Gene annotation
Transcriptome id Sobic.009G033000.1
Synonym Sb09g002780
Functional annotation expressed protein
UniProt C5YZI8
Pfam -
Panther DB PTHR37264 PTHR37264:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G55125 : Ribosomal protein L31
RAP-DB (Rice) LOC_Os11g31650.2 : expressed protein
MaizeGDB (Corn) Zm00025a055311
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G130400 prefoldin, putative, expressed -
2 Sobic.004G138800 prefoldin subunit, putative, expressed K09548: prefoldin subunit 1
3 Sobic.006G216600 ribosomal protein L3, putative, expressed K02925: RP-L3e, large subunit ribosomal protein L3e
4 Sobic.004G107600 prefoldin subunit, putative, expressed K04798: pfdB, prefoldin beta subunit
5 Sobic.001G418900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.007G115100 hydrolase, NUDIX family, domain containing protein, expressed -
7 Sobic.001G018800 60S ribosomal protein L44, putative, expressed K02929: RP-L44e, large subunit ribosomal protein L44e
8 Sobic.007G092100 ADP-ribosylation factor, putative, expressed K07942: ADP-ribosylation factor-like protein 1
9 Sobic.009G191200 40S ribosomal protein S15, putative, expressed K02958: RP-S15e, small subunit ribosomal protein S15e
10 Sobic.001G513500 ribosomal protein L7Ae, putative, expressed K12845: SNU13, U4/U6 small nuclear ribonucleoprotein SNU13
11 Sobic.004G066800 peptidase, T1 family, putative, expressed K02735: 20S proteasome subunit beta 3
12 Sobic.001G331900 expressed protein -
13 Sobic.003G442400 eukaryotic translation initiation factor, putative, expressed K03259: translation initiation factor 4E
14 Sobic.003G160900 40S ribosomal protein S4, putative, expressed K02987: RP-S4e, small subunit ribosomal protein S4e
15 Sobic.001G505500 ankyrin repeat domain containing protein, expressed -
16 Sobic.003G443300 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
17 Sobic.008G132700 ATP-grasp domain containing protein, expressed K01648: ATP citrate (pro-S)-lyase
18 Sobic.010G023900 S10/S20 domain containing ribosomal protein, putative, expressed K02969: RP-S20e, small subunit ribosomal protein S20e
19 Sobic.005G027300 ribosomal protein L24, putative, expressed K02895: RP-L24, MRPL24, large subunit ribosomal protein L24
20 Sobic.002G413400 ribosomal protein, putative, expressed K14842: ribosome biogenesis protein NSA2


Gene co-expression network
sample Sobic009G033000 Sobic009G033000 Sobic008G130400 Sobic008G130400 Sobic009G033000--Sobic008G130400 Sobic004G138800 Sobic004G138800 Sobic009G033000--Sobic004G138800 Sobic006G216600 Sobic006G216600 Sobic009G033000--Sobic006G216600 Sobic004G107600 Sobic004G107600 Sobic009G033000--Sobic004G107600 Sobic001G418900 Sobic001G418900 Sobic009G033000--Sobic001G418900 Sobic007G115100 Sobic007G115100 Sobic009G033000--Sobic007G115100 Sobic001G018800 Sobic001G018800 Sobic009G033000--Sobic001G018800 Sobic007G092100 Sobic007G092100 Sobic009G033000--Sobic007G092100 Sobic009G191200 Sobic009G191200 Sobic009G033000--Sobic009G191200 Sobic002G263800 Sobic002G263800 Sobic008G130400--Sobic002G263800 Sobic009G232000 Sobic009G232000 Sobic008G130400--Sobic009G232000 Sobic008G132700 Sobic008G132700 Sobic008G130400--Sobic008G132700 Sobic001G513500 Sobic001G513500 Sobic008G130400--Sobic001G513500 Sobic008G130400--Sobic001G418900 Sobic001G483100 Sobic001G483100 Sobic008G130400--Sobic001G483100 Sobic004G310300 Sobic004G310300 Sobic008G130400--Sobic004G310300 Sobic006G138100 Sobic006G138100 Sobic008G130400--Sobic006G138100 Sobic004G224900 Sobic004G224900 Sobic008G130400--Sobic004G224900 Sobic004G138800--Sobic001G418900 Sobic004G138800--Sobic004G224900 Sobic007G076300 Sobic007G076300 Sobic004G138800--Sobic007G076300 Sobic001G505500 Sobic001G505500 Sobic004G138800--Sobic001G505500 Sobic009G119900 Sobic009G119900 Sobic004G138800--Sobic009G119900 Sobic001G096100 Sobic001G096100 Sobic004G138800--Sobic001G096100 Sobic003G330500 Sobic003G330500 Sobic004G138800--Sobic003G330500 Sobic001G007600 Sobic001G007600 Sobic004G138800--Sobic001G007600 Sobic006G252200 Sobic006G252200 Sobic004G138800--Sobic006G252200 Sobic001G085400 Sobic001G085400 Sobic006G216600--Sobic001G085400 Sobic003G387900 Sobic003G387900 Sobic006G216600--Sobic003G387900 Sobic002G304900 Sobic002G304900 Sobic006G216600--Sobic002G304900 Sobic001G057300 Sobic001G057300 Sobic006G216600--Sobic001G057300 Sobic002G049300 Sobic002G049300 Sobic006G216600--Sobic002G049300 Sobic009G144300 Sobic009G144300 Sobic006G216600--Sobic009G144300 Sobic002G115000 Sobic002G115000 Sobic006G216600--Sobic002G115000 Sobic002G047600 Sobic002G047600 Sobic006G216600--Sobic002G047600 Sobic003G363800 Sobic003G363800 Sobic006G216600--Sobic003G363800 Sobic001G331900 Sobic001G331900 Sobic004G107600--Sobic001G331900 Sobic003G362400 Sobic003G362400 Sobic004G107600--Sobic003G362400 Sobic001G377800 Sobic001G377800 Sobic004G107600--Sobic001G377800 Sobic010G182600 Sobic010G182600 Sobic004G107600--Sobic010G182600 Sobic005G092800 Sobic005G092800 Sobic004G107600--Sobic005G092800 Sobic005G157200 Sobic005G157200 Sobic004G107600--Sobic005G157200 Sobic002G078400 Sobic002G078400 Sobic004G107600--Sobic002G078400 Sobic003G321700 Sobic003G321700 Sobic004G107600--Sobic003G321700 Sobic001G445800 Sobic001G445800 Sobic004G107600--Sobic001G445800 Sobic001G418900--Sobic007G115100 Sobic003G443300 Sobic003G443300 Sobic001G418900--Sobic003G443300 Sobic001G418900--Sobic004G138800 Sobic001G418900--Sobic004G310300 Sobic002G257300 Sobic002G257300 Sobic001G418900--Sobic002G257300 Sobic001G418900--Sobic009G119900 Sobic003G155400 Sobic003G155400 Sobic001G418900--Sobic003G155400 Sobic005G188100 Sobic005G188100 Sobic001G418900--Sobic005G188100 Sobic005G110800 Sobic005G110800 Sobic001G418900--Sobic005G110800 Sobic007G115100--Sobic001G418900 Sobic004G269700 Sobic004G269700 Sobic007G115100--Sobic004G269700 Sobic007G115100--Sobic003G155400 Sobic007G115100--Sobic001G505500 Sobic010G153100 Sobic010G153100 Sobic007G115100--Sobic010G153100 Sobic001G342200 Sobic001G342200 Sobic007G115100--Sobic001G342200 Sobic010G023800 Sobic010G023800 Sobic007G115100--Sobic010G023800 Sobic010G154700 Sobic010G154700 Sobic007G115100--Sobic010G154700 Sobic007G115100--Sobic004G138800 Sobic001G340500 Sobic001G340500 Sobic001G018800--Sobic001G340500 Sobic006G137100 Sobic006G137100 Sobic001G018800--Sobic006G137100 Sobic006G213000 Sobic006G213000 Sobic001G018800--Sobic006G213000 Sobic009G227400 Sobic009G227400 Sobic001G018800--Sobic009G227400 Sobic003G018600 Sobic003G018600 Sobic001G018800--Sobic003G018600 Sobic009G166500 Sobic009G166500 Sobic001G018800--Sobic009G166500 Sobic001G011200 Sobic001G011200 Sobic001G018800--Sobic001G011200 Sobic009G242400 Sobic009G242400 Sobic001G018800--Sobic009G242400 Sobic010G023900 Sobic010G023900 Sobic001G018800--Sobic010G023900 Sobic004G066800 Sobic004G066800 Sobic007G092100--Sobic004G066800 Sobic007G092100--Sobic001G057300 Sobic007G092100--Sobic001G505500 Sobic001G035400 Sobic001G035400 Sobic007G092100--Sobic001G035400 Sobic007G092100--Sobic001G342200 Sobic007G092100--Sobic003G330500 Sobic007G092100--Sobic001G096100 Sobic007G092100--Sobic004G138800 Sobic007G092100--Sobic009G191200 Sobic009G233400 Sobic009G233400 Sobic009G191200--Sobic009G233400 Sobic008G135000 Sobic008G135000 Sobic009G191200--Sobic008G135000 Sobic001G334300 Sobic001G334300 Sobic009G191200--Sobic001G334300 Sobic001G058900 Sobic001G058900 Sobic009G191200--Sobic001G058900 Sobic009G191200--Sobic002G115000 Sobic009G191200--Sobic002G049300 Sobic003G280700 Sobic003G280700 Sobic009G191200--Sobic003G280700 Sobic009G191200--Sobic001G085400 Sobic009G191200--Sobic002G304900
Octagon: transcription factors


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