Gene annotation
Transcriptome id Sobic.001G490500.1
Synonym Sb01g045870
Functional annotation conserved oligomeric Golgi complex component 4, related, putative, expressed
UniProt C5WWS3
Pfam PF08318
Panther DB PTHR24016 PTHR24016:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G01400 : -
RAP-DB (Rice) LOC_Os02g25840.1 : conserved oligomeric Golgi complex component 4, related, putative, expressed
MaizeGDB (Corn) Zm00025a000850 , Zm00025a053342
Brachypodium KQJ94541
Barley HORVU3Hr1G098260.1 , HORVU3Hr1G098260.2
Wheat TraesCS3D02G448100 , TraesCS3A02G455600
Populus -


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cDNA sequences
Sobic.001G490500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G161700 vesicle-fusing ATPase, putative, expressed K06027: NSF, vesicle-fusing ATPase
2 Sobic.001G220900 adaptin ear-binding coat-associated protein 2, putative, expressed -
3 Sobic.001G117800 coatomer alpha subunit, putative, expressed K05236: COPA, coatomer subunit alpha
4 Sobic.002G070600 coatomer subunit gamma-2, putative, expressed K17267: coatomer subunit gamma
5 Sobic.008G072200 coatomer subunit delta, putative, expressed -
6 Sobic.001G077900 SSA2 - 2S albumin seed storage family protein precursor, putative, expressed -
7 Sobic.001G522000 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
8 Sobic.001G338400 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
9 Sobic.003G029600 coatomer alpha subunit, putative, expressed K05236: COPA, coatomer subunit alpha
10 Sobic.004G212100 PPR repeat domain containing protein, putative, expressed -
11 Sobic.004G207900 nucleotide-sugar transporter family protein, putative, expressed -
12 Sobic.002G141700 unc-50, putative, expressed -
13 Sobic.009G120500 golgi transport complex protein-related, putative, expressed -
14 Sobic.002G295900 ribosomal protein S15 containing protein, expressed -
15 Sobic.002G423500 T-complex protein, putative, expressed K09498: T-complex protein 1 subunit zeta
16 Sobic.004G208500 eukaryotic translation initiation factor 2A, putative, expressed K15026: translation initiation factor 2A
17 Sobic.004G034300 transducin family protein, putative, expressed -
18 Sobic.002G367800 PPR repeat domain containing protein, putative, expressed -
19 Sobic.001G443200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
20 Sobic.007G161200 expressed protein -


Gene co-expression network
sample Sobic001G490500 Sobic001G490500 Sobic001G161700 Sobic001G161700 Sobic001G490500--Sobic001G161700 Sobic001G220900 Sobic001G220900 Sobic001G490500--Sobic001G220900 Sobic001G117800 Sobic001G117800 Sobic001G490500--Sobic001G117800 Sobic002G070600 Sobic002G070600 Sobic001G490500--Sobic002G070600 Sobic008G072200 Sobic008G072200 Sobic001G490500--Sobic008G072200 Sobic001G077900 Sobic001G077900 Sobic001G490500--Sobic001G077900 Sobic001G522000 Sobic001G522000 Sobic001G490500--Sobic001G522000 Sobic001G338400 Sobic001G338400 Sobic001G490500--Sobic001G338400 Sobic003G029600 Sobic003G029600 Sobic001G490500--Sobic003G029600 Sobic001G161700--Sobic002G070600 Sobic001G161700--Sobic008G072200 Sobic001G161700--Sobic001G490500 Sobic001G012900 Sobic001G012900 Sobic001G161700--Sobic001G012900 Sobic001G023100 Sobic001G023100 Sobic001G161700--Sobic001G023100 Sobic003G346400 Sobic003G346400 Sobic001G161700--Sobic003G346400 Sobic004G000100 Sobic004G000100 Sobic001G161700--Sobic004G000100 Sobic004G254800 Sobic004G254800 Sobic001G161700--Sobic004G254800 Sobic008G085700 Sobic008G085700 Sobic001G161700--Sobic008G085700 Sobic001G220900--Sobic001G490500 Sobic002G141700 Sobic002G141700 Sobic001G220900--Sobic002G141700 Sobic001G281900 Sobic001G281900 Sobic001G220900--Sobic001G281900 Sobic008G151500 Sobic008G151500 Sobic001G220900--Sobic008G151500 Sobic001G145500 Sobic001G145500 Sobic001G220900--Sobic001G145500 Sobic001G443200 Sobic001G443200 Sobic001G220900--Sobic001G443200 Sobic003G134800 Sobic003G134800 Sobic001G220900--Sobic003G134800 Sobic003G009300 Sobic003G009300 Sobic001G220900--Sobic003G009300 Sobic001G220900--Sobic001G077900 Sobic001G117800--Sobic003G029600 Sobic001G117800--Sobic002G070600 Sobic009G118900 Sobic009G118900 Sobic001G117800--Sobic009G118900 Sobic002G340900 Sobic002G340900 Sobic001G117800--Sobic002G340900 Sobic001G474400 Sobic001G474400 Sobic001G117800--Sobic001G474400 Sobic001G117800--Sobic008G072200 Sobic003G314700 Sobic003G314700 Sobic001G117800--Sobic003G314700 Sobic009G120500 Sobic009G120500 Sobic001G117800--Sobic009G120500 Sobic001G437400 Sobic001G437400 Sobic001G117800--Sobic001G437400 Sobic002G070600--Sobic008G072200 Sobic002G070600--Sobic001G117800 Sobic002G070600--Sobic001G161700 Sobic002G070600--Sobic008G085700 Sobic004G336300 Sobic004G336300 Sobic002G070600--Sobic004G336300 Sobic002G070600--Sobic003G029600 Sobic006G021700 Sobic006G021700 Sobic002G070600--Sobic006G021700 Sobic002G070600--Sobic009G118900 Sobic010G178600 Sobic010G178600 Sobic002G070600--Sobic010G178600 Sobic008G072200--Sobic002G070600 Sobic008G072200--Sobic001G161700 Sobic008G072200--Sobic004G336300 Sobic001G115700 Sobic001G115700 Sobic008G072200--Sobic001G115700 Sobic008G072200--Sobic001G117800 Sobic002G029300 Sobic002G029300 Sobic008G072200--Sobic002G029300 Sobic008G072200--Sobic001G490500 Sobic008G072200--Sobic003G134800 Sobic008G072200--Sobic008G085700 Sobic001G077900--Sobic001G443200 Sobic001G077900--Sobic002G141700 Sobic003G196200 Sobic003G196200 Sobic001G077900--Sobic003G196200 Sobic001G077900--Sobic001G161700 Sobic001G077900--Sobic003G009300 Sobic001G077900--Sobic001G490500 Sobic006G029000 Sobic006G029000 Sobic001G077900--Sobic006G029000 Sobic001G077900--Sobic004G000100 Sobic006G232000 Sobic006G232000 Sobic001G077900--Sobic006G232000 Sobic002G367800 Sobic002G367800 Sobic001G522000--Sobic002G367800 Sobic002G423500 Sobic002G423500 Sobic001G522000--Sobic002G423500 Sobic001G522000--Sobic001G490500 Sobic006G041100 Sobic006G041100 Sobic001G522000--Sobic006G041100 Sobic003G388900 Sobic003G388900 Sobic001G522000--Sobic003G388900 Sobic003G205400 Sobic003G205400 Sobic001G522000--Sobic003G205400 Sobic002G402500 Sobic002G402500 Sobic001G522000--Sobic002G402500 Sobic006G265600 Sobic006G265600 Sobic001G522000--Sobic006G265600 Sobic001G522000--Sobic001G117800 Sobic003G348800 Sobic003G348800 Sobic001G338400--Sobic003G348800 Sobic008G150300 Sobic008G150300 Sobic001G338400--Sobic008G150300 Sobic001G338400--Sobic001G281900 Sobic001G338400--Sobic001G145500 Sobic004G010900 Sobic004G010900 Sobic001G338400--Sobic004G010900 Sobic001G338400--Sobic001G490500 Sobic001G230100 Sobic001G230100 Sobic001G338400--Sobic001G230100 Sobic002G342500 Sobic002G342500 Sobic001G338400--Sobic002G342500 Sobic001G338400--Sobic006G029000 Sobic003G029600--Sobic001G117800 Sobic003G029600--Sobic003G314700 Sobic003G029600--Sobic002G070600 Sobic003G029600--Sobic002G340900 Sobic001G301200 Sobic001G301200 Sobic003G029600--Sobic001G301200 Sobic001G449900 Sobic001G449900 Sobic003G029600--Sobic001G449900 Sobic008G124800 Sobic008G124800 Sobic003G029600--Sobic008G124800 Sobic003G029600--Sobic009G118900 Sobic003G029600--Sobic001G437400
Octagon: transcription factors


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