Gene annotation
Transcriptome id Sobic.002G062600.1
Synonym Sb02g005210
Functional annotation Leucine Rich Repeat family protein, expressed
UniProt C5XBV1
Pfam PF13855 PF00931
Panther DB PTHR23155 PTHR23155:SF528
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G14470 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os11g46200.1 : Leucine Rich Repeat family protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS4A02G491000 , TraesCS4A02G493400 , TraesCS7A02G004500 , TraesCSU02G103200 , TraesCS4A02G490500 , TraesCSU02G194100 , TraesCSU02G022300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G007000 Leucine Rich Repeat family protein, expressed -
2 Sobic.002G064600 expressed protein -
3 Sobic.007G111700 glutathione S-transferase, C-terminal domain containing protein, expressed -
4 Sobic.003G419600 disease resistance protein RGA2, putative, expressed -
5 Sobic.005G057000 Leucine Rich Repeat family protein, expressed -
6 Sobic.005G110600 glycosyl hydrolase, putative, expressed K01183: chitinase
7 Sobic.005G112000 P21-Rho-binding domain containing protein, putative, expressed -
8 Sobic.008G114000 expressed protein -
9 Sobic.006G062300 Leucine Rich Repeat family protein, expressed -
10 Sobic.001G402400 expressed protein -
11 Sobic.006G096500 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
12 Sobic.003G296500 leucine rich repeat family protein, putative, expressed -
13 Sobic.010G220300 glucan endo-1,3-beta-glucosidase 12 precursor, putative, expressed -
14 Sobic.005G130700 expressed protein -
15 Sobic.005G052500 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)
16 Sobic.003G269100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AWPM-19-like membrane family protein, putative, expressed -
17 Sobic.008G170400 expressed protein -
18 Sobic.007G008700 expressed protein -
19 Sobic.004G297950 - -
20 Sobic.010G276700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Sucrose synthase genes(PubMedID : 24456189)@sucrose synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose synthase, putative, expressed K00695: sucrose synthase


Gene co-expression network
sample Sobic002G062600 Sobic002G062600 Sobic010G007000 Sobic010G007000 Sobic002G062600--Sobic010G007000 Sobic002G064600 Sobic002G064600 Sobic002G062600--Sobic002G064600 Sobic007G111700 Sobic007G111700 Sobic002G062600--Sobic007G111700 Sobic003G419600 Sobic003G419600 Sobic002G062600--Sobic003G419600 Sobic005G057000 Sobic005G057000 Sobic002G062600--Sobic005G057000 Sobic005G110600 Sobic005G110600 Sobic002G062600--Sobic005G110600 Sobic005G112000 Sobic005G112000 Sobic002G062600--Sobic005G112000 Sobic008G114000 Sobic008G114000 Sobic002G062600--Sobic008G114000 Sobic006G062300 Sobic006G062300 Sobic002G062600--Sobic006G062300 Sobic010G007000--Sobic002G064600 Sobic010G007000--Sobic003G419600 Sobic010G007000--Sobic005G110600 Sobic008G170400 Sobic008G170400 Sobic010G007000--Sobic008G170400 Sobic010G007000--Sobic006G062300 Sobic003G296500 Sobic003G296500 Sobic010G007000--Sobic003G296500 Sobic010G007000--Sobic005G112000 Sobic001G402400 Sobic001G402400 Sobic010G007000--Sobic001G402400 Sobic010G007000--Sobic002G062600 Sobic002G064600--Sobic010G007000 Sobic002G064600--Sobic005G110600 Sobic002G064600--Sobic008G170400 Sobic002G064600--Sobic003G296500 Sobic002G064600--Sobic003G419600 Sobic002G064600--Sobic002G062600 Sobic003G006100 Sobic003G006100 Sobic002G064600--Sobic003G006100 Sobic002G064600--Sobic006G062300 Sobic005G130700 Sobic005G130700 Sobic002G064600--Sobic005G130700 Sobic007G111700--Sobic008G170400 Sobic002G016400 Sobic002G016400 Sobic007G111700--Sobic002G016400 Sobic005G098400 Sobic005G098400 Sobic007G111700--Sobic005G098400 Sobic007G050500 Sobic007G050500 Sobic007G111700--Sobic007G050500 Sobic005G025900 Sobic005G025900 Sobic007G111700--Sobic005G025900 Sobic001G345200 Sobic001G345200 Sobic007G111700--Sobic001G345200 Sobic002G034301 Sobic002G034301 Sobic007G111700--Sobic002G034301 Sobic007G202100 Sobic007G202100 Sobic007G111700--Sobic007G202100 Sobic007G111700--Sobic003G419600 Sobic003G419600--Sobic005G130700 Sobic003G419600--Sobic010G007000 Sobic003G419600--Sobic005G110600 Sobic003G419600--Sobic006G062300 Sobic001G037400 Sobic001G037400 Sobic003G419600--Sobic001G037400 Sobic003G277200 Sobic003G277200 Sobic003G419600--Sobic003G277200 Sobic003G419600--Sobic007G111700 Sobic003G419600--Sobic003G006100 Sobic010G116100 Sobic010G116100 Sobic003G419600--Sobic010G116100 Sobic005G057000--Sobic001G402400 Sobic005G057000--Sobic002G034301 Sobic002G283500 Sobic002G283500 Sobic005G057000--Sobic002G283500 Sobic005G057000--Sobic008G170400 Sobic009G079900 Sobic009G079900 Sobic005G057000--Sobic009G079900 Sobic005G057000--Sobic003G296500 Sobic005G231300 Sobic005G231300 Sobic005G057000--Sobic005G231300 Sobic005G057000--Sobic007G111700 Sobic003G270400 Sobic003G270400 Sobic005G057000--Sobic003G270400 Sobic005G110600--Sobic005G130700 Sobic005G110600--Sobic006G062300 Sobic004G297950 Sobic004G297950 Sobic005G110600--Sobic004G297950 Sobic001G140800 Sobic001G140800 Sobic005G110600--Sobic001G140800 Sobic005G110600--Sobic003G419600 Sobic010G133932 Sobic010G133932 Sobic005G110600--Sobic010G133932 Sobic005G110600--Sobic010G007000 Sobic003G269100 Sobic003G269100 Sobic005G110600--Sobic003G269100 Sobic001G484000 Sobic001G484000 Sobic005G110600--Sobic001G484000 Sobic003G371400 Sobic003G371400 Sobic005G112000--Sobic003G371400 Sobic003G082700 Sobic003G082700 Sobic005G112000--Sobic003G082700 Sobic001G388000 Sobic001G388000 Sobic005G112000--Sobic001G388000 Sobic005G112000--Sobic010G133932 Sobic005G112000--Sobic003G270400 Sobic003G366300 Sobic003G366300 Sobic005G112000--Sobic003G366300 Sobic001G208600 Sobic001G208600 Sobic005G112000--Sobic001G208600 Sobic005G112000--Sobic010G007000 Sobic006G160900 Sobic006G160900 Sobic005G112000--Sobic006G160900 Sobic008G114000--Sobic002G016400 Sobic001G264400 Sobic001G264400 Sobic008G114000--Sobic001G264400 Sobic008G113900 Sobic008G113900 Sobic008G114000--Sobic008G113900 Sobic007G208100 Sobic007G208100 Sobic008G114000--Sobic007G208100 Sobic008G114000--Sobic003G269100 Sobic008G114000--Sobic004G297950 Sobic001G382700 Sobic001G382700 Sobic008G114000--Sobic001G382700 Sobic001G099600 Sobic001G099600 Sobic008G114000--Sobic001G099600 Sobic009G061400 Sobic009G061400 Sobic008G114000--Sobic009G061400 Sobic006G062300--Sobic005G130700 Sobic006G062300--Sobic005G110600 Sobic006G062300--Sobic010G116100 Sobic006G062300--Sobic003G419600 Sobic006G062300--Sobic010G007000 Sobic006G062300--Sobic001G140800 Sobic006G062300--Sobic008G170400 Sobic006G062300--Sobic004G297950 Sobic006G062300--Sobic007G202100
Octagon: transcription factors


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