Gene annotation
Transcriptome id Sobic.002G295900.1
Synonym Sb02g032720
Functional annotation ribosomal protein S15 containing protein, expressed
UniProt C5X8D5
Pfam PF00312
Panther DB PTHR23321 PTHR23321:SF26
NCBI CDD KOG2815; Mitochondrial/choloroplast ribosomal protein S15
KEGG Orthology -
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0005622intracellular GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT1G15810 : S15/NS1, RNA-binding protein
RAP-DB (Rice) LOC_Os02g55940.1 : ribosomal protein S15 containing protein, expressed
MaizeGDB (Corn) Zm00025a047883 , Zm00025a032898
Brachypodium KQK01200
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G249800 AARP2CN domain containing protein, expressed K14799: pre-rRNA-processing protein TSR1
2 Sobic.003G388900 PPR repeat domain containing protein, putative, expressed -
3 Sobic.001G304000 enoyl-CoA hydratase/isomerase family protein, putative, expressed K05605: 3-hydroxyisobutyryl-CoA hydrolase
4 Sobic.004G212100 PPR repeat domain containing protein, putative, expressed -
5 Sobic.002G367800 PPR repeat domain containing protein, putative, expressed -
6 Sobic.001G490500 conserved oligomeric Golgi complex component 4, related, putative, expressed -
7 Sobic.003G196200 elongation factor TS family protein, expressed -
8 Sobic.006G029000 nicotiana lesion-inducing like, putative, expressed -
9 Sobic.001G161700 vesicle-fusing ATPase, putative, expressed K06027: NSF, vesicle-fusing ATPase
10 Sobic.002G402500 ribosomal protein, putative, expressed K02996: RP-S9, MRPS9, small subunit ribosomal protein S9
11 Sobic.003G326900 expressed protein -
12 Sobic.001G522000 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
13 Sobic.001G214900 expressed protein -
14 Sobic.004G208500 eukaryotic translation initiation factor 2A, putative, expressed K15026: translation initiation factor 2A
15 Sobic.001G338400 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
16 Sobic.001G387800 outer mitochondrial membrane porin, putative, expressed K11518: mitochondrial import receptor subunit TOM40
17 Sobic.001G060300 expressed protein -
18 Sobic.002G249800 DnaK family protein, putative, expressed K04043: dnaK, molecular chaperone DnaK
19 Sobic.002G246700 eukaryotic translation initiation factor 3 subunit C, putative, expressed K03252: translation initiation factor 3 subunit C
20 Sobic.002G423500 T-complex protein, putative, expressed K09498: T-complex protein 1 subunit zeta


Gene co-expression network
sample Sobic002G295900 Sobic002G295900 Sobic009G249800 Sobic009G249800 Sobic002G295900--Sobic009G249800 Sobic003G388900 Sobic003G388900 Sobic002G295900--Sobic003G388900 Sobic001G304000 Sobic001G304000 Sobic002G295900--Sobic001G304000 Sobic004G212100 Sobic004G212100 Sobic002G295900--Sobic004G212100 Sobic002G367800 Sobic002G367800 Sobic002G295900--Sobic002G367800 Sobic001G490500 Sobic001G490500 Sobic002G295900--Sobic001G490500 Sobic003G196200 Sobic003G196200 Sobic002G295900--Sobic003G196200 Sobic006G029000 Sobic006G029000 Sobic002G295900--Sobic006G029000 Sobic001G161700 Sobic001G161700 Sobic002G295900--Sobic001G161700 Sobic002G408900 Sobic002G408900 Sobic009G249800--Sobic002G408900 Sobic004G208500 Sobic004G208500 Sobic009G249800--Sobic004G208500 Sobic001G251600 Sobic001G251600 Sobic009G249800--Sobic001G251600 Sobic002G246700 Sobic002G246700 Sobic009G249800--Sobic002G246700 Sobic009G249800--Sobic002G295900 Sobic006G010400 Sobic006G010400 Sobic009G249800--Sobic006G010400 Sobic001G015400 Sobic001G015400 Sobic009G249800--Sobic001G015400 Sobic001G460500 Sobic001G460500 Sobic009G249800--Sobic001G460500 Sobic004G256000 Sobic004G256000 Sobic009G249800--Sobic004G256000 Sobic003G388900--Sobic002G367800 Sobic002G402500 Sobic002G402500 Sobic003G388900--Sobic002G402500 Sobic001G522000 Sobic001G522000 Sobic003G388900--Sobic001G522000 Sobic003G202100 Sobic003G202100 Sobic003G388900--Sobic003G202100 Sobic003G388900--Sobic004G212100 Sobic003G388900--Sobic001G304000 Sobic003G388900--Sobic002G295900 Sobic001G413100 Sobic001G413100 Sobic003G388900--Sobic001G413100 Sobic003G205400 Sobic003G205400 Sobic003G388900--Sobic003G205400 Sobic001G304000--Sobic003G202100 Sobic008G171400 Sobic008G171400 Sobic001G304000--Sobic008G171400 Sobic005G018800 Sobic005G018800 Sobic001G304000--Sobic005G018800 Sobic002G071100 Sobic002G071100 Sobic001G304000--Sobic002G071100 Sobic001G304000--Sobic003G388900 Sobic006G020900 Sobic006G020900 Sobic001G304000--Sobic006G020900 Sobic001G178500 Sobic001G178500 Sobic001G304000--Sobic001G178500 Sobic007G206300 Sobic007G206300 Sobic001G304000--Sobic007G206300 Sobic008G168200 Sobic008G168200 Sobic001G304000--Sobic008G168200 Sobic004G212100--Sobic002G367800 Sobic001G011000 Sobic001G011000 Sobic004G212100--Sobic001G011000 Sobic009G041800 Sobic009G041800 Sobic004G212100--Sobic009G041800 Sobic004G212100--Sobic003G388900 Sobic002G070300 Sobic002G070300 Sobic004G212100--Sobic002G070300 Sobic004G212100--Sobic001G161700 Sobic004G034300 Sobic004G034300 Sobic004G212100--Sobic004G034300 Sobic004G212100--Sobic001G522000 Sobic004G212100--Sobic001G490500 Sobic002G367800--Sobic004G212100 Sobic002G367800--Sobic001G011000 Sobic002G367800--Sobic003G388900 Sobic002G367800--Sobic009G041800 Sobic002G367800--Sobic001G522000 Sobic004G356300 Sobic004G356300 Sobic002G367800--Sobic004G356300 Sobic001G214900 Sobic001G214900 Sobic002G367800--Sobic001G214900 Sobic002G367800--Sobic002G071100 Sobic002G367800--Sobic002G070300 Sobic001G490500--Sobic001G161700 Sobic001G220900 Sobic001G220900 Sobic001G490500--Sobic001G220900 Sobic001G117800 Sobic001G117800 Sobic001G490500--Sobic001G117800 Sobic002G070600 Sobic002G070600 Sobic001G490500--Sobic002G070600 Sobic008G072200 Sobic008G072200 Sobic001G490500--Sobic008G072200 Sobic001G077900 Sobic001G077900 Sobic001G490500--Sobic001G077900 Sobic001G490500--Sobic001G522000 Sobic001G338400 Sobic001G338400 Sobic001G490500--Sobic001G338400 Sobic003G029600 Sobic003G029600 Sobic001G490500--Sobic003G029600 Sobic001G387800 Sobic001G387800 Sobic003G196200--Sobic001G387800 Sobic008G102600 Sobic008G102600 Sobic003G196200--Sobic008G102600 Sobic003G196200--Sobic001G077900 Sobic004G045300 Sobic004G045300 Sobic003G196200--Sobic004G045300 Sobic003G196200--Sobic001G161700 Sobic003G196200--Sobic001G178500 Sobic008G110500 Sobic008G110500 Sobic003G196200--Sobic008G110500 Sobic004G000100 Sobic004G000100 Sobic003G196200--Sobic004G000100 Sobic001G473800 Sobic001G473800 Sobic003G196200--Sobic001G473800 Sobic005G111900 Sobic005G111900 Sobic006G029000--Sobic005G111900 Sobic006G029000--Sobic001G077900 Sobic009G149500 Sobic009G149500 Sobic006G029000--Sobic009G149500 Sobic001G112400 Sobic001G112400 Sobic006G029000--Sobic001G112400 Sobic006G029000--Sobic001G338400 Sobic001G443200 Sobic001G443200 Sobic006G029000--Sobic001G443200 Sobic009G089700 Sobic009G089700 Sobic006G029000--Sobic009G089700 Sobic004G181900 Sobic004G181900 Sobic006G029000--Sobic004G181900 Sobic006G029000--Sobic003G196200 Sobic001G161700--Sobic002G070600 Sobic001G161700--Sobic008G072200 Sobic001G161700--Sobic001G490500 Sobic001G012900 Sobic001G012900 Sobic001G161700--Sobic001G012900 Sobic001G023100 Sobic001G023100 Sobic001G161700--Sobic001G023100 Sobic003G346400 Sobic003G346400 Sobic001G161700--Sobic003G346400 Sobic001G161700--Sobic004G000100 Sobic004G254800 Sobic004G254800 Sobic001G161700--Sobic004G254800 Sobic008G085700 Sobic008G085700 Sobic001G161700--Sobic008G085700
Octagon: transcription factors


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