Gene annotation
Transcriptome id Sobic.008G187700.1
Synonym Sb08g022870
Functional annotation expressed protein
UniProt A0A1Z5R7N5
Pfam -
Panther DB PTHR34061 PTHR34061:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g47210.1 : expressed protein
MaizeGDB (Corn) Zm00025a004845
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G125100 ubiquitin family protein, putative, expressed -
2 Sobic.004G227800 CBS domain-containing protein, putative, expressed -
3 Sobic.003G255500 expressed protein -
4 Sobic.001G063200 VQ domain containing protein, putative, expressed -
5 Sobic.001G161500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA12 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
6 Sobic.003G184100 auxin-induced protein 5NG4, putative, expressed -
7 Sobic.001G503100 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
8 Sobic.002G375400 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
9 Sobic.002G336700 nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
10 Sobic.010G110800 plastocyanin-like domain containing protein, putative, expressed -
11 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
12 Sobic.010G063000 - -
13 Sobic.001G333400 SCP-like extracellular protein, expressed -
14 Sobic.003G157600 expressed protein -
15 Sobic.003G255200 expressed protein -
16 Sobic.002G233100 expressed protein -
17 Sobic.002G001700 ZOS7-01 - C2H2 zinc finger protein, expressed -
18 Sobic.003G404600 regulatory protein, putative, expressed -
19 Sobic.010G185000 VQ domain containing protein, putative, expressed -
20 Sobic.004G349125 - -


Gene co-expression network
sample Sobic008G187700 Sobic008G187700 Sobic006G125100 Sobic006G125100 Sobic008G187700--Sobic006G125100 Sobic004G227800 Sobic004G227800 Sobic008G187700--Sobic004G227800 Sobic003G255500 Sobic003G255500 Sobic008G187700--Sobic003G255500 Sobic001G063200 Sobic001G063200 Sobic008G187700--Sobic001G063200 Sobic001G161500 Sobic001G161500 Sobic008G187700--Sobic001G161500 Sobic003G184100 Sobic003G184100 Sobic008G187700--Sobic003G184100 Sobic001G503100 Sobic001G503100 Sobic008G187700--Sobic001G503100 Sobic002G375400 Sobic002G375400 Sobic008G187700--Sobic002G375400 Sobic002G336700 Sobic002G336700 Sobic008G187700--Sobic002G336700 Sobic006G125100--Sobic001G503100 Sobic010G063000 Sobic010G063000 Sobic006G125100--Sobic010G063000 Sobic002G247600 Sobic002G247600 Sobic006G125100--Sobic002G247600 Sobic002G125700 Sobic002G125700 Sobic006G125100--Sobic002G125700 Sobic010G185000 Sobic010G185000 Sobic006G125100--Sobic010G185000 Sobic004G348400 Sobic004G348400 Sobic006G125100--Sobic004G348400 Sobic001G333400 Sobic001G333400 Sobic006G125100--Sobic001G333400 Sobic006G125100--Sobic003G255500 Sobic006G277600 Sobic006G277600 Sobic006G125100--Sobic006G277600 Sobic004G349125 Sobic004G349125 Sobic004G227800--Sobic004G349125 Sobic003G404600 Sobic003G404600 Sobic004G227800--Sobic003G404600 Sobic004G042000 Sobic004G042000 Sobic004G227800--Sobic004G042000 Sobic004G227800--Sobic001G161500 Sobic006G197100 Sobic006G197100 Sobic004G227800--Sobic006G197100 Sobic001G302600 Sobic001G302600 Sobic004G227800--Sobic001G302600 Sobic001G416200 Sobic001G416200 Sobic004G227800--Sobic001G416200 Sobic003G228600 Sobic003G228600 Sobic004G227800--Sobic003G228600 Sobic004G227800--Sobic006G125100 Sobic003G255500--Sobic001G503100 Sobic003G255200 Sobic003G255200 Sobic003G255500--Sobic003G255200 Sobic006G199800 Sobic006G199800 Sobic003G255500--Sobic006G199800 Sobic001G449600 Sobic001G449600 Sobic003G255500--Sobic001G449600 Sobic006G044100 Sobic006G044100 Sobic003G255500--Sobic006G044100 Sobic009G187200 Sobic009G187200 Sobic003G255500--Sobic009G187200 Sobic004G107700 Sobic004G107700 Sobic003G255500--Sobic004G107700 Sobic003G255500--Sobic004G348400 Sobic003G255500--Sobic001G161500 Sobic001G063200--Sobic001G416200 Sobic001G063200--Sobic001G161500 Sobic001G063200--Sobic004G349125 Sobic001G063200--Sobic010G063000 Sobic001G063200--Sobic004G042000 Sobic009G035300 Sobic009G035300 Sobic001G063200--Sobic009G035300 Sobic003G079400 Sobic003G079400 Sobic001G063200--Sobic003G079400 Sobic001G264000 Sobic001G264000 Sobic001G063200--Sobic001G264000 Sobic001G063200--Sobic006G125100 Sobic001G161500--Sobic001G416200 Sobic001G161500--Sobic004G349125 Sobic001G161500--Sobic001G302600 Sobic004G318700 Sobic004G318700 Sobic001G161500--Sobic004G318700 Sobic001G304100 Sobic001G304100 Sobic001G161500--Sobic001G304100 Sobic001G161500--Sobic004G042000 Sobic001G161500--Sobic009G035300 Sobic002G213600 Sobic002G213600 Sobic001G161500--Sobic002G213600 Sobic001G161500--Sobic006G197100 Sobic003G157600 Sobic003G157600 Sobic003G184100--Sobic003G157600 Sobic004G202400 Sobic004G202400 Sobic003G184100--Sobic004G202400 Sobic003G184100--Sobic006G044100 Sobic003G184100--Sobic006G197100 Sobic003G184100--Sobic001G416200 Sobic004G046200 Sobic004G046200 Sobic003G184100--Sobic004G046200 Sobic003G184100--Sobic004G042000 Sobic003G184100--Sobic004G349125 Sobic001G481400 Sobic001G481400 Sobic003G184100--Sobic001G481400 Sobic001G503100--Sobic002G125700 Sobic001G503100--Sobic006G277600 Sobic003G352300 Sobic003G352300 Sobic001G503100--Sobic003G352300 Sobic001G503100--Sobic006G125100 Sobic010G052700 Sobic010G052700 Sobic001G503100--Sobic010G052700 Sobic001G503100--Sobic004G107700 Sobic001G503100--Sobic003G255200 Sobic002G004900 Sobic002G004900 Sobic001G503100--Sobic002G004900 Sobic001G503100--Sobic003G255500 Sobic004G176600 Sobic004G176600 Sobic002G375400--Sobic004G176600 Sobic002G375400--Sobic004G107700 Sobic002G375400--Sobic010G185000 Sobic005G206601 Sobic005G206601 Sobic002G375400--Sobic005G206601 Sobic003G437200 Sobic003G437200 Sobic002G375400--Sobic003G437200 Sobic009G072900 Sobic009G072900 Sobic002G375400--Sobic009G072900 Sobic003G417800 Sobic003G417800 Sobic002G375400--Sobic003G417800 Sobic001G403000 Sobic001G403000 Sobic002G375400--Sobic001G403000 Sobic002G375400--Sobic004G348400 Sobic003G007600 Sobic003G007600 Sobic002G336700--Sobic003G007600 Sobic006G103000 Sobic006G103000 Sobic002G336700--Sobic006G103000 Sobic002G336700--Sobic010G185000 Sobic005G011200 Sobic005G011200 Sobic002G336700--Sobic005G011200 Sobic006G157900 Sobic006G157900 Sobic002G336700--Sobic006G157900 Sobic002G336700--Sobic001G333400 Sobic001G231700 Sobic001G231700 Sobic002G336700--Sobic001G231700 Sobic001G402200 Sobic001G402200 Sobic002G336700--Sobic001G402200 Sobic006G268800 Sobic006G268800 Sobic002G336700--Sobic006G268800
Octagon: transcription factors


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