Gene annotation
Transcriptome id Sobic.009G182300.1
Synonym
Functional annotation -
UniProt A0A1B6P9C8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G007600 GTPase-activating protein, putative, expressed K12493: ADP-ribosylation factor GTPase-activating protein 2/3
2 Sobic.004G138800 prefoldin subunit, putative, expressed K09548: prefoldin subunit 1
3 Sobic.001G505500 ankyrin repeat domain containing protein, expressed -
4 Sobic.001G418900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.003G443300 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
6 Sobic.005G017300 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
7 Sobic.010G210000 ubiquitin family protein, putative, expressed K12158: ubiquitin-like protein Nedd8
8 Sobic.004G344500 tubulin-specific chaperone A, putative, expressed K17292: tubulin-specific chaperone A
9 Sobic.003G127700 split hand/foot malformation type 1, putative, expressed K10881: SHFM1, DSS1, 26 proteasome complex subunit DSS1
10 Sobic.002G280200 Skp1 family, dimerisation domain containing protein, expressed K03094: SKP1, S-phase kinase-associated protein 1
11 Sobic.002G361700 expressed protein -
12 Sobic.006G156000 ferredoxin-thioredoxin reductase, variable chain, putative, expressed -
13 Sobic.009G033000 expressed protein -
14 Sobic.003G011100 reticulon domain containing protein, putative, expressed -
15 Sobic.008G149450 - -
16 Sobic.010G213400 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
17 Sobic.007G183800 ankyrin repeat-containing protein, putative, expressed -
18 Sobic.003G219800 transferase family protein, putative, expressed -
19 Sobic.001G096100 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
20 Sobic.007G092100 ADP-ribosylation factor, putative, expressed K07942: ADP-ribosylation factor-like protein 1


Gene co-expression network
sample Sobic009G182300 Sobic009G182300 Sobic001G007600 Sobic001G007600 Sobic009G182300--Sobic001G007600 Sobic004G138800 Sobic004G138800 Sobic009G182300--Sobic004G138800 Sobic001G505500 Sobic001G505500 Sobic009G182300--Sobic001G505500 Sobic001G418900 Sobic001G418900 Sobic009G182300--Sobic001G418900 Sobic003G443300 Sobic003G443300 Sobic009G182300--Sobic003G443300 Sobic005G017300 Sobic005G017300 Sobic009G182300--Sobic005G017300 Sobic010G210000 Sobic010G210000 Sobic009G182300--Sobic010G210000 Sobic004G344500 Sobic004G344500 Sobic009G182300--Sobic004G344500 Sobic003G127700 Sobic003G127700 Sobic009G182300--Sobic003G127700 Sobic001G007600--Sobic004G138800 Sobic009G067000 Sobic009G067000 Sobic001G007600--Sobic009G067000 Sobic001G007600--Sobic001G418900 Sobic001G007600--Sobic003G443300 Sobic001G007600--Sobic001G505500 Sobic003G368500 Sobic003G368500 Sobic001G007600--Sobic003G368500 Sobic006G252200 Sobic006G252200 Sobic001G007600--Sobic006G252200 Sobic001G007600--Sobic009G182300 Sobic007G076300 Sobic007G076300 Sobic001G007600--Sobic007G076300 Sobic004G138800--Sobic001G418900 Sobic004G224900 Sobic004G224900 Sobic004G138800--Sobic004G224900 Sobic004G138800--Sobic007G076300 Sobic004G138800--Sobic001G505500 Sobic009G119900 Sobic009G119900 Sobic004G138800--Sobic009G119900 Sobic001G096100 Sobic001G096100 Sobic004G138800--Sobic001G096100 Sobic003G330500 Sobic003G330500 Sobic004G138800--Sobic003G330500 Sobic004G138800--Sobic001G007600 Sobic004G138800--Sobic006G252200 Sobic001G505500--Sobic004G138800 Sobic001G505500--Sobic001G418900 Sobic007G115100 Sobic007G115100 Sobic001G505500--Sobic007G115100 Sobic001G505500--Sobic007G076300 Sobic007G092100 Sobic007G092100 Sobic001G505500--Sobic007G092100 Sobic001G334300 Sobic001G334300 Sobic001G505500--Sobic001G334300 Sobic001G018800 Sobic001G018800 Sobic001G505500--Sobic001G018800 Sobic009G227400 Sobic009G227400 Sobic001G505500--Sobic009G227400 Sobic001G513500 Sobic001G513500 Sobic001G505500--Sobic001G513500 Sobic001G418900--Sobic007G115100 Sobic001G418900--Sobic003G443300 Sobic001G418900--Sobic004G138800 Sobic004G310300 Sobic004G310300 Sobic001G418900--Sobic004G310300 Sobic002G257300 Sobic002G257300 Sobic001G418900--Sobic002G257300 Sobic001G418900--Sobic009G119900 Sobic003G155400 Sobic003G155400 Sobic001G418900--Sobic003G155400 Sobic005G188100 Sobic005G188100 Sobic001G418900--Sobic005G188100 Sobic005G110800 Sobic005G110800 Sobic001G418900--Sobic005G110800 Sobic001G304400 Sobic001G304400 Sobic003G443300--Sobic001G304400 Sobic003G443300--Sobic001G418900 Sobic001G483100 Sobic001G483100 Sobic003G443300--Sobic001G483100 Sobic001G085400 Sobic001G085400 Sobic003G443300--Sobic001G085400 Sobic006G216600 Sobic006G216600 Sobic003G443300--Sobic006G216600 Sobic006G156000 Sobic006G156000 Sobic003G443300--Sobic006G156000 Sobic009G212200 Sobic009G212200 Sobic003G443300--Sobic009G212200 Sobic003G249700 Sobic003G249700 Sobic003G443300--Sobic003G249700 Sobic003G219800 Sobic003G219800 Sobic003G443300--Sobic003G219800 Sobic005G017300--Sobic004G138800 Sobic005G017300--Sobic009G182300 Sobic005G017300--Sobic001G007600 Sobic005G017300--Sobic001G096100 Sobic002G309400 Sobic002G309400 Sobic005G017300--Sobic002G309400 Sobic002G060900 Sobic002G060900 Sobic005G017300--Sobic002G060900 Sobic003G290000 Sobic003G290000 Sobic005G017300--Sobic003G290000 Sobic005G017300--Sobic009G067000 Sobic005G017300--Sobic007G092100 Sobic003G018600 Sobic003G018600 Sobic010G210000--Sobic003G018600 Sobic002G376500 Sobic002G376500 Sobic010G210000--Sobic002G376500 Sobic006G115000 Sobic006G115000 Sobic010G210000--Sobic006G115000 Sobic003G362400 Sobic003G362400 Sobic010G210000--Sobic003G362400 Sobic009G012700 Sobic009G012700 Sobic010G210000--Sobic009G012700 Sobic009G050200 Sobic009G050200 Sobic010G210000--Sobic009G050200 Sobic003G073900 Sobic003G073900 Sobic010G210000--Sobic003G073900 Sobic010G210000--Sobic001G018800 Sobic004G062400 Sobic004G062400 Sobic010G210000--Sobic004G062400 Sobic001G418100 Sobic001G418100 Sobic004G344500--Sobic001G418100 Sobic003G122200 Sobic003G122200 Sobic004G344500--Sobic003G122200 Sobic002G128800 Sobic002G128800 Sobic004G344500--Sobic002G128800 Sobic006G200000 Sobic006G200000 Sobic004G344500--Sobic006G200000 Sobic004G344500--Sobic003G443300 Sobic003G096000 Sobic003G096000 Sobic004G344500--Sobic003G096000 Sobic004G344500--Sobic003G219800 Sobic004G344500--Sobic001G304400 Sobic001G347901 Sobic001G347901 Sobic004G344500--Sobic001G347901 Sobic002G378401 Sobic002G378401 Sobic003G127700--Sobic002G378401 Sobic002G116200 Sobic002G116200 Sobic003G127700--Sobic002G116200 Sobic003G367900 Sobic003G367900 Sobic003G127700--Sobic003G367900 Sobic003G127700--Sobic010G210000 Sobic007G068000 Sobic007G068000 Sobic003G127700--Sobic007G068000 Sobic009G258600 Sobic009G258600 Sobic003G127700--Sobic009G258600 Sobic010G008100 Sobic010G008100 Sobic003G127700--Sobic010G008100 Sobic002G280200 Sobic002G280200 Sobic003G127700--Sobic002G280200 Sobic003G127700--Sobic009G050200
Octagon: transcription factors


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