Gene annotation
Transcriptome id Sobic.002G387900.1
Synonym Sb02g040410
Functional annotation expressed protein
UniProt C5X392
Pfam -
Panther DB PTHR35123 PTHR35123:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g44010.1 : expressed protein
MaizeGDB (Corn) Zm00025a048879
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G221300 expressed protein -
2 Sobic.003G160700 RALFL8 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
3 Sobic.003G027400 VQ domain containing protein, putative, expressed -
4 Sobic.001G031700 nucleobase-ascorbate transporter, putative, expressed -
5 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
6 Sobic.009G188000 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
7 Sobic.002G251900 chaperone protein dnaJ 10, putative, expressed -
8 Sobic.001G481000 expressed protein -
9 Sobic.001G313600 heavy metal-associated domain containing protein, expressed -
10 Sobic.001G302600 LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.002G213600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR38 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
12 Sobic.003G084400 ZOS1-03 - C2H2 zinc finger protein, expressed -
13 Sobic.001G112100 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
14 Sobic.004G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
15 Sobic.004G310200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@receptor-like protein kinase like protein, putative, expressed -
16 Sobic.009G181800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 9484480)@cytochrome P450, putative, expressed K09754: CYP98A, 5-O-(4-coumaroyl)-D-quinate 3'-monooxygenase
17 Sobic.005G107900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
18 Sobic.004G041900 apoptosis-inducing factor 2, putative, expressed -
19 Sobic.001G310300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.001G295200 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase


Gene co-expression network
sample Sobic002G387900 Sobic002G387900 Sobic010G221300 Sobic010G221300 Sobic002G387900--Sobic010G221300 Sobic003G160700 Sobic003G160700 Sobic002G387900--Sobic003G160700 Sobic003G027400 Sobic003G027400 Sobic002G387900--Sobic003G027400 Sobic001G031700 Sobic001G031700 Sobic002G387900--Sobic001G031700 Sobic001G304100 Sobic001G304100 Sobic002G387900--Sobic001G304100 Sobic009G188000 Sobic009G188000 Sobic002G387900--Sobic009G188000 Sobic002G251900 Sobic002G251900 Sobic002G387900--Sobic002G251900 Sobic001G481000 Sobic001G481000 Sobic002G387900--Sobic001G481000 Sobic001G313600 Sobic001G313600 Sobic002G387900--Sobic001G313600 Sobic006G191800 Sobic006G191800 Sobic010G221300--Sobic006G191800 Sobic004G041900 Sobic004G041900 Sobic010G221300--Sobic004G041900 Sobic010G221300--Sobic001G031700 Sobic010G047100 Sobic010G047100 Sobic010G221300--Sobic010G047100 Sobic010G221300--Sobic003G160700 Sobic003G125650 Sobic003G125650 Sobic010G221300--Sobic003G125650 Sobic004G203700 Sobic004G203700 Sobic010G221300--Sobic004G203700 Sobic009G184000 Sobic009G184000 Sobic010G221300--Sobic009G184000 Sobic010G221300--Sobic002G387900 Sobic005G113300 Sobic005G113300 Sobic003G160700--Sobic005G113300 Sobic003G160700--Sobic004G041900 Sobic003G160700--Sobic003G125650 Sobic003G078200 Sobic003G078200 Sobic003G160700--Sobic003G078200 Sobic001G475500 Sobic001G475500 Sobic003G160700--Sobic001G475500 Sobic001G502900 Sobic001G502900 Sobic003G160700--Sobic001G502900 Sobic004G220000 Sobic004G220000 Sobic003G160700--Sobic004G220000 Sobic003G160700--Sobic009G188000 Sobic003G436700 Sobic003G436700 Sobic003G160700--Sobic003G436700 Sobic003G027400--Sobic003G160700 Sobic006G249300 Sobic006G249300 Sobic003G027400--Sobic006G249300 Sobic009G248100 Sobic009G248100 Sobic003G027400--Sobic009G248100 Sobic003G027400--Sobic010G221300 Sobic003G027400--Sobic001G481000 Sobic003G027400--Sobic005G113300 Sobic003G027400--Sobic002G387900 Sobic003G084400 Sobic003G084400 Sobic003G027400--Sobic003G084400 Sobic002G200600 Sobic002G200600 Sobic003G027400--Sobic002G200600 Sobic001G031700--Sobic004G041900 Sobic007G017500 Sobic007G017500 Sobic001G031700--Sobic007G017500 Sobic006G075400 Sobic006G075400 Sobic001G031700--Sobic006G075400 Sobic001G295200 Sobic001G295200 Sobic001G031700--Sobic001G295200 Sobic007G058400 Sobic007G058400 Sobic001G031700--Sobic007G058400 Sobic003G432700 Sobic003G432700 Sobic001G031700--Sobic003G432700 Sobic001G031700--Sobic010G221300 Sobic004G294400 Sobic004G294400 Sobic001G031700--Sobic004G294400 Sobic001G031700--Sobic001G313600 Sobic001G304100--Sobic009G188000 Sobic001G238400 Sobic001G238400 Sobic001G304100--Sobic001G238400 Sobic001G302600 Sobic001G302600 Sobic001G304100--Sobic001G302600 Sobic002G213600 Sobic002G213600 Sobic001G304100--Sobic002G213600 Sobic001G304100--Sobic003G084400 Sobic001G304100--Sobic001G313600 Sobic005G107900 Sobic005G107900 Sobic001G304100--Sobic005G107900 Sobic003G417200 Sobic003G417200 Sobic001G304100--Sobic003G417200 Sobic006G234800 Sobic006G234800 Sobic001G304100--Sobic006G234800 Sobic009G188000--Sobic001G313600 Sobic009G188000--Sobic001G304100 Sobic009G188000--Sobic005G107900 Sobic001G502400 Sobic001G502400 Sobic009G188000--Sobic001G502400 Sobic009G188000--Sobic001G238400 Sobic006G235100 Sobic006G235100 Sobic009G188000--Sobic006G235100 Sobic009G188000--Sobic003G084400 Sobic008G009400 Sobic008G009400 Sobic009G188000--Sobic008G009400 Sobic009G188000--Sobic001G295200 Sobic002G393400 Sobic002G393400 Sobic002G251900--Sobic002G393400 Sobic003G393900 Sobic003G393900 Sobic002G251900--Sobic003G393900 Sobic009G181800 Sobic009G181800 Sobic002G251900--Sobic009G181800 Sobic002G251900--Sobic002G387900 Sobic005G011300 Sobic005G011300 Sobic002G251900--Sobic005G011300 Sobic001G459800 Sobic001G459800 Sobic002G251900--Sobic001G459800 Sobic004G306300 Sobic004G306300 Sobic002G251900--Sobic004G306300 Sobic010G204500 Sobic010G204500 Sobic002G251900--Sobic010G204500 Sobic004G171400 Sobic004G171400 Sobic002G251900--Sobic004G171400 Sobic001G481000--Sobic001G304100 Sobic001G310300 Sobic001G310300 Sobic001G481000--Sobic001G310300 Sobic010G184800 Sobic010G184800 Sobic001G481000--Sobic010G184800 Sobic001G481000--Sobic004G203700 Sobic001G481000--Sobic009G188000 Sobic001G481000--Sobic003G027400 Sobic003G321200 Sobic003G321200 Sobic001G481000--Sobic003G321200 Sobic001G481000--Sobic002G213600 Sobic001G481000--Sobic003G160700 Sobic001G313600--Sobic005G107900 Sobic001G313600--Sobic001G502400 Sobic001G313600--Sobic009G188000 Sobic001G313600--Sobic006G235100 Sobic001G313600--Sobic003G432700 Sobic001G313600--Sobic005G011300 Sobic001G313600--Sobic006G075400 Sobic001G313600--Sobic001G304100 Sobic001G313600--Sobic009G184000
Octagon: transcription factors


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