Gene annotation
Transcriptome id Sobic.008G147900.1
Synonym Sb08g019790, ATAPT1, APT1
Functional annotation phosphoribosyl transferase, putative, expressed
UniProt C5YQV9
Pfam PF00156
Panther DB PTHR11776 PTHR11776:SF8
NCBI CDD KOG1712; Adenine phosphoribosyl transferases
KEGG Orthology K00759; APRT, adenine phosphoribosyltransferase
Gene Ontology GO:0009116; nucleoside metabolic process


Orthologs (automatic annotation)
TAIR AT1G27450 : adenine phosphoribosyl transferase 1
RAP-DB (Rice) LOC_Os12g39860.1 : phosphoribosyl transferase, putative, expressed
MaizeGDB (Corn) Zm00025a025194 , Zm00025a004484
Brachypodium KQJ86061
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.008G147900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G438200 expressed protein -
2 Sobic.001G058300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
3 Sobic.003G140700 peroxidase precursor, putative, expressed -
4 Sobic.007G158600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@patatin, putative, expressed -
5 Sobic.006G174300 cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
6 Sobic.003G319400 receptor protein kinase, putative, expressed -
7 Sobic.006G003100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1295 domain containing protein, putative, expressed -
8 Sobic.003G257400 "BG3(Ortholog in rice:Xiao et al., 20018)"(PubMedID : 31659870)@purine permease, putative, expressed -
9 Sobic.004G209400 carbonyl reductase 3, putative, expressed -
10 Sobic.004G322100 hypro1, putative, expressed -
11 Sobic.009G219200 expressed protein -
12 Sobic.005G202300 integral membrane protein TIGR01569 containing protein, expressed -
13 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -
14 Sobic.006G106900 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
15 Sobic.007G158800 patatin, putative, expressed -
16 Sobic.009G199001 - -
17 Sobic.002G255000 AIR12, putative, expressed -
18 Sobic.005G166700 sulfotransferase domain containing protein, expressed -
19 Sobic.001G238200 expansin precursor, putative, expressed -
20 Sobic.002G183700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase precursor, putative, expressed -


Gene co-expression network
sample Sobic008G147900 Sobic008G147900 Sobic001G438200 Sobic001G438200 Sobic008G147900--Sobic001G438200 Sobic001G058300 Sobic001G058300 Sobic008G147900--Sobic001G058300 Sobic003G140700 Sobic003G140700 Sobic008G147900--Sobic003G140700 Sobic007G158600 Sobic007G158600 Sobic008G147900--Sobic007G158600 Sobic006G174300 Sobic006G174300 Sobic008G147900--Sobic006G174300 Sobic003G319400 Sobic003G319400 Sobic008G147900--Sobic003G319400 Sobic006G003100 Sobic006G003100 Sobic008G147900--Sobic006G003100 Sobic003G257400 Sobic003G257400 Sobic008G147900--Sobic003G257400 Sobic004G209400 Sobic004G209400 Sobic008G147900--Sobic004G209400 Sobic003G064800 Sobic003G064800 Sobic001G438200--Sobic003G064800 Sobic002G255000 Sobic002G255000 Sobic001G438200--Sobic002G255000 Sobic001G438200--Sobic003G140700 Sobic001G438200--Sobic003G319400 Sobic009G219200 Sobic009G219200 Sobic001G438200--Sobic009G219200 Sobic006G106900 Sobic006G106900 Sobic001G438200--Sobic006G106900 Sobic004G306900 Sobic004G306900 Sobic001G438200--Sobic004G306900 Sobic006G273300 Sobic006G273300 Sobic001G438200--Sobic006G273300 Sobic004G322100 Sobic004G322100 Sobic001G438200--Sobic004G322100 Sobic001G238200 Sobic001G238200 Sobic001G058300--Sobic001G238200 Sobic001G058300--Sobic001G438200 Sobic001G058300--Sobic003G140700 Sobic001G058300--Sobic003G319400 Sobic001G058300--Sobic004G306900 Sobic005G202300 Sobic005G202300 Sobic001G058300--Sobic005G202300 Sobic003G282200 Sobic003G282200 Sobic001G058300--Sobic003G282200 Sobic001G058300--Sobic006G106900 Sobic001G058300--Sobic006G174300 Sobic003G140700--Sobic009G219200 Sobic003G140700--Sobic003G064800 Sobic006G225500 Sobic006G225500 Sobic003G140700--Sobic006G225500 Sobic003G140700--Sobic004G322100 Sobic003G140700--Sobic001G438200 Sobic003G140700--Sobic002G255000 Sobic003G140700--Sobic001G238200 Sobic005G127400 Sobic005G127400 Sobic003G140700--Sobic005G127400 Sobic004G110700 Sobic004G110700 Sobic003G140700--Sobic004G110700 Sobic007G158600--Sobic001G438200 Sobic008G019800 Sobic008G019800 Sobic007G158600--Sobic008G019800 Sobic007G158600--Sobic003G319400 Sobic007G158600--Sobic003G282200 Sobic007G158600--Sobic005G202300 Sobic007G158600--Sobic001G058300 Sobic005G222500 Sobic005G222500 Sobic007G158600--Sobic005G222500 Sobic005G160700 Sobic005G160700 Sobic007G158600--Sobic005G160700 Sobic002G183700 Sobic002G183700 Sobic007G158600--Sobic002G183700 Sobic006G277700 Sobic006G277700 Sobic006G174300--Sobic006G277700 Sobic006G174300--Sobic005G202300 Sobic006G174300--Sobic001G058300 Sobic003G053600 Sobic003G053600 Sobic006G174300--Sobic003G053600 Sobic006G174300--Sobic003G319400 Sobic003G353200 Sobic003G353200 Sobic006G174300--Sobic003G353200 Sobic010G031700 Sobic010G031700 Sobic006G174300--Sobic010G031700 Sobic001G379400 Sobic001G379400 Sobic006G174300--Sobic001G379400 Sobic002G377700 Sobic002G377700 Sobic006G174300--Sobic002G377700 Sobic003G319400--Sobic006G106900 Sobic003G319400--Sobic005G202300 Sobic003G319400--Sobic004G306900 Sobic003G319400--Sobic001G438200 Sobic009G181600 Sobic009G181600 Sobic003G319400--Sobic009G181600 Sobic007G086300 Sobic007G086300 Sobic003G319400--Sobic007G086300 Sobic003G319400--Sobic003G282200 Sobic003G319400--Sobic003G064800 Sobic003G280000 Sobic003G280000 Sobic003G319400--Sobic003G280000 Sobic003G000100 Sobic003G000100 Sobic006G003100--Sobic003G000100 Sobic010G152400 Sobic010G152400 Sobic006G003100--Sobic010G152400 Sobic006G003100--Sobic010G031700 Sobic004G106100 Sobic004G106100 Sobic006G003100--Sobic004G106100 Sobic006G003100--Sobic007G086300 Sobic002G233200 Sobic002G233200 Sobic006G003100--Sobic002G233200 Sobic006G003100--Sobic004G322100 Sobic006G003100--Sobic004G306900 Sobic007G158800 Sobic007G158800 Sobic006G003100--Sobic007G158800 Sobic003G257400--Sobic003G000100 Sobic003G257400--Sobic007G086300 Sobic003G257400--Sobic004G106100 Sobic003G257400--Sobic006G106900 Sobic001G414800 Sobic001G414800 Sobic003G257400--Sobic001G414800 Sobic003G257400--Sobic003G353200 Sobic003G257400--Sobic003G280000 Sobic003G257400--Sobic006G003100 Sobic003G257400--Sobic004G306900 Sobic004G209400--Sobic003G140700 Sobic004G209400--Sobic001G438200 Sobic004G209400--Sobic009G219200 Sobic004G209400--Sobic002G183700 Sobic004G209400--Sobic002G255000 Sobic004G209400--Sobic001G058300 Sobic007G090469 Sobic007G090469 Sobic004G209400--Sobic007G090469 Sobic002G042200 Sobic002G042200 Sobic004G209400--Sobic002G042200 Sobic004G209400--Sobic003G282200
Octagon: transcription factors


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