Gene annotation
Transcriptome id Sobic.002G383300.3,Sobic.002G383300.1,Sobic.002G383300.2
Synonym HAM1, Sb02g039960
Functional annotation MYST-like histone acetyltransferase 1, putative, expressed
UniProt C5X2L1
Pfam PF11717 PF01853
Panther DB PTHR10615 PTHR10615:SF103
NCBI CDD KOG2747; Histone acetyltransferase (MYST family)
KEGG Orthology K11308; MYST1, MOF, histone acetyltransferase MYST1
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups GO:0006355regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT5G64610 : histone acetyltransferase of the MYST family 1
RAP-DB (Rice) LOC_Os07g43360.1 : MYST-like histone acetyltransferase 1, putative, expressed
MaizeGDB (Corn) Zm00025a048823 , Zm00025a015255
Brachypodium KQK15117 , PNT74710
Barley HORVU2Hr1G029100.1 , HORVU2Hr1G029100.2
Wheat TraesCS2D02G166900 , TraesCS2A02G159700 , TraesCS2B02G185300
Populus PNT48654


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cDNA sequences
Sobic.002G383300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G114500 zinc knuckle family protein, putative, expressed -
2 Sobic.001G216100 expressed protein -
3 Sobic.006G121300 SWIRM domain containing protein, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
4 Sobic.010G028300 bromodomain domain containing protein, expressed -
5 Sobic.009G083200 coiled-coil domain-containing protein 25, putative, expressed -
6 Sobic.007G056500 cullin, putative, expressed K03869: cullin 3
7 Sobic.001G376800 - K13116: DDX41, ATP-dependent RNA helicase DDX41
8 Sobic.007G075900 SKP1, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
9 Sobic.006G049100 expressed protein -
10 Sobic.010G077500 protein of unknown function DUF1296 domain containing protein, expressed -
11 Sobic.006G161000 CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07359: calcium/calmodulin-dependent protein kinase kinase 2
12 Sobic.001G395100 - K12835: DDX42, ATP-dependent RNA helicase DDX42
13 Sobic.009G036200 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, putative, expressed K11648: SMARCB1, SNF5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
14 Sobic.002G034600 zinc ion binding protein, putative, expressed -
15 Sobic.009G092400 zinc finger, C3HC4 type family protein, expressed -
16 Sobic.003G132000 proteasome subunit, putative, expressed K12176: COPS2, CSN2, COP9 signalosome complex subunit 2
17 Sobic.007G091600 proline rich protein 3, putative, expressed -
18 Sobic.007G009700 nucleic acid binding protein, putative, expressed K12839: SMNDC1, survival of motor neuron-related-splicing factor 30
19 Sobic.004G266900 AAA-type ATPase family protein, putative, expressed K17681: ATPase family AAA domain-containing protein 3A/B
20 Sobic.001G473600 ZOS5-06 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic002G383300 Sobic002G383300 Sobic003G114500 Sobic003G114500 Sobic002G383300--Sobic003G114500 Sobic001G216100 Sobic001G216100 Sobic002G383300--Sobic001G216100 Sobic006G121300 Sobic006G121300 Sobic002G383300--Sobic006G121300 Sobic010G028300 Sobic010G028300 Sobic002G383300--Sobic010G028300 Sobic009G083200 Sobic009G083200 Sobic002G383300--Sobic009G083200 Sobic007G056500 Sobic007G056500 Sobic002G383300--Sobic007G056500 Sobic001G376800 Sobic001G376800 Sobic002G383300--Sobic001G376800 Sobic007G075900 Sobic007G075900 Sobic002G383300--Sobic007G075900 Sobic006G049100 Sobic006G049100 Sobic002G383300--Sobic006G049100 Sobic009G151200 Sobic009G151200 Sobic003G114500--Sobic009G151200 Sobic003G114500--Sobic002G383300 Sobic006G161000 Sobic006G161000 Sobic003G114500--Sobic006G161000 Sobic010G077500 Sobic010G077500 Sobic003G114500--Sobic010G077500 Sobic004G049700 Sobic004G049700 Sobic003G114500--Sobic004G049700 Sobic001G424600 Sobic001G424600 Sobic003G114500--Sobic001G424600 Sobic003G114500--Sobic007G056500 Sobic007G187600 Sobic007G187600 Sobic003G114500--Sobic007G187600 Sobic003G114500--Sobic006G049100 Sobic001G216100--Sobic006G121300 Sobic001G216100--Sobic010G028300 Sobic001G216100--Sobic002G383300 Sobic001G395100 Sobic001G395100 Sobic001G216100--Sobic001G395100 Sobic003G439800 Sobic003G439800 Sobic001G216100--Sobic003G439800 Sobic001G216100--Sobic007G075900 Sobic001G216100--Sobic007G056500 Sobic004G266900 Sobic004G266900 Sobic001G216100--Sobic004G266900 Sobic009G036200 Sobic009G036200 Sobic001G216100--Sobic009G036200 Sobic006G121300--Sobic001G395100 Sobic002G034600 Sobic002G034600 Sobic006G121300--Sobic002G034600 Sobic006G121300--Sobic001G216100 Sobic006G121300--Sobic010G028300 Sobic006G121300--Sobic007G056500 Sobic001G473600 Sobic001G473600 Sobic006G121300--Sobic001G473600 Sobic008G179700 Sobic008G179700 Sobic006G121300--Sobic008G179700 Sobic003G401100 Sobic003G401100 Sobic006G121300--Sobic003G401100 Sobic005G160400 Sobic005G160400 Sobic006G121300--Sobic005G160400 Sobic010G028300--Sobic003G401100 Sobic002G350300 Sobic002G350300 Sobic010G028300--Sobic002G350300 Sobic001G056200 Sobic001G056200 Sobic010G028300--Sobic001G056200 Sobic010G028300--Sobic006G121300 Sobic001G131800 Sobic001G131800 Sobic010G028300--Sobic001G131800 Sobic001G315100 Sobic001G315100 Sobic010G028300--Sobic001G315100 Sobic010G028300--Sobic008G179700 Sobic003G081000 Sobic003G081000 Sobic010G028300--Sobic003G081000 Sobic004G013600 Sobic004G013600 Sobic010G028300--Sobic004G013600 Sobic006G225300 Sobic006G225300 Sobic009G083200--Sobic006G225300 Sobic010G193800 Sobic010G193800 Sobic009G083200--Sobic010G193800 Sobic004G226800 Sobic004G226800 Sobic009G083200--Sobic004G226800 Sobic002G256300 Sobic002G256300 Sobic009G083200--Sobic002G256300 Sobic009G058500 Sobic009G058500 Sobic009G083200--Sobic009G058500 Sobic007G014900 Sobic007G014900 Sobic009G083200--Sobic007G014900 Sobic010G083700 Sobic010G083700 Sobic009G083200--Sobic010G083700 Sobic004G356900 Sobic004G356900 Sobic009G083200--Sobic004G356900 Sobic010G209000 Sobic010G209000 Sobic009G083200--Sobic010G209000 Sobic006G186400 Sobic006G186400 Sobic007G056500--Sobic006G186400 Sobic007G056500--Sobic002G034600 Sobic001G042200 Sobic001G042200 Sobic007G056500--Sobic001G042200 Sobic007G056500--Sobic010G077500 Sobic010G095700 Sobic010G095700 Sobic007G056500--Sobic010G095700 Sobic004G180900 Sobic004G180900 Sobic007G056500--Sobic004G180900 Sobic007G056500--Sobic001G395100 Sobic001G066300 Sobic001G066300 Sobic007G056500--Sobic001G066300 Sobic007G056500--Sobic006G121300 Sobic001G376800--Sobic002G034600 Sobic001G376800--Sobic007G056500 Sobic001G376800--Sobic006G121300 Sobic001G376800--Sobic001G473600 Sobic004G059000 Sobic004G059000 Sobic001G376800--Sobic004G059000 Sobic006G017000 Sobic006G017000 Sobic001G376800--Sobic006G017000 Sobic001G376800--Sobic010G028300 Sobic001G376800--Sobic001G395100 Sobic001G376800--Sobic001G131800 Sobic004G353200 Sobic004G353200 Sobic007G075900--Sobic004G353200 Sobic001G392300 Sobic001G392300 Sobic007G075900--Sobic001G392300 Sobic009G177500 Sobic009G177500 Sobic007G075900--Sobic009G177500 Sobic009G044800 Sobic009G044800 Sobic007G075900--Sobic009G044800 Sobic008G014500 Sobic008G014500 Sobic007G075900--Sobic008G014500 Sobic004G274200 Sobic004G274200 Sobic007G075900--Sobic004G274200 Sobic007G075900--Sobic003G401100 Sobic004G084300 Sobic004G084300 Sobic007G075900--Sobic004G084300 Sobic009G124700 Sobic009G124700 Sobic007G075900--Sobic009G124700 Sobic006G049100--Sobic010G077500 Sobic006G049100--Sobic001G042200 Sobic001G487100 Sobic001G487100 Sobic006G049100--Sobic001G487100 Sobic006G049100--Sobic007G056500 Sobic001G168900 Sobic001G168900 Sobic006G049100--Sobic001G168900 Sobic004G345400 Sobic004G345400 Sobic006G049100--Sobic004G345400 Sobic006G049100--Sobic007G187600 Sobic003G132000 Sobic003G132000 Sobic006G049100--Sobic003G132000 Sobic006G049100--Sobic001G395100
Octagon: transcription factors


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