Gene annotation
Transcriptome id Sobic.003G009300.3,Sobic.003G009300.1
Synonym Sb03g000990
Functional annotation methyltransferase domain containing protein, putative, expressed
UniProt C5XJQ1 , A0A1B6Q0Q2
Pfam PF08241
Panther DB PTHR10108 PTHR10108:SF24
NCBI CDD KOG1540; Ubiquinone biosynthesis methyltransferase COQ5
KEGG Orthology K06127; 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase
Gene Ontology GO:0008168; methyltransferase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT5G57300 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os01g74520.1 : methyltransferase domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a039031 , Zm00025a052818
Brachypodium KQK11825 , KQK11826
Barley -
Wheat TraesCS2D02G499600 , TraesCS2A02G499500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G114400 OsGrx_S15.2 - glutaredoxin subgroup II, expressed K07390: grxD, monothiol glutaredoxin
2 Sobic.001G077900 SSA2 - 2S albumin seed storage family protein precursor, putative, expressed -
3 Sobic.006G232000 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
4 Sobic.001G220900 adaptin ear-binding coat-associated protein 2, putative, expressed -
5 Sobic.001G443200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
6 Sobic.007G176200 26S proteasome non-ATPase regulatory subunit 3, putative, expressed K03033: PSMD3, 26S proteasome regulatory subunit N3
7 Sobic.001G109300 adenylyl cyclase-associated protein, putative, expressed K17261: CAP1_2, adenylyl cyclase-associated protein
8 Sobic.002G141700 unc-50, putative, expressed -
9 Sobic.001G444300 expressed protein -
10 Sobic.004G347600 vacuolar ATP synthase subunit H, putative, expressed K02144: V-type H+-transporting ATPase subunit H
11 Sobic.003G261800 expressed protein -
12 Sobic.009G139800 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
13 Sobic.001G112400 cytochrome c oxidase assembly protein COX11, mitochondrial precursor, putative, expressed K02258: COX11, cytochrome c oxidase assembly protein subunit 11
14 Sobic.003G428200 MEMO1, putative, expressed K06990: MEMO1 family protein
15 Sobic.007G161200 expressed protein -
16 Sobic.002G087000 peptidase, T1 family, putative, expressed K02739: 20S proteasome subunit beta 2
17 Sobic.002G113800 spermidine synthase, putative, expressed K00797: speE, SRM, spermidine synthase
18 Sobic.003G087000 expressed protein -
19 Sobic.001G490500 conserved oligomeric Golgi complex component 4, related, putative, expressed -
20 Sobic.002G423800 trafficking protein particle complex subunit, putative, expressed -


Gene co-expression network
sample Sobic003G009300 Sobic003G009300 Sobic006G114400 Sobic006G114400 Sobic003G009300--Sobic006G114400 Sobic001G077900 Sobic001G077900 Sobic003G009300--Sobic001G077900 Sobic006G232000 Sobic006G232000 Sobic003G009300--Sobic006G232000 Sobic001G220900 Sobic001G220900 Sobic003G009300--Sobic001G220900 Sobic001G443200 Sobic001G443200 Sobic003G009300--Sobic001G443200 Sobic007G176200 Sobic007G176200 Sobic003G009300--Sobic007G176200 Sobic001G109300 Sobic001G109300 Sobic003G009300--Sobic001G109300 Sobic002G141700 Sobic002G141700 Sobic003G009300--Sobic002G141700 Sobic001G444300 Sobic001G444300 Sobic003G009300--Sobic001G444300 Sobic009G139800 Sobic009G139800 Sobic006G114400--Sobic009G139800 Sobic006G114400--Sobic003G009300 Sobic003G087000 Sobic003G087000 Sobic006G114400--Sobic003G087000 Sobic002G113800 Sobic002G113800 Sobic006G114400--Sobic002G113800 Sobic004G335000 Sobic004G335000 Sobic006G114400--Sobic004G335000 Sobic006G114400--Sobic002G141700 Sobic007G142500 Sobic007G142500 Sobic006G114400--Sobic007G142500 Sobic004G194900 Sobic004G194900 Sobic006G114400--Sobic004G194900 Sobic009G225000 Sobic009G225000 Sobic006G114400--Sobic009G225000 Sobic001G077900--Sobic001G443200 Sobic001G077900--Sobic002G141700 Sobic003G196200 Sobic003G196200 Sobic001G077900--Sobic003G196200 Sobic001G161700 Sobic001G161700 Sobic001G077900--Sobic001G161700 Sobic001G077900--Sobic003G009300 Sobic001G490500 Sobic001G490500 Sobic001G077900--Sobic001G490500 Sobic006G029000 Sobic006G029000 Sobic001G077900--Sobic006G029000 Sobic004G000100 Sobic004G000100 Sobic001G077900--Sobic004G000100 Sobic001G077900--Sobic006G232000 Sobic009G238800 Sobic009G238800 Sobic006G232000--Sobic009G238800 Sobic006G232000--Sobic003G009300 Sobic006G148200 Sobic006G148200 Sobic006G232000--Sobic006G148200 Sobic006G232000--Sobic001G077900 Sobic003G270600 Sobic003G270600 Sobic006G232000--Sobic003G270600 Sobic004G010900 Sobic004G010900 Sobic006G232000--Sobic004G010900 Sobic010G261600 Sobic010G261600 Sobic006G232000--Sobic010G261600 Sobic010G064600 Sobic010G064600 Sobic006G232000--Sobic010G064600 Sobic002G294200 Sobic002G294200 Sobic006G232000--Sobic002G294200 Sobic001G220900--Sobic001G490500 Sobic001G220900--Sobic002G141700 Sobic001G281900 Sobic001G281900 Sobic001G220900--Sobic001G281900 Sobic008G151500 Sobic008G151500 Sobic001G220900--Sobic008G151500 Sobic001G145500 Sobic001G145500 Sobic001G220900--Sobic001G145500 Sobic001G220900--Sobic001G443200 Sobic003G134800 Sobic003G134800 Sobic001G220900--Sobic003G134800 Sobic001G220900--Sobic003G009300 Sobic001G220900--Sobic001G077900 Sobic008G102600 Sobic008G102600 Sobic001G443200--Sobic008G102600 Sobic001G443200--Sobic004G000100 Sobic004G039400 Sobic004G039400 Sobic001G443200--Sobic004G039400 Sobic001G112400 Sobic001G112400 Sobic001G443200--Sobic001G112400 Sobic004G344800 Sobic004G344800 Sobic001G443200--Sobic004G344800 Sobic001G443200--Sobic002G141700 Sobic010G040900 Sobic010G040900 Sobic001G443200--Sobic010G040900 Sobic001G073600 Sobic001G073600 Sobic001G443200--Sobic001G073600 Sobic002G262200 Sobic002G262200 Sobic001G443200--Sobic002G262200 Sobic001G458700 Sobic001G458700 Sobic007G176200--Sobic001G458700 Sobic001G010700 Sobic001G010700 Sobic007G176200--Sobic001G010700 Sobic006G252200 Sobic006G252200 Sobic007G176200--Sobic006G252200 Sobic003G330500 Sobic003G330500 Sobic007G176200--Sobic003G330500 Sobic004G224900 Sobic004G224900 Sobic007G176200--Sobic004G224900 Sobic002G428200 Sobic002G428200 Sobic007G176200--Sobic002G428200 Sobic007G176200--Sobic004G335000 Sobic002G341800 Sobic002G341800 Sobic007G176200--Sobic002G341800 Sobic009G067000 Sobic009G067000 Sobic007G176200--Sobic009G067000 Sobic001G109300--Sobic007G176200 Sobic001G109300--Sobic009G139800 Sobic001G109300--Sobic006G252200 Sobic001G109300--Sobic001G010700 Sobic003G428200 Sobic003G428200 Sobic001G109300--Sobic003G428200 Sobic001G109300--Sobic003G330500 Sobic001G109300--Sobic001G281900 Sobic001G109300--Sobic001G458700 Sobic001G109300--Sobic009G067000 Sobic003G261800 Sobic003G261800 Sobic002G141700--Sobic003G261800 Sobic002G141700--Sobic001G443200 Sobic002G141700--Sobic001G077900 Sobic002G087000 Sobic002G087000 Sobic002G141700--Sobic002G087000 Sobic002G141700--Sobic001G220900 Sobic007G173700 Sobic007G173700 Sobic002G141700--Sobic007G173700 Sobic002G029300 Sobic002G029300 Sobic002G141700--Sobic002G029300 Sobic002G141700--Sobic003G134800 Sobic001G542900 Sobic001G542900 Sobic002G141700--Sobic001G542900 Sobic001G444300--Sobic001G145500 Sobic006G109700 Sobic006G109700 Sobic001G444300--Sobic006G109700 Sobic002G423800 Sobic002G423800 Sobic001G444300--Sobic002G423800 Sobic006G211800 Sobic006G211800 Sobic001G444300--Sobic006G211800 Sobic001G444300--Sobic007G176200 Sobic001G444300--Sobic006G252200 Sobic001G444300--Sobic002G428200 Sobic003G104700 Sobic003G104700 Sobic001G444300--Sobic003G104700 Sobic004G348900 Sobic004G348900 Sobic001G444300--Sobic004G348900
Octagon: transcription factors


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