Gene annotation
Transcriptome id Sobic.004G344500.1
Synonym KIS, Sb04g037170, TFCA
Functional annotation tubulin-specific chaperone A, putative, expressed
UniProt C5XVW0
Pfam PF02970
Panther DB PTHR21500 PTHR21500:SF0
NCBI CDD KOG3470; Beta-tubulin folding cofactor A
KEGG Orthology K17292; tubulin-specific chaperone A
Gene Ontology GO:0015631; tubulin binding GO:0007021tubulin complex assembly


Orthologs (automatic annotation)
TAIR AT2G30410 : tubulin folding cofactor A (KIESEL)
RAP-DB (Rice) LOC_Os02g57150.1 : tubulin-specific chaperone A, putative, expressed
MaizeGDB (Corn) Zm00025a022602
Brachypodium KQK09705 , KQK09706
Barley HORVU5Hr1G007960.1 , HORVU5Hr1G007960.2
Wheat TraesCS6A02G389600 , TraesCS5B02G028900 , TraesCS5D02G038700 , TraesCS5A02G030500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G418100 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
2 Sobic.003G122200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
3 Sobic.002G128800 fiber protein Fb34, putative, expressed -
4 Sobic.006G200000 RNA recognition motif, putative, expressed -
5 Sobic.003G443300 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
6 Sobic.003G096000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
7 Sobic.003G219800 transferase family protein, putative, expressed -
8 Sobic.001G304400 expressed protein -
9 Sobic.001G347901 - -
10 Sobic.010G265900 novel plant SNARE 11, putative, expressed K08494: novel plant SNARE
11 Sobic.009G181800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 9484480)@cytochrome P450, putative, expressed K09754: CYP98A, 5-O-(4-coumaroyl)-D-quinate 3'-monooxygenase
12 Sobic.001G475500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
13 Sobic.005G080900 expressed protein -
14 Sobic.003G034600 CAMK_CAMK_like_Aur_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
15 Sobic.007G150800 expressed protein -
16 Sobic.002G179300 60S ribosomal protein L35a-3, putative, expressed K02917: RP-L35Ae, large subunit ribosomal protein L35Ae
17 Sobic.003G011100 reticulon domain containing protein, putative, expressed -
18 Sobic.001G111000 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
19 Sobic.005G112800 erythronate-4-phosphate dehydrogenase, putative, expressed K01251: E3.3.1.1, adenosylhomocysteinase
20 Sobic.005G113300 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase


Gene co-expression network
sample Sobic004G344500 Sobic004G344500 Sobic001G418100 Sobic001G418100 Sobic004G344500--Sobic001G418100 Sobic003G122200 Sobic003G122200 Sobic004G344500--Sobic003G122200 Sobic002G128800 Sobic002G128800 Sobic004G344500--Sobic002G128800 Sobic006G200000 Sobic006G200000 Sobic004G344500--Sobic006G200000 Sobic003G443300 Sobic003G443300 Sobic004G344500--Sobic003G443300 Sobic003G096000 Sobic003G096000 Sobic004G344500--Sobic003G096000 Sobic003G219800 Sobic003G219800 Sobic004G344500--Sobic003G219800 Sobic001G304400 Sobic001G304400 Sobic004G344500--Sobic001G304400 Sobic001G347901 Sobic001G347901 Sobic004G344500--Sobic001G347901 Sobic001G418100--Sobic003G219800 Sobic005G112800 Sobic005G112800 Sobic001G418100--Sobic005G112800 Sobic002G396400 Sobic002G396400 Sobic001G418100--Sobic002G396400 Sobic009G181800 Sobic009G181800 Sobic001G418100--Sobic009G181800 Sobic002G154600 Sobic002G154600 Sobic001G418100--Sobic002G154600 Sobic001G514200 Sobic001G514200 Sobic001G418100--Sobic001G514200 Sobic001G418100--Sobic002G128800 Sobic001G475500 Sobic001G475500 Sobic001G418100--Sobic001G475500 Sobic008G055100 Sobic008G055100 Sobic001G418100--Sobic008G055100 Sobic003G122200--Sobic001G475500 Sobic003G122200--Sobic001G418100 Sobic007G150800 Sobic007G150800 Sobic003G122200--Sobic007G150800 Sobic003G122200--Sobic005G112800 Sobic003G034600 Sobic003G034600 Sobic003G122200--Sobic003G034600 Sobic010G264300 Sobic010G264300 Sobic003G122200--Sobic010G264300 Sobic001G038300 Sobic001G038300 Sobic003G122200--Sobic001G038300 Sobic004G055700 Sobic004G055700 Sobic003G122200--Sobic004G055700 Sobic001G040100 Sobic001G040100 Sobic003G122200--Sobic001G040100 Sobic002G252000 Sobic002G252000 Sobic002G128800--Sobic002G252000 Sobic002G128800--Sobic007G150800 Sobic002G128800--Sobic001G418100 Sobic002G128800--Sobic002G396400 Sobic002G128800--Sobic001G475500 Sobic010G052200 Sobic010G052200 Sobic002G128800--Sobic010G052200 Sobic006G156000 Sobic006G156000 Sobic002G128800--Sobic006G156000 Sobic002G128800--Sobic003G219800 Sobic002G128800--Sobic003G443300 Sobic006G120700 Sobic006G120700 Sobic006G200000--Sobic006G120700 Sobic005G080900 Sobic005G080900 Sobic006G200000--Sobic005G080900 Sobic003G396600 Sobic003G396600 Sobic006G200000--Sobic003G396600 Sobic010G265900 Sobic010G265900 Sobic006G200000--Sobic010G265900 Sobic006G200000--Sobic003G034600 Sobic010G115200 Sobic010G115200 Sobic006G200000--Sobic010G115200 Sobic006G083000 Sobic006G083000 Sobic006G200000--Sobic006G083000 Sobic003G300900 Sobic003G300900 Sobic006G200000--Sobic003G300900 Sobic001G410200 Sobic001G410200 Sobic006G200000--Sobic001G410200 Sobic003G443300--Sobic001G304400 Sobic001G418900 Sobic001G418900 Sobic003G443300--Sobic001G418900 Sobic001G483100 Sobic001G483100 Sobic003G443300--Sobic001G483100 Sobic001G085400 Sobic001G085400 Sobic003G443300--Sobic001G085400 Sobic006G216600 Sobic006G216600 Sobic003G443300--Sobic006G216600 Sobic003G443300--Sobic006G156000 Sobic009G212200 Sobic009G212200 Sobic003G443300--Sobic009G212200 Sobic003G249700 Sobic003G249700 Sobic003G443300--Sobic003G249700 Sobic003G443300--Sobic003G219800 Sobic004G056400 Sobic004G056400 Sobic003G096000--Sobic004G056400 Sobic010G089500 Sobic010G089500 Sobic003G096000--Sobic010G089500 Sobic001G350600 Sobic001G350600 Sobic003G096000--Sobic001G350600 Sobic010G101600 Sobic010G101600 Sobic003G096000--Sobic010G101600 Sobic002G356400 Sobic002G356400 Sobic003G096000--Sobic002G356400 Sobic001G030300 Sobic001G030300 Sobic003G096000--Sobic001G030300 Sobic002G180300 Sobic002G180300 Sobic003G096000--Sobic002G180300 Sobic006G013000 Sobic006G013000 Sobic003G096000--Sobic006G013000 Sobic001G047800 Sobic001G047800 Sobic003G096000--Sobic001G047800 Sobic003G219800--Sobic001G418100 Sobic003G219800--Sobic009G181800 Sobic001G444800 Sobic001G444800 Sobic003G219800--Sobic001G444800 Sobic003G219800--Sobic006G156000 Sobic003G219800--Sobic003G443300 Sobic003G219800--Sobic001G040100 Sobic003G219800--Sobic005G112800 Sobic005G113300 Sobic005G113300 Sobic003G219800--Sobic005G113300 Sobic009G238900 Sobic009G238900 Sobic003G219800--Sobic009G238900 Sobic001G304400--Sobic003G443300 Sobic001G432000 Sobic001G432000 Sobic001G304400--Sobic001G432000 Sobic001G286200 Sobic001G286200 Sobic001G304400--Sobic001G286200 Sobic001G304400--Sobic003G249700 Sobic001G304400--Sobic009G212200 Sobic007G019400 Sobic007G019400 Sobic001G304400--Sobic007G019400 Sobic002G304900 Sobic002G304900 Sobic001G304400--Sobic002G304900 Sobic003G150000 Sobic003G150000 Sobic001G304400--Sobic003G150000 Sobic009G062000 Sobic009G062000 Sobic001G304400--Sobic009G062000 Sobic004G342400 Sobic004G342400 Sobic001G347901--Sobic004G342400 Sobic002G308300 Sobic002G308300 Sobic001G347901--Sobic002G308300 Sobic009G016500 Sobic009G016500 Sobic001G347901--Sobic009G016500 Sobic009G179100 Sobic009G179100 Sobic001G347901--Sobic009G179100 Sobic001G370700 Sobic001G370700 Sobic001G347901--Sobic001G370700 Sobic009G233400 Sobic009G233400 Sobic001G347901--Sobic009G233400 Sobic002G415500 Sobic002G415500 Sobic001G347901--Sobic002G415500 Sobic009G173500 Sobic009G173500 Sobic001G347901--Sobic009G173500 Sobic001G334300 Sobic001G334300 Sobic001G347901--Sobic001G334300
Octagon: transcription factors


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