Gene annotation
Transcriptome id Sobic.002G290500.3,Sobic.002G290500.2,Sobic.002G290500.1
Synonym ATPUB44, PUB44, SAUL1
Functional annotation armadillo/beta-catenin repeat protein-related, putative, expressed
UniProt A0A1B6QE09 , A0A1B6QE17 , A0A1W0W6E8
Pfam PF04564
Panther DB PTHR22849 PTHR22849:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016567; protein ubiquitination GO:0004842ubiquitin-protein transferase activity


Orthologs (automatic annotation)
TAIR AT1G20780 : senescence-associated E3 ubiquitin ligase 1
RAP-DB (Rice) LOC_Os12g17880.1 : armadillo/beta-catenin repeat protein-related, putative, expressed
MaizeGDB (Corn) Zm00025a047954 , Zm00025a047953
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G117600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@WRKY39, expressed -
2 Sobic.002G419500 HAD superfamily phosphatase, putative, expressed -
3 Sobic.008G111500 membrane associated DUF588 domain containing protein, putative, expressed -
4 Sobic.008G082200 osFTL7 FT-Like7 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
5 Sobic.002G338250 - -
6 Sobic.001G365100 lipase, putative, expressed -
7 Sobic.010G259500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
8 Sobic.003G191500 protein transport protein Sec61 subunit beta, putative, expressed K09481: SEC61B, protein transport protein SEC61 subunit beta
9 Sobic.001G447100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ATP8, putative, expressed -
10 Sobic.002G393600 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.005G103800 miro, putative, expressed K07953: GTP-binding protein SAR1
12 Sobic.001G100600 expressed protein -
13 Sobic.007G074200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- -
14 Sobic.005G011200 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.003G041200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.008G187700 expressed protein -
17 Sobic.003G349700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS1-15 - C2H2 zinc finger protein, expressed -
18 Sobic.007G039600 aquaporin protein, putative, expressed K09874: aquaporin NIP
19 Sobic.003G437200 sulfotransferase domain containing protein, expressed -
20 Sobic.006G136800 "shikimate hydroxycinnamoyl transferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase


Gene co-expression network
sample Sobic002G290500 Sobic002G290500 Sobic004G117600 Sobic004G117600 Sobic002G290500--Sobic004G117600 Sobic002G419500 Sobic002G419500 Sobic002G290500--Sobic002G419500 Sobic008G111500 Sobic008G111500 Sobic002G290500--Sobic008G111500 Sobic008G082200 Sobic008G082200 Sobic002G290500--Sobic008G082200 Sobic002G338250 Sobic002G338250 Sobic002G290500--Sobic002G338250 Sobic001G365100 Sobic001G365100 Sobic002G290500--Sobic001G365100 Sobic010G259500 Sobic010G259500 Sobic002G290500--Sobic010G259500 Sobic003G191500 Sobic003G191500 Sobic002G290500--Sobic003G191500 Sobic001G447100 Sobic001G447100 Sobic002G290500--Sobic001G447100 Sobic007G074200 Sobic007G074200 Sobic004G117600--Sobic007G074200 Sobic004G117600--Sobic002G338250 Sobic009G154200 Sobic009G154200 Sobic004G117600--Sobic009G154200 Sobic004G117600--Sobic008G111500 Sobic002G393600 Sobic002G393600 Sobic004G117600--Sobic002G393600 Sobic009G159400 Sobic009G159400 Sobic004G117600--Sobic009G159400 Sobic004G301300 Sobic004G301300 Sobic004G117600--Sobic004G301300 Sobic002G239200 Sobic002G239200 Sobic004G117600--Sobic002G239200 Sobic006G136800 Sobic006G136800 Sobic004G117600--Sobic006G136800 Sobic002G419500--Sobic002G290500 Sobic004G225800 Sobic004G225800 Sobic002G419500--Sobic004G225800 Sobic002G419500--Sobic007G074200 Sobic009G170800 Sobic009G170800 Sobic002G419500--Sobic009G170800 Sobic004G102900 Sobic004G102900 Sobic002G419500--Sobic004G102900 Sobic006G066600 Sobic006G066600 Sobic002G419500--Sobic006G066600 Sobic004G067900 Sobic004G067900 Sobic002G419500--Sobic004G067900 Sobic004G056201 Sobic004G056201 Sobic002G419500--Sobic004G056201 Sobic002G308400 Sobic002G308400 Sobic002G419500--Sobic002G308400 Sobic008G111500--Sobic007G074200 Sobic009G131400 Sobic009G131400 Sobic008G111500--Sobic009G131400 Sobic008G111500--Sobic001G447100 Sobic006G100200 Sobic006G100200 Sobic008G111500--Sobic006G100200 Sobic003G349700 Sobic003G349700 Sobic008G111500--Sobic003G349700 Sobic008G111500--Sobic004G117600 Sobic008G111500--Sobic002G338250 Sobic001G100600 Sobic001G100600 Sobic008G111500--Sobic001G100600 Sobic008G111500--Sobic002G393600 Sobic007G148000 Sobic007G148000 Sobic008G082200--Sobic007G148000 Sobic010G023000 Sobic010G023000 Sobic008G082200--Sobic010G023000 Sobic005G203100 Sobic005G203100 Sobic008G082200--Sobic005G203100 Sobic002G368500 Sobic002G368500 Sobic008G082200--Sobic002G368500 Sobic003G240600 Sobic003G240600 Sobic008G082200--Sobic003G240600 Sobic002G325100 Sobic002G325100 Sobic008G082200--Sobic002G325100 Sobic008G060050 Sobic008G060050 Sobic008G082200--Sobic008G060050 Sobic002G310500 Sobic002G310500 Sobic008G082200--Sobic002G310500 Sobic010G052700 Sobic010G052700 Sobic008G082200--Sobic010G052700 Sobic002G338250--Sobic007G074200 Sobic002G338250--Sobic004G117600 Sobic002G338250--Sobic009G154200 Sobic002G338250--Sobic002G393600 Sobic002G338250--Sobic008G111500 Sobic001G389900 Sobic001G389900 Sobic002G338250--Sobic001G389900 Sobic002G338250--Sobic003G349700 Sobic002G338250--Sobic001G447100 Sobic002G338250--Sobic006G136800 Sobic001G365100--Sobic010G259500 Sobic007G155100 Sobic007G155100 Sobic001G365100--Sobic007G155100 Sobic004G229800 Sobic004G229800 Sobic001G365100--Sobic004G229800 Sobic007G039600 Sobic007G039600 Sobic001G365100--Sobic007G039600 Sobic006G084600 Sobic006G084600 Sobic001G365100--Sobic006G084600 Sobic007G057000 Sobic007G057000 Sobic001G365100--Sobic007G057000 Sobic003G317100 Sobic003G317100 Sobic001G365100--Sobic003G317100 Sobic003G437200 Sobic003G437200 Sobic001G365100--Sobic003G437200 Sobic010G066700 Sobic010G066700 Sobic001G365100--Sobic010G066700 Sobic010G259500--Sobic001G365100 Sobic001G402200 Sobic001G402200 Sobic010G259500--Sobic001G402200 Sobic010G259500--Sobic007G039600 Sobic003G364000 Sobic003G364000 Sobic010G259500--Sobic003G364000 Sobic010G259500--Sobic007G155100 Sobic003G307801 Sobic003G307801 Sobic010G259500--Sobic003G307801 Sobic010G259500--Sobic010G066700 Sobic010G088700 Sobic010G088700 Sobic010G259500--Sobic010G088700 Sobic005G051500 Sobic005G051500 Sobic010G259500--Sobic005G051500 Sobic003G191500--Sobic003G317100 Sobic003G072300 Sobic003G072300 Sobic003G191500--Sobic003G072300 Sobic009G063900 Sobic009G063900 Sobic003G191500--Sobic009G063900 Sobic004G205100 Sobic004G205100 Sobic003G191500--Sobic004G205100 Sobic003G041200 Sobic003G041200 Sobic003G191500--Sobic003G041200 Sobic003G352300 Sobic003G352300 Sobic003G191500--Sobic003G352300 Sobic002G104900 Sobic002G104900 Sobic003G191500--Sobic002G104900 Sobic003G191500--Sobic006G084600 Sobic004G259600 Sobic004G259600 Sobic003G191500--Sobic004G259600 Sobic001G447100--Sobic003G349700 Sobic004G024200 Sobic004G024200 Sobic001G447100--Sobic004G024200 Sobic007G176600 Sobic007G176600 Sobic001G447100--Sobic007G176600 Sobic001G447100--Sobic008G111500 Sobic001G447100--Sobic007G074200 Sobic001G447100--Sobic001G100600 Sobic001G477300 Sobic001G477300 Sobic001G447100--Sobic001G477300 Sobic001G447100--Sobic009G131400 Sobic001G447100--Sobic003G041200
Octagon: transcription factors


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