Gene annotation
Transcriptome id Sobic.001G260701.1
Synonym ALAAT2
Functional annotation - (PubMedID : 26976818)
UniProt A0A1Z5S7Z8
Pfam PF00155
Panther DB PTHR11751 PTHR11751:SF409
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009058; biosynthetic process


Orthologs (automatic annotation)
TAIR AT1G72330 : alanine aminotransferase 2
RAP-DB (Rice) LOC_Os10g25140.1 : aminotransferase, classes I and II, domain containing protein, expressed
MaizeGDB (Corn) Zm00025a017886
Brachypodium -
Barley -
Wheat TraesCS5A02G059300 , TraesCS5D02G070800 , TraesCS5B02G066600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G263700 expressed protein -
2 Sobic.001G304800 expressed protein -
3 Sobic.002G286700 lysM domain-containing GPI-anchored protein precursor, putative, expressed -
4 Sobic.006G105600 "domain confirmed by Pfam database, expression is supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA treatment"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
5 Sobic.004G233700 glycosyl hydrolase family 3 protein, putative, expressed -
6 Sobic.008G083500 expressed protein -
7 Sobic.003G179500 expressed protein K06676: BRRN1, BRN1, condensin complex subunit 2
8 Sobic.002G218600 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed -
9 Sobic.004G066900 protein kinase family protein, putative, expressed -
10 Sobic.009G208900 expressed protein -
11 Sobic.007G113300 BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed -
12 Sobic.003G412800 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
13 Sobic.001G116900 expressed protein -
14 Sobic.002G146601 - -
15 Sobic.002G296000 HEAT repeat family protein, putative, expressed -
16 Sobic.008G141200 DUF1336 domain containing protein, expressed -
17 Sobic.007G218100 transmembrane receptor, putative, expressed -
18 Sobic.005G144600 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
19 Sobic.001G261400 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
20 Sobic.006G124400 ATP binding protein, putative, expressed -


Gene co-expression network
sample Sobic001G260701 Sobic001G260701 Sobic004G263700 Sobic004G263700 Sobic001G260701--Sobic004G263700 Sobic001G304800 Sobic001G304800 Sobic001G260701--Sobic001G304800 Sobic002G286700 Sobic002G286700 Sobic001G260701--Sobic002G286700 Sobic006G105600 Sobic006G105600 Sobic001G260701--Sobic006G105600 Sobic004G233700 Sobic004G233700 Sobic001G260701--Sobic004G233700 Sobic008G083500 Sobic008G083500 Sobic001G260701--Sobic008G083500 Sobic003G179500 Sobic003G179500 Sobic001G260701--Sobic003G179500 Sobic002G218600 Sobic002G218600 Sobic001G260701--Sobic002G218600 Sobic004G066900 Sobic004G066900 Sobic001G260701--Sobic004G066900 Sobic004G263700--Sobic001G260701 Sobic001G261400 Sobic001G261400 Sobic004G263700--Sobic001G261400 Sobic004G263700--Sobic002G218600 Sobic004G263700--Sobic004G233700 Sobic004G263700--Sobic001G304800 Sobic007G113300 Sobic007G113300 Sobic004G263700--Sobic007G113300 Sobic002G230900 Sobic002G230900 Sobic004G263700--Sobic002G230900 Sobic006G073800 Sobic006G073800 Sobic004G263700--Sobic006G073800 Sobic004G029450 Sobic004G029450 Sobic004G263700--Sobic004G029450 Sobic002G296000 Sobic002G296000 Sobic001G304800--Sobic002G296000 Sobic001G304800--Sobic002G286700 Sobic001G304800--Sobic008G083500 Sobic009G101100 Sobic009G101100 Sobic001G304800--Sobic009G101100 Sobic001G304800--Sobic006G105600 Sobic007G218100 Sobic007G218100 Sobic001G304800--Sobic007G218100 Sobic003G246800 Sobic003G246800 Sobic001G304800--Sobic003G246800 Sobic009G146250 Sobic009G146250 Sobic001G304800--Sobic009G146250 Sobic006G124400 Sobic006G124400 Sobic001G304800--Sobic006G124400 Sobic008G190000 Sobic008G190000 Sobic002G286700--Sobic008G190000 Sobic002G286700--Sobic001G304800 Sobic002G286700--Sobic003G246800 Sobic002G286700--Sobic008G083500 Sobic002G286700--Sobic002G296000 Sobic002G286700--Sobic009G101100 Sobic001G461800 Sobic001G461800 Sobic002G286700--Sobic001G461800 Sobic002G286700--Sobic006G105600 Sobic003G032200 Sobic003G032200 Sobic002G286700--Sobic003G032200 Sobic005G091000 Sobic005G091000 Sobic006G105600--Sobic005G091000 Sobic001G267100 Sobic001G267100 Sobic006G105600--Sobic001G267100 Sobic006G105600--Sobic006G124400 Sobic006G105600--Sobic002G296000 Sobic009G137500 Sobic009G137500 Sobic006G105600--Sobic009G137500 Sobic002G394500 Sobic002G394500 Sobic006G105600--Sobic002G394500 Sobic006G105600--Sobic004G233700 Sobic006G105600--Sobic008G083500 Sobic006G105600--Sobic001G304800 Sobic009G208900 Sobic009G208900 Sobic004G233700--Sobic009G208900 Sobic004G233700--Sobic006G105600 Sobic005G025900 Sobic005G025900 Sobic004G233700--Sobic005G025900 Sobic003G420100 Sobic003G420100 Sobic004G233700--Sobic003G420100 Sobic002G142200 Sobic002G142200 Sobic004G233700--Sobic002G142200 Sobic005G144600 Sobic005G144600 Sobic004G233700--Sobic005G144600 Sobic004G233700--Sobic007G113300 Sobic007G168900 Sobic007G168900 Sobic004G233700--Sobic007G168900 Sobic004G233700--Sobic002G296000 Sobic008G083500--Sobic002G296000 Sobic003G420300 Sobic003G420300 Sobic008G083500--Sobic003G420300 Sobic010G024500 Sobic010G024500 Sobic008G083500--Sobic010G024500 Sobic008G083500--Sobic006G105600 Sobic008G083500--Sobic001G304800 Sobic008G083500--Sobic009G101100 Sobic008G083500--Sobic002G286700 Sobic003G292700 Sobic003G292700 Sobic008G083500--Sobic003G292700 Sobic001G054700 Sobic001G054700 Sobic008G083500--Sobic001G054700 Sobic003G183700 Sobic003G183700 Sobic003G179500--Sobic003G183700 Sobic010G103700 Sobic010G103700 Sobic003G179500--Sobic010G103700 Sobic010G105400 Sobic010G105400 Sobic003G179500--Sobic010G105400 Sobic003G179500--Sobic005G144600 Sobic010G147700 Sobic010G147700 Sobic003G179500--Sobic010G147700 Sobic009G087000 Sobic009G087000 Sobic003G179500--Sobic009G087000 Sobic005G110535 Sobic005G110535 Sobic003G179500--Sobic005G110535 Sobic006G116500 Sobic006G116500 Sobic003G179500--Sobic006G116500 Sobic004G047100 Sobic004G047100 Sobic003G179500--Sobic004G047100 Sobic002G218600--Sobic004G263700 Sobic002G218600--Sobic001G261400 Sobic002G218600--Sobic009G146250 Sobic002G218600--Sobic007G113300 Sobic002G218600--Sobic002G230900 Sobic006G120600 Sobic006G120600 Sobic002G218600--Sobic006G120600 Sobic002G218600--Sobic010G103700 Sobic002G218600--Sobic001G304800 Sobic002G218600--Sobic003G179500 Sobic003G247600 Sobic003G247600 Sobic004G066900--Sobic003G247600 Sobic003G135400 Sobic003G135400 Sobic004G066900--Sobic003G135400 Sobic004G066900--Sobic003G420100 Sobic008G141200 Sobic008G141200 Sobic004G066900--Sobic008G141200 Sobic004G066900--Sobic001G260701 Sobic005G047100 Sobic005G047100 Sobic004G066900--Sobic005G047100 Sobic001G382700 Sobic001G382700 Sobic004G066900--Sobic001G382700 Sobic010G216600 Sobic010G216600 Sobic004G066900--Sobic010G216600 Sobic009G242501 Sobic009G242501 Sobic004G066900--Sobic009G242501
Octagon: transcription factors


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