Gene annotation
Transcriptome id Sobic.005G057000.2
Synonym
Functional annotation Leucine Rich Repeat family protein, expressed
UniProt A0A1Z5RGU9
Pfam -
Panther DB PTHR23155 PTHR23155:SF599
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G19050 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os04g32940.1 : Leucine Rich Repeat family protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G402400 expressed protein -
2 Sobic.002G034301 - -
3 Sobic.002G283500 glutathione S-transferase, C-terminal domain containing protein, expressed -
4 Sobic.008G170400 expressed protein -
5 Sobic.009G079900 endoglucanase precursor, putative, expressed -
6 Sobic.003G296500 leucine rich repeat family protein, putative, expressed -
7 Sobic.005G231300 thaumatin, putative, expressed -
8 Sobic.007G111700 glutathione S-transferase, C-terminal domain containing protein, expressed -
9 Sobic.003G270400 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.010G007000 Leucine Rich Repeat family protein, expressed -
11 Sobic.001G067800 metal cation transporter, putative, expressed K07238: TC.ZIP, zupT, ZRT3, zinc transporter, ZIP family
12 Sobic.001G272600 powdery mildew resistance protein PM3b, putative, expressed -
13 Sobic.005G025900 "domain confirmed by Pfam database, expression supported by NCBI EST database,expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
14 Sobic.003G255600 expressed protein -
15 Sobic.003G052100 receptor-like protein kinase 2 precursor, putative, expressed -
16 Sobic.007G208100 heavy metal-associated domain containing protein, expressed -
17 Sobic.005G110600 glycosyl hydrolase, putative, expressed K01183: chitinase
18 Sobic.010G220300 glucan endo-1,3-beta-glucosidase 12 precursor, putative, expressed -
19 Sobic.002G376100 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
20 Sobic.008G114000 expressed protein -


Gene co-expression network
sample Sobic005G057000 Sobic005G057000 Sobic001G402400 Sobic001G402400 Sobic005G057000--Sobic001G402400 Sobic002G034301 Sobic002G034301 Sobic005G057000--Sobic002G034301 Sobic002G283500 Sobic002G283500 Sobic005G057000--Sobic002G283500 Sobic008G170400 Sobic008G170400 Sobic005G057000--Sobic008G170400 Sobic009G079900 Sobic009G079900 Sobic005G057000--Sobic009G079900 Sobic003G296500 Sobic003G296500 Sobic005G057000--Sobic003G296500 Sobic005G231300 Sobic005G231300 Sobic005G057000--Sobic005G231300 Sobic007G111700 Sobic007G111700 Sobic005G057000--Sobic007G111700 Sobic003G270400 Sobic003G270400 Sobic005G057000--Sobic003G270400 Sobic001G402400--Sobic003G270400 Sobic003G052100 Sobic003G052100 Sobic001G402400--Sobic003G052100 Sobic002G275500 Sobic002G275500 Sobic001G402400--Sobic002G275500 Sobic001G402400--Sobic003G296500 Sobic010G220300 Sobic010G220300 Sobic001G402400--Sobic010G220300 Sobic008G014700 Sobic008G014700 Sobic001G402400--Sobic008G014700 Sobic001G402400--Sobic005G057000 Sobic002G376100 Sobic002G376100 Sobic001G402400--Sobic002G376100 Sobic006G009500 Sobic006G009500 Sobic001G402400--Sobic006G009500 Sobic007G208100 Sobic007G208100 Sobic002G034301--Sobic007G208100 Sobic002G034301--Sobic005G231300 Sobic002G034301--Sobic005G057000 Sobic005G121700 Sobic005G121700 Sobic002G034301--Sobic005G121700 Sobic002G034301--Sobic007G111700 Sobic008G077300 Sobic008G077300 Sobic002G034301--Sobic008G077300 Sobic002G016400 Sobic002G016400 Sobic002G034301--Sobic002G016400 Sobic003G420100 Sobic003G420100 Sobic002G034301--Sobic003G420100 Sobic002G034301--Sobic003G052100 Sobic002G283500--Sobic005G057000 Sobic002G283500--Sobic008G170400 Sobic008G114000 Sobic008G114000 Sobic002G283500--Sobic008G114000 Sobic002G283500--Sobic002G016400 Sobic007G120301 Sobic007G120301 Sobic002G283500--Sobic007G120301 Sobic010G007000 Sobic010G007000 Sobic002G283500--Sobic010G007000 Sobic007G050500 Sobic007G050500 Sobic002G283500--Sobic007G050500 Sobic002G283500--Sobic007G111700 Sobic002G064600 Sobic002G064600 Sobic002G283500--Sobic002G064600 Sobic008G170400--Sobic007G111700 Sobic008G170400--Sobic002G016400 Sobic005G098400 Sobic005G098400 Sobic008G170400--Sobic005G098400 Sobic005G231400 Sobic005G231400 Sobic008G170400--Sobic005G231400 Sobic003G418300 Sobic003G418300 Sobic008G170400--Sobic003G418300 Sobic008G170400--Sobic010G007000 Sobic005G110600 Sobic005G110600 Sobic008G170400--Sobic005G110600 Sobic008G170400--Sobic002G064600 Sobic006G062300 Sobic006G062300 Sobic008G170400--Sobic006G062300 Sobic009G060700 Sobic009G060700 Sobic009G079900--Sobic009G060700 Sobic007G020700 Sobic007G020700 Sobic009G079900--Sobic007G020700 Sobic005G052700 Sobic005G052700 Sobic009G079900--Sobic005G052700 Sobic002G029600 Sobic002G029600 Sobic009G079900--Sobic002G029600 Sobic003G079100 Sobic003G079100 Sobic009G079900--Sobic003G079100 Sobic010G213600 Sobic010G213600 Sobic009G079900--Sobic010G213600 Sobic004G008600 Sobic004G008600 Sobic009G079900--Sobic004G008600 Sobic001G274400 Sobic001G274400 Sobic009G079900--Sobic001G274400 Sobic006G009700 Sobic006G009700 Sobic009G079900--Sobic006G009700 Sobic003G296500--Sobic001G402400 Sobic003G296500--Sobic007G208100 Sobic010G104400 Sobic010G104400 Sobic003G296500--Sobic010G104400 Sobic003G296500--Sobic005G231300 Sobic003G296500--Sobic003G052100 Sobic001G301900 Sobic001G301900 Sobic003G296500--Sobic001G301900 Sobic003G296500--Sobic010G220300 Sobic001G029800 Sobic001G029800 Sobic003G296500--Sobic001G029800 Sobic004G271500 Sobic004G271500 Sobic003G296500--Sobic004G271500 Sobic001G514300 Sobic001G514300 Sobic005G231300--Sobic001G514300 Sobic003G083600 Sobic003G083600 Sobic005G231300--Sobic003G083600 Sobic005G231300--Sobic009G079900 Sobic008G099100 Sobic008G099100 Sobic005G231300--Sobic008G099100 Sobic005G231300--Sobic007G208100 Sobic006G030200 Sobic006G030200 Sobic005G231300--Sobic006G030200 Sobic001G314000 Sobic001G314000 Sobic005G231300--Sobic001G314000 Sobic005G231300--Sobic008G077300 Sobic003G151900 Sobic003G151900 Sobic005G231300--Sobic003G151900 Sobic007G111700--Sobic008G170400 Sobic007G111700--Sobic002G016400 Sobic007G111700--Sobic005G098400 Sobic007G111700--Sobic007G050500 Sobic005G025900 Sobic005G025900 Sobic007G111700--Sobic005G025900 Sobic001G345200 Sobic001G345200 Sobic007G111700--Sobic001G345200 Sobic007G111700--Sobic002G034301 Sobic007G202100 Sobic007G202100 Sobic007G111700--Sobic007G202100 Sobic003G419600 Sobic003G419600 Sobic007G111700--Sobic003G419600 Sobic003G270400--Sobic001G402400 Sobic007G119500 Sobic007G119500 Sobic003G270400--Sobic007G119500 Sobic003G366300 Sobic003G366300 Sobic003G270400--Sobic003G366300 Sobic007G091900 Sobic007G091900 Sobic003G270400--Sobic007G091900 Sobic005G112000 Sobic005G112000 Sobic003G270400--Sobic005G112000 Sobic001G406700 Sobic001G406700 Sobic003G270400--Sobic001G406700 Sobic004G047600 Sobic004G047600 Sobic003G270400--Sobic004G047600 Sobic003G270400--Sobic008G014700 Sobic003G378800 Sobic003G378800 Sobic003G270400--Sobic003G378800
Octagon: transcription factors


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