Gene annotation
Transcriptome id Sobic.001G480100.3,Sobic.001G480100.2,Sobic.001G480100.4,Sobic.001G480100.1
Synonym
Functional annotation -
UniProt A0A1B6QQ34
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.001G480100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G209700 FAR1 family protein, expressed -
2 Sobic.007G125000 OsAPRL4 adenosine 5\'-phosphosulfate reductase-like OsAPRL4, expressed -
3 Sobic.009G092400 zinc finger, C3HC4 type family protein, expressed -
4 Sobic.001G384300 myb-like DNA-binding domain containing protein, expressed -
5 Sobic.009G228000 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
6 Sobic.007G008900 SAC domain containing protein, putative, expressed -
7 Sobic.002G112700 glutamine-dependent NAD, putative, expressed K01950: E6.3.5.1, NADSYN1, QNS1, NAD+ synthase (glutamine-hydrolysing)
8 Sobic.007G218000 chloride transporter, chloride channel family, putative, expressed -
9 Sobic.010G226000 expressed protein -
10 Sobic.004G084700 - -
11 Sobic.003G241700 SET domain containing protein, expressed -
12 Sobic.006G029700 FAD dependent oxidoreductase domain containing protein, expressed K00111: glpA, glycerol-3-phosphate dehydrogenase
13 Sobic.009G056500 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.007G017800 OsFBX142 - F-box domain containing protein, expressed -
15 Sobic.002G083500 OsFBX136 - F-box domain containing protein, expressed -
16 Sobic.010G213500 ubiquitin carboxyl-terminal hydrolase family protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
17 Sobic.003G199001 - -
18 Sobic.008G113100 protein binding protein, putative, expressed -
19 Sobic.009G107300 3\'-5\' exonuclease, putative, expressed -
20 Sobic.006G101800 synaptonemal complex protein 2, putative, expressed -


Gene co-expression network
sample Sobic001G480100 Sobic001G480100 Sobic004G209700 Sobic004G209700 Sobic001G480100--Sobic004G209700 Sobic007G125000 Sobic007G125000 Sobic001G480100--Sobic007G125000 Sobic009G092400 Sobic009G092400 Sobic001G480100--Sobic009G092400 Sobic001G384300 Sobic001G384300 Sobic001G480100--Sobic001G384300 Sobic009G228000 Sobic009G228000 Sobic001G480100--Sobic009G228000 Sobic007G008900 Sobic007G008900 Sobic001G480100--Sobic007G008900 Sobic002G112700 Sobic002G112700 Sobic001G480100--Sobic002G112700 Sobic007G218000 Sobic007G218000 Sobic001G480100--Sobic007G218000 Sobic010G226000 Sobic010G226000 Sobic001G480100--Sobic010G226000 Sobic001G433800 Sobic001G433800 Sobic004G209700--Sobic001G433800 Sobic003G360400 Sobic003G360400 Sobic004G209700--Sobic003G360400 Sobic006G096900 Sobic006G096900 Sobic004G209700--Sobic006G096900 Sobic002G154000 Sobic002G154000 Sobic004G209700--Sobic002G154000 Sobic004G209700--Sobic010G226000 Sobic003G241700 Sobic003G241700 Sobic004G209700--Sobic003G241700 Sobic009G044800 Sobic009G044800 Sobic004G209700--Sobic009G044800 Sobic004G209700--Sobic009G092400 Sobic002G083500 Sobic002G083500 Sobic004G209700--Sobic002G083500 Sobic007G125000--Sobic007G218000 Sobic007G125000--Sobic002G112700 Sobic007G125000--Sobic009G092400 Sobic007G132100 Sobic007G132100 Sobic007G125000--Sobic007G132100 Sobic009G192300 Sobic009G192300 Sobic007G125000--Sobic009G192300 Sobic002G164300 Sobic002G164300 Sobic007G125000--Sobic002G164300 Sobic007G125000--Sobic007G008900 Sobic009G126600 Sobic009G126600 Sobic007G125000--Sobic009G126600 Sobic004G072100 Sobic004G072100 Sobic007G125000--Sobic004G072100 Sobic009G092400--Sobic007G218000 Sobic005G160400 Sobic005G160400 Sobic009G092400--Sobic005G160400 Sobic009G092400--Sobic009G044800 Sobic009G249700 Sobic009G249700 Sobic009G092400--Sobic009G249700 Sobic009G092400--Sobic007G125000 Sobic009G092400--Sobic004G209700 Sobic002G303600 Sobic002G303600 Sobic009G092400--Sobic002G303600 Sobic006G180000 Sobic006G180000 Sobic009G092400--Sobic006G180000 Sobic009G092400--Sobic007G132100 Sobic007G090430 Sobic007G090430 Sobic001G384300--Sobic007G090430 Sobic001G384300--Sobic006G096900 Sobic001G384300--Sobic002G083500 Sobic001G227200 Sobic001G227200 Sobic001G384300--Sobic001G227200 Sobic002G343901 Sobic002G343901 Sobic001G384300--Sobic002G343901 Sobic001G384300--Sobic001G433800 Sobic001G456900 Sobic001G456900 Sobic001G384300--Sobic001G456900 Sobic008G113100 Sobic008G113100 Sobic001G384300--Sobic008G113100 Sobic008G162900 Sobic008G162900 Sobic001G384300--Sobic008G162900 Sobic009G107300 Sobic009G107300 Sobic009G228000--Sobic009G107300 Sobic003G043000 Sobic003G043000 Sobic009G228000--Sobic003G043000 Sobic004G240400 Sobic004G240400 Sobic009G228000--Sobic004G240400 Sobic009G228000--Sobic003G241700 Sobic003G363700 Sobic003G363700 Sobic009G228000--Sobic003G363700 Sobic002G063900 Sobic002G063900 Sobic009G228000--Sobic002G063900 Sobic003G297500 Sobic003G297500 Sobic009G228000--Sobic003G297500 Sobic009G228000--Sobic004G209700 Sobic006G234700 Sobic006G234700 Sobic009G228000--Sobic006G234700 Sobic001G451400 Sobic001G451400 Sobic007G008900--Sobic001G451400 Sobic007G008900--Sobic002G112700 Sobic001G114000 Sobic001G114000 Sobic007G008900--Sobic001G114000 Sobic007G011300 Sobic007G011300 Sobic007G008900--Sobic007G011300 Sobic003G059750 Sobic003G059750 Sobic007G008900--Sobic003G059750 Sobic004G067700 Sobic004G067700 Sobic007G008900--Sobic004G067700 Sobic002G408200 Sobic002G408200 Sobic007G008900--Sobic002G408200 Sobic007G217000 Sobic007G217000 Sobic007G008900--Sobic007G217000 Sobic001G155000 Sobic001G155000 Sobic007G008900--Sobic001G155000 Sobic002G112700--Sobic001G114000 Sobic002G112700--Sobic007G218000 Sobic002G112700--Sobic007G008900 Sobic002G112700--Sobic003G059750 Sobic002G405800 Sobic002G405800 Sobic002G112700--Sobic002G405800 Sobic003G444800 Sobic003G444800 Sobic002G112700--Sobic003G444800 Sobic002G112700--Sobic004G072100 Sobic002G112700--Sobic007G011300 Sobic009G166300 Sobic009G166300 Sobic002G112700--Sobic009G166300 Sobic007G218000--Sobic007G132100 Sobic007G218000--Sobic004G072100 Sobic007G218000--Sobic002G112700 Sobic006G131000 Sobic006G131000 Sobic007G218000--Sobic006G131000 Sobic007G218000--Sobic009G044800 Sobic010G204400 Sobic010G204400 Sobic007G218000--Sobic010G204400 Sobic006G012500 Sobic006G012500 Sobic007G218000--Sobic006G012500 Sobic007G218000--Sobic009G249700 Sobic007G218000--Sobic009G092400 Sobic010G226000--Sobic001G451400 Sobic009G256400 Sobic009G256400 Sobic010G226000--Sobic009G256400 Sobic010G226000--Sobic004G209700 Sobic009G165700 Sobic009G165700 Sobic010G226000--Sobic009G165700 Sobic003G166750 Sobic003G166750 Sobic010G226000--Sobic003G166750 Sobic001G441400 Sobic001G441400 Sobic010G226000--Sobic001G441400 Sobic001G457800 Sobic001G457800 Sobic010G226000--Sobic001G457800 Sobic001G111850 Sobic001G111850 Sobic010G226000--Sobic001G111850 Sobic010G226000--Sobic003G444800
Octagon: transcription factors


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