Gene annotation
Transcriptome id Sobic.002G335500.1
Synonym Sb02g036100
Functional annotation OsFBX255 - F-box domain containing protein, expressed
UniProt A0A1W0W6V7
Pfam -
Panther DB PTHR33207:SF1 PTHR33207
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g36910.2 : OsFBX254 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G078500 Leucine Rich Repeat family protein, expressed -
2 Sobic.001G081800 GASR3 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
3 Sobic.002G196500 linker histone H1 and H5 family protein, expressed -
4 Sobic.001G005800 - K10885: XRCC5, KU80, ATP-dependent DNA helicase 2 subunit 2
5 Sobic.009G002200 formin-like protein 1 precursor, putative, expressed -
6 Sobic.003G259300 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
7 Sobic.002G006100 phytosulfokine receptor precursor, putative, expressed -
8 Sobic.004G145300 OsFBD12 - F-box and FBD domain containing protein, expressed -
9 Sobic.001G465500 radical SAM enzyme, putative, expressed -
10 Sobic.001G171100 expressed protein -
11 Sobic.002G112000 protein binding protein, putative, expressed -
12 Sobic.006G200901 - -
13 Sobic.002G238800 mago nashi, putative, expressed K12877: protein mago nashi
14 Sobic.003G343200 outer membrane protein, OMP85 family protein, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
15 Sobic.002G343000 expressed protein -
16 Sobic.002G354800 zinc finger family protein, putative, expressed -
17 Sobic.001G157600 WD domain, G-beta repeat domain containing protein, expressed K10752: RBBP4, HAT2, CAF1, histone-binding protein RBBP4
18 Sobic.010G222800 expressed protein -
19 Sobic.004G014100 sialyltransferase family domain containing protein, expressed -
20 Sobic.001G468000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF677 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G335500 Sobic002G335500 Sobic004G078500 Sobic004G078500 Sobic002G335500--Sobic004G078500 Sobic001G081800 Sobic001G081800 Sobic002G335500--Sobic001G081800 Sobic002G196500 Sobic002G196500 Sobic002G335500--Sobic002G196500 Sobic001G005800 Sobic001G005800 Sobic002G335500--Sobic001G005800 Sobic009G002200 Sobic009G002200 Sobic002G335500--Sobic009G002200 Sobic003G259300 Sobic003G259300 Sobic002G335500--Sobic003G259300 Sobic002G006100 Sobic002G006100 Sobic002G335500--Sobic002G006100 Sobic004G145300 Sobic004G145300 Sobic002G335500--Sobic004G145300 Sobic001G465500 Sobic001G465500 Sobic002G335500--Sobic001G465500 Sobic004G078500--Sobic002G335500 Sobic004G078500--Sobic002G006100 Sobic004G078500--Sobic009G002200 Sobic002G112000 Sobic002G112000 Sobic004G078500--Sobic002G112000 Sobic005G018050 Sobic005G018050 Sobic004G078500--Sobic005G018050 Sobic004G078500--Sobic001G081800 Sobic004G078500--Sobic003G259300 Sobic003G290400 Sobic003G290400 Sobic004G078500--Sobic003G290400 Sobic004G078500--Sobic001G465500 Sobic002G238800 Sobic002G238800 Sobic001G081800--Sobic002G238800 Sobic006G143300 Sobic006G143300 Sobic001G081800--Sobic006G143300 Sobic001G081800--Sobic002G335500 Sobic002G354800 Sobic002G354800 Sobic001G081800--Sobic002G354800 Sobic005G164800 Sobic005G164800 Sobic001G081800--Sobic005G164800 Sobic002G343000 Sobic002G343000 Sobic001G081800--Sobic002G343000 Sobic001G171100 Sobic001G171100 Sobic001G081800--Sobic001G171100 Sobic005G033700 Sobic005G033700 Sobic001G081800--Sobic005G033700 Sobic003G379900 Sobic003G379900 Sobic001G081800--Sobic003G379900 Sobic003G250100 Sobic003G250100 Sobic002G196500--Sobic003G250100 Sobic001G468000 Sobic001G468000 Sobic002G196500--Sobic001G468000 Sobic006G272800 Sobic006G272800 Sobic002G196500--Sobic006G272800 Sobic002G196500--Sobic002G112000 Sobic002G196500--Sobic002G335500 Sobic004G234600 Sobic004G234600 Sobic002G196500--Sobic004G234600 Sobic007G201900 Sobic007G201900 Sobic002G196500--Sobic007G201900 Sobic002G196500--Sobic001G171100 Sobic003G091200 Sobic003G091200 Sobic002G196500--Sobic003G091200 Sobic002G253900 Sobic002G253900 Sobic001G005800--Sobic002G253900 Sobic008G045800 Sobic008G045800 Sobic001G005800--Sobic008G045800 Sobic002G056000 Sobic002G056000 Sobic001G005800--Sobic002G056000 Sobic001G005800--Sobic002G335500 Sobic009G148000 Sobic009G148000 Sobic001G005800--Sobic009G148000 Sobic006G200901 Sobic006G200901 Sobic001G005800--Sobic006G200901 Sobic006G106200 Sobic006G106200 Sobic001G005800--Sobic006G106200 Sobic004G014100 Sobic004G014100 Sobic001G005800--Sobic004G014100 Sobic001G005800--Sobic002G343000 Sobic007G050800 Sobic007G050800 Sobic009G002200--Sobic007G050800 Sobic009G002200--Sobic003G290400 Sobic004G282601 Sobic004G282601 Sobic009G002200--Sobic004G282601 Sobic006G135800 Sobic006G135800 Sobic009G002200--Sobic006G135800 Sobic005G036200 Sobic005G036200 Sobic009G002200--Sobic005G036200 Sobic005G153000 Sobic005G153000 Sobic009G002200--Sobic005G153000 Sobic001G375800 Sobic001G375800 Sobic009G002200--Sobic001G375800 Sobic009G002200--Sobic004G078500 Sobic010G037901 Sobic010G037901 Sobic009G002200--Sobic010G037901 Sobic001G425700 Sobic001G425700 Sobic003G259300--Sobic001G425700 Sobic009G225500 Sobic009G225500 Sobic003G259300--Sobic009G225500 Sobic003G259300--Sobic002G006100 Sobic009G127800 Sobic009G127800 Sobic003G259300--Sobic009G127800 Sobic003G259300--Sobic006G272800 Sobic003G259300--Sobic005G153000 Sobic001G054700 Sobic001G054700 Sobic003G259300--Sobic001G054700 Sobic004G234500 Sobic004G234500 Sobic003G259300--Sobic004G234500 Sobic003G226700 Sobic003G226700 Sobic003G259300--Sobic003G226700 Sobic002G027600 Sobic002G027600 Sobic002G006100--Sobic002G027600 Sobic002G006100--Sobic003G259300 Sobic002G006100--Sobic006G272800 Sobic003G351900 Sobic003G351900 Sobic002G006100--Sobic003G351900 Sobic002G006100--Sobic001G425700 Sobic003G298900 Sobic003G298900 Sobic002G006100--Sobic003G298900 Sobic002G284100 Sobic002G284100 Sobic002G006100--Sobic002G284100 Sobic002G006100--Sobic004G078500 Sobic002G006100--Sobic009G225500 Sobic001G123100 Sobic001G123100 Sobic004G145300--Sobic001G123100 Sobic001G369800 Sobic001G369800 Sobic004G145300--Sobic001G369800 Sobic001G123300 Sobic001G123300 Sobic004G145300--Sobic001G123300 Sobic003G224700 Sobic003G224700 Sobic004G145300--Sobic003G224700 Sobic004G145300--Sobic002G284100 Sobic004G145300--Sobic002G335500 Sobic004G145300--Sobic002G006100 Sobic004G145300--Sobic001G171100 Sobic004G145300--Sobic006G200901 Sobic008G078000 Sobic008G078000 Sobic001G465500--Sobic008G078000 Sobic001G465500--Sobic002G335500 Sobic001G465500--Sobic004G078500 Sobic003G028400 Sobic003G028400 Sobic001G465500--Sobic003G028400 Sobic002G208400 Sobic002G208400 Sobic001G465500--Sobic002G208400 Sobic004G030400 Sobic004G030400 Sobic001G465500--Sobic004G030400 Sobic003G331000 Sobic003G331000 Sobic001G465500--Sobic003G331000 Sobic003G129300 Sobic003G129300 Sobic001G465500--Sobic003G129300 Sobic001G436300 Sobic001G436300 Sobic001G465500--Sobic001G436300
Octagon: transcription factors


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