Gene annotation
Transcriptome id Sobic.001G216100.1
Synonym Sb01g019030
Functional annotation expressed protein
UniProt C5WYC2
Pfam -
Panther DB PTHR36756 PTHR36756:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g34200.1 : expressed protein
MaizeGDB (Corn) Zm00025a006563
Brachypodium -
Barley HORVU1Hr1G042350.1 , HORVU1Hr1G042350.3 , HORVU1Hr1G042350.2
Wheat TraesCS1B02G175800 , TraesCS1A02G159400 , TraesCS1D02G156800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G121300 SWIRM domain containing protein, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
2 Sobic.010G028300 bromodomain domain containing protein, expressed -
3 Sobic.002G383300 MYST-like histone acetyltransferase 1, putative, expressed K11308: MYST1, MOF, histone acetyltransferase MYST1
4 Sobic.001G395100 - K12835: DDX42, ATP-dependent RNA helicase DDX42
5 Sobic.003G439800 growth inhibition and differentiation-related protein 88, putative, expressed -
6 Sobic.007G075900 SKP1, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
7 Sobic.007G056500 cullin, putative, expressed K03869: cullin 3
8 Sobic.004G266900 AAA-type ATPase family protein, putative, expressed K17681: ATPase family AAA domain-containing protein 3A/B
9 Sobic.009G036200 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, putative, expressed K11648: SMARCB1, SNF5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
10 Sobic.005G160400 zinc finger, C3HC4 type domain containing protein, expressed K19043: E3 ubiquitin-protein ligase RHF
11 Sobic.001G492200 OsFBK11 - F-box domain and kelch repeat containing protein, expressed -
12 Sobic.001G169600 F-box-like/WD repeat-containing protein TBL1XR1-A, putative, expressed -
13 Sobic.008G179700 TATA-binding protein, putative, expressed K03120: TBP, transcription initiation factor TFIID TATA-box-binding protein
14 Sobic.001G143500 pleckstrin homology domain-containing protein, putative, expressed -
15 Sobic.002G034600 zinc ion binding protein, putative, expressed -
16 Sobic.001G507400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
17 Sobic.006G014100 serine-rich 25 kDa antigen protein, putative, expressed -
18 Sobic.007G191700 expressed protein K08507: unconventional SNARE in the endoplasmic reticulum protein 1
19 Sobic.001G114500 ATP binding protein, putative, expressed K06883: uncharacterized protein
20 Sobic.001G473600 ZOS5-06 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic001G216100 Sobic001G216100 Sobic006G121300 Sobic006G121300 Sobic001G216100--Sobic006G121300 Sobic010G028300 Sobic010G028300 Sobic001G216100--Sobic010G028300 Sobic002G383300 Sobic002G383300 Sobic001G216100--Sobic002G383300 Sobic001G395100 Sobic001G395100 Sobic001G216100--Sobic001G395100 Sobic003G439800 Sobic003G439800 Sobic001G216100--Sobic003G439800 Sobic007G075900 Sobic007G075900 Sobic001G216100--Sobic007G075900 Sobic007G056500 Sobic007G056500 Sobic001G216100--Sobic007G056500 Sobic004G266900 Sobic004G266900 Sobic001G216100--Sobic004G266900 Sobic009G036200 Sobic009G036200 Sobic001G216100--Sobic009G036200 Sobic006G121300--Sobic001G395100 Sobic002G034600 Sobic002G034600 Sobic006G121300--Sobic002G034600 Sobic006G121300--Sobic001G216100 Sobic006G121300--Sobic010G028300 Sobic006G121300--Sobic007G056500 Sobic001G473600 Sobic001G473600 Sobic006G121300--Sobic001G473600 Sobic008G179700 Sobic008G179700 Sobic006G121300--Sobic008G179700 Sobic003G401100 Sobic003G401100 Sobic006G121300--Sobic003G401100 Sobic005G160400 Sobic005G160400 Sobic006G121300--Sobic005G160400 Sobic010G028300--Sobic003G401100 Sobic002G350300 Sobic002G350300 Sobic010G028300--Sobic002G350300 Sobic001G056200 Sobic001G056200 Sobic010G028300--Sobic001G056200 Sobic010G028300--Sobic006G121300 Sobic001G131800 Sobic001G131800 Sobic010G028300--Sobic001G131800 Sobic001G315100 Sobic001G315100 Sobic010G028300--Sobic001G315100 Sobic010G028300--Sobic008G179700 Sobic003G081000 Sobic003G081000 Sobic010G028300--Sobic003G081000 Sobic004G013600 Sobic004G013600 Sobic010G028300--Sobic004G013600 Sobic003G114500 Sobic003G114500 Sobic002G383300--Sobic003G114500 Sobic002G383300--Sobic001G216100 Sobic002G383300--Sobic006G121300 Sobic002G383300--Sobic010G028300 Sobic009G083200 Sobic009G083200 Sobic002G383300--Sobic009G083200 Sobic002G383300--Sobic007G056500 Sobic001G376800 Sobic001G376800 Sobic002G383300--Sobic001G376800 Sobic002G383300--Sobic007G075900 Sobic006G049100 Sobic006G049100 Sobic002G383300--Sobic006G049100 Sobic001G395100--Sobic006G121300 Sobic001G395100--Sobic002G034600 Sobic007G191700 Sobic007G191700 Sobic001G395100--Sobic007G191700 Sobic001G395100--Sobic001G473600 Sobic001G469800 Sobic001G469800 Sobic001G395100--Sobic001G469800 Sobic007G027700 Sobic007G027700 Sobic001G395100--Sobic007G027700 Sobic001G395100--Sobic007G056500 Sobic006G248500 Sobic006G248500 Sobic001G395100--Sobic006G248500 Sobic001G042200 Sobic001G042200 Sobic001G395100--Sobic001G042200 Sobic001G143500 Sobic001G143500 Sobic003G439800--Sobic001G143500 Sobic006G252700 Sobic006G252700 Sobic003G439800--Sobic006G252700 Sobic006G278700 Sobic006G278700 Sobic003G439800--Sobic006G278700 Sobic010G018700 Sobic010G018700 Sobic003G439800--Sobic010G018700 Sobic002G268400 Sobic002G268400 Sobic003G439800--Sobic002G268400 Sobic001G142100 Sobic001G142100 Sobic003G439800--Sobic001G142100 Sobic009G058500 Sobic009G058500 Sobic003G439800--Sobic009G058500 Sobic003G439800--Sobic003G401100 Sobic010G279700 Sobic010G279700 Sobic003G439800--Sobic010G279700 Sobic004G353200 Sobic004G353200 Sobic007G075900--Sobic004G353200 Sobic001G392300 Sobic001G392300 Sobic007G075900--Sobic001G392300 Sobic009G177500 Sobic009G177500 Sobic007G075900--Sobic009G177500 Sobic009G044800 Sobic009G044800 Sobic007G075900--Sobic009G044800 Sobic008G014500 Sobic008G014500 Sobic007G075900--Sobic008G014500 Sobic004G274200 Sobic004G274200 Sobic007G075900--Sobic004G274200 Sobic007G075900--Sobic003G401100 Sobic004G084300 Sobic004G084300 Sobic007G075900--Sobic004G084300 Sobic009G124700 Sobic009G124700 Sobic007G075900--Sobic009G124700 Sobic006G186400 Sobic006G186400 Sobic007G056500--Sobic006G186400 Sobic007G056500--Sobic002G034600 Sobic007G056500--Sobic001G042200 Sobic010G077500 Sobic010G077500 Sobic007G056500--Sobic010G077500 Sobic010G095700 Sobic010G095700 Sobic007G056500--Sobic010G095700 Sobic004G180900 Sobic004G180900 Sobic007G056500--Sobic004G180900 Sobic007G056500--Sobic001G395100 Sobic001G066300 Sobic001G066300 Sobic007G056500--Sobic001G066300 Sobic007G056500--Sobic006G121300 Sobic006G014100 Sobic006G014100 Sobic004G266900--Sobic006G014100 Sobic004G266900--Sobic001G395100 Sobic009G095100 Sobic009G095100 Sobic004G266900--Sobic009G095100 Sobic006G240100 Sobic006G240100 Sobic004G266900--Sobic006G240100 Sobic004G155600 Sobic004G155600 Sobic004G266900--Sobic004G155600 Sobic004G266900--Sobic006G121300 Sobic007G091600 Sobic007G091600 Sobic004G266900--Sobic007G091600 Sobic007G071200 Sobic007G071200 Sobic004G266900--Sobic007G071200 Sobic004G266900--Sobic007G075900 Sobic007G111100 Sobic007G111100 Sobic009G036200--Sobic007G111100 Sobic009G036200--Sobic001G395100 Sobic009G258400 Sobic009G258400 Sobic009G036200--Sobic009G258400 Sobic003G212900 Sobic003G212900 Sobic009G036200--Sobic003G212900 Sobic002G262700 Sobic002G262700 Sobic009G036200--Sobic002G262700 Sobic009G036200--Sobic006G121300 Sobic004G346100 Sobic004G346100 Sobic009G036200--Sobic004G346100 Sobic009G036200--Sobic001G042200 Sobic004G309900 Sobic004G309900 Sobic009G036200--Sobic004G309900
Octagon: transcription factors


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