSWEET5-1;Sugars Will Eventually Be Exported Transporters, SbSWEET5-1, Sb05g018110
Functional annotation Sugar transporter (PubMedID : 27330561)
Sugar transporter (PubMedID : 27330561)
nodulin MtN3 family protein, putative, expressed
UniProt A0A1B6PRZ3
Pfam PF03083
Panther DB PTHR10791 PTHR10791:SF56
NCBI CDD KOG1623; Multitransmembrane protein
KEGG Orthology K15382; SLC50A, solute carrier family 50 (sugar transporter)
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G48740 : Nodulin MtN3 family protein
RAP-DB (Rice) LOC_Os11g31190.1 : nodulin MtN3 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a024896 , Zm00025a029785 , Zm00025a054138 , Zm00025a054136 , Zm00025a015665
Brachypodium KQJ88471 , KQJ86763
Barley HORVU6Hr1G089540.6 , HORVU6Hr1G089540.4 , HORVU6Hr1G089540.5 , HORVU6Hr1G089540.2 , HORVU6Hr1G089540.3 , HORVU6Hr1G089540.1 , HORVU7Hr1G030160.1 , HORVU7Hr1G030160.3 , HORVU7Hr1G030160.2 , HORVU7Hr1G030160.4 , HORVU7Hr1G030160.7 , HORVU7Hr1G030160.6 , HORVU7Hr1G030160.8 , HORVU1Hr1G010210.7 , HORVU1Hr1G010210.6 , HORVU1Hr1G010210.5 , HORVU1Hr1G010210.4 , HORVU1Hr1G010210.3 , HORVU1Hr1G010210.2 , HORVU1Hr1G010210.1 , HORVU6Hr1G089600.4 , HORVU6Hr1G089600.1 , HORVU6Hr1G089600.3 , HORVU6Hr1G089600.2
Wheat TraesCS6D02G009600 , TraesCS6D02G012100 , TraesCS1D02G052700 , TraesCS6B02G421600 , TraesCS6A02G382600 , TraesCS6A02G382600 , TraesCS6B02G421700 , TraesCS6B02G421500 , TraesCS6D02G367300 , TraesCSU02G206000 , TraesCS6B02G015300 , TraesCS6D02G367400 , TraesCS6D02G009500 , TraesCS6D02G367200 , TraesCS6D02G367200 , TraesCS6B02G421800 , TraesCS6A02G382400 , TraesCS1B02G066900 , TraesCS1A02G050400 , TraesCS6B02G015100 , TraesCS6A02G382500 , TraesCS6A02G382500
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G393600 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.004G085700 expressed protein -
3 Sobic.002G387900 expressed protein -
4 Sobic.009G216800 polyprenyl synthetase, putative, expressed K00787: farnesyl diphosphate synthase
5 Sobic.009G170800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
6 Sobic.010G027300 DNA binding protein, putative, expressed -
7 Sobic.008G147900 phosphoribosyl transferase, putative, expressed K00759: APRT, adenine phosphoribosyltransferase
8 Sobic.002G040600 zinc finger, C3HC4 type domain containing protein, expressed K19043: E3 ubiquitin-protein ligase RHF
9 Sobic.002G251900 chaperone protein dnaJ 10, putative, expressed -
10 Sobic.009G181800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 9484480)@cytochrome P450, putative, expressed K09754: CYP98A, 5-O-(4-coumaroyl)-D-quinate 3'-monooxygenase
11 Sobic.001G161000 AGG2, putative, expressed -
12 Sobic.004G212300 determined the crystal structures of SbHCT in its apo-form and ternary complex with shikimate and p-coumaroyl-CoA(PubMedID : 23624856)@"shikimate hydroxycinnamoyl transferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
13 Sobic.006G078100 FAD binding domain containing protein, expressed -
14 Sobic.001G294400 CAMK_CAMK_like.41 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
15 Sobic.005G170100 phosphoesterase family protein, putative, expressed K01114: phospholipase C
16 Sobic.001G106400 serine esterase family protein, putative, expressed K10606: FANCL, E3 ubiquitin-protein ligase FANCL
17 Sobic.004G067900 expressed protein -
18 Sobic.001G197400 actin, putative, expressed K10355: actin, other eukaryote
19 Sobic.001G514200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.007G034600 U box protein 8, putative, expressed -


Gene co-expression network
sample Sobic005G123500 Sobic005G123500 Sobic002G393600 Sobic002G393600 Sobic005G123500--Sobic002G393600 Sobic004G085700 Sobic004G085700 Sobic005G123500--Sobic004G085700 Sobic002G387900 Sobic002G387900 Sobic005G123500--Sobic002G387900 Sobic009G216800 Sobic009G216800 Sobic005G123500--Sobic009G216800 Sobic009G170800 Sobic009G170800 Sobic005G123500--Sobic009G170800 Sobic010G027300 Sobic010G027300 Sobic005G123500--Sobic010G027300 Sobic008G147900 Sobic008G147900 Sobic005G123500--Sobic008G147900 Sobic002G040600 Sobic002G040600 Sobic005G123500--Sobic002G040600 Sobic002G251900 Sobic002G251900 Sobic005G123500--Sobic002G251900 Sobic007G074200 Sobic007G074200 Sobic002G393600--Sobic007G074200 Sobic002G338250 Sobic002G338250 Sobic002G393600--Sobic002G338250 Sobic004G117600 Sobic004G117600 Sobic002G393600--Sobic004G117600 Sobic008G111500 Sobic008G111500 Sobic002G393600--Sobic008G111500 Sobic001G488000 Sobic001G488000 Sobic002G393600--Sobic001G488000 Sobic009G131400 Sobic009G131400 Sobic002G393600--Sobic009G131400 Sobic003G146400 Sobic003G146400 Sobic002G393600--Sobic003G146400 Sobic006G198800 Sobic006G198800 Sobic002G393600--Sobic006G198800 Sobic006G136800 Sobic006G136800 Sobic002G393600--Sobic006G136800 Sobic004G085700--Sobic010G027300 Sobic001G161000 Sobic001G161000 Sobic004G085700--Sobic001G161000 Sobic006G096600 Sobic006G096600 Sobic004G085700--Sobic006G096600 Sobic005G170100 Sobic005G170100 Sobic004G085700--Sobic005G170100 Sobic004G085700--Sobic002G393600 Sobic004G085700--Sobic005G123500 Sobic004G024100 Sobic004G024100 Sobic004G085700--Sobic004G024100 Sobic005G120500 Sobic005G120500 Sobic004G085700--Sobic005G120500 Sobic004G085700--Sobic009G170800 Sobic010G221300 Sobic010G221300 Sobic002G387900--Sobic010G221300 Sobic003G160700 Sobic003G160700 Sobic002G387900--Sobic003G160700 Sobic003G027400 Sobic003G027400 Sobic002G387900--Sobic003G027400 Sobic001G031700 Sobic001G031700 Sobic002G387900--Sobic001G031700 Sobic001G304100 Sobic001G304100 Sobic002G387900--Sobic001G304100 Sobic009G188000 Sobic009G188000 Sobic002G387900--Sobic009G188000 Sobic002G387900--Sobic002G251900 Sobic001G481000 Sobic001G481000 Sobic002G387900--Sobic001G481000 Sobic001G313600 Sobic001G313600 Sobic002G387900--Sobic001G313600 Sobic002G372400 Sobic002G372400 Sobic009G216800--Sobic002G372400 Sobic002G348100 Sobic002G348100 Sobic009G216800--Sobic002G348100 Sobic003G078200 Sobic003G078200 Sobic009G216800--Sobic003G078200 Sobic009G216800--Sobic002G251900 Sobic008G186600 Sobic008G186600 Sobic009G216800--Sobic008G186600 Sobic004G055700 Sobic004G055700 Sobic009G216800--Sobic004G055700 Sobic009G216800--Sobic006G136800 Sobic001G403500 Sobic001G403500 Sobic009G216800--Sobic001G403500 Sobic003G109600 Sobic003G109600 Sobic009G216800--Sobic003G109600 Sobic004G067900 Sobic004G067900 Sobic009G170800--Sobic004G067900 Sobic009G170800--Sobic009G216800 Sobic002G308400 Sobic002G308400 Sobic009G170800--Sobic002G308400 Sobic010G196800 Sobic010G196800 Sobic009G170800--Sobic010G196800 Sobic002G419500 Sobic002G419500 Sobic009G170800--Sobic002G419500 Sobic004G318400 Sobic004G318400 Sobic009G170800--Sobic004G318400 Sobic006G066600 Sobic006G066600 Sobic009G170800--Sobic006G066600 Sobic001G106400 Sobic001G106400 Sobic009G170800--Sobic001G106400 Sobic004G102900 Sobic004G102900 Sobic009G170800--Sobic004G102900 Sobic003G205600 Sobic003G205600 Sobic010G027300--Sobic003G205600 Sobic001G264000 Sobic001G264000 Sobic010G027300--Sobic001G264000 Sobic004G348800 Sobic004G348800 Sobic010G027300--Sobic004G348800 Sobic003G093700 Sobic003G093700 Sobic010G027300--Sobic003G093700 Sobic003G269600 Sobic003G269600 Sobic010G027300--Sobic003G269600 Sobic010G212500 Sobic010G212500 Sobic010G027300--Sobic010G212500 Sobic002G404100 Sobic002G404100 Sobic010G027300--Sobic002G404100 Sobic001G430100 Sobic001G430100 Sobic010G027300--Sobic001G430100 Sobic004G249000 Sobic004G249000 Sobic010G027300--Sobic004G249000 Sobic001G438200 Sobic001G438200 Sobic008G147900--Sobic001G438200 Sobic001G058300 Sobic001G058300 Sobic008G147900--Sobic001G058300 Sobic003G140700 Sobic003G140700 Sobic008G147900--Sobic003G140700 Sobic007G158600 Sobic007G158600 Sobic008G147900--Sobic007G158600 Sobic006G174300 Sobic006G174300 Sobic008G147900--Sobic006G174300 Sobic003G319400 Sobic003G319400 Sobic008G147900--Sobic003G319400 Sobic006G003100 Sobic006G003100 Sobic008G147900--Sobic006G003100 Sobic003G257400 Sobic003G257400 Sobic008G147900--Sobic003G257400 Sobic004G209400 Sobic004G209400 Sobic008G147900--Sobic004G209400 Sobic004G212300 Sobic004G212300 Sobic002G040600--Sobic004G212300 Sobic001G516600 Sobic001G516600 Sobic002G040600--Sobic001G516600 Sobic004G262500 Sobic004G262500 Sobic002G040600--Sobic004G262500 Sobic010G195500 Sobic010G195500 Sobic002G040600--Sobic010G195500 Sobic007G186100 Sobic007G186100 Sobic002G040600--Sobic007G186100 Sobic003G037800 Sobic003G037800 Sobic002G040600--Sobic003G037800 Sobic003G319500 Sobic003G319500 Sobic002G040600--Sobic003G319500 Sobic005G168800 Sobic005G168800 Sobic002G040600--Sobic005G168800 Sobic002G379200 Sobic002G379200 Sobic002G040600--Sobic002G379200 Sobic002G393400 Sobic002G393400 Sobic002G251900--Sobic002G393400 Sobic003G393900 Sobic003G393900 Sobic002G251900--Sobic003G393900 Sobic009G181800 Sobic009G181800 Sobic002G251900--Sobic009G181800 Sobic002G251900--Sobic002G387900 Sobic005G011300 Sobic005G011300 Sobic002G251900--Sobic005G011300 Sobic001G459800 Sobic001G459800 Sobic002G251900--Sobic001G459800 Sobic004G306300 Sobic004G306300 Sobic002G251900--Sobic004G306300 Sobic010G204500 Sobic010G204500 Sobic002G251900--Sobic010G204500 Sobic004G171400 Sobic004G171400 Sobic002G251900--Sobic004G171400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.