Gene annotation
Transcriptome id Sobic.006G101800.2,Sobic.006G101800.3,Sobic.006G101800.1
Synonym ZYP1, Sb06g018530, ZYP1a
Functional annotation synaptonemal complex protein 2, putative, expressed
UniProt A0A1B6PL93 , A0A1B6PL96 , A0A1Z5RE73
Pfam -
Panther DB PTHR23160 PTHR23160:SF3
NCBI CDD KOG0978; E3 ubiquitin ligase involved in syntaxin degradation
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G22260 : Myosin heavy chain-related protein
RAP-DB (Rice) LOC_Os04g37960.1 : synaptonemal complex protein 2, putative, expressed
MaizeGDB (Corn) Zm00025a056186
Brachypodium KQJ82914 , KQJ82913
Barley -
Wheat TraesCS2D02G318100 , TraesCS2D02G318100 , TraesCS2D02G318100 , TraesCS2D02G318100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G059750 - K11797: PHIP, PH-interacting protein
2 Sobic.007G218000 chloride transporter, chloride channel family, putative, expressed -
3 Sobic.010G226000 expressed protein -
4 Sobic.007G172200 inositol or phosphatidylinositol phosphatase/ phosphoric monoester hydrolase, putative, expressed K18081: myotubularin-related protein 1/2
5 Sobic.002G353600 expressed protein -
6 Sobic.009G249700 expressed protein -
7 Sobic.004G084700 - -
8 Sobic.003G444800 expressed protein -
9 Sobic.007G008900 SAC domain containing protein, putative, expressed -
10 Sobic.007G103600 protein of unknown function DUF1296 domain containing protein, expressed -
11 Sobic.001G451400 HEAT repeat family protein, putative, expressed K15305: VAC14, vacuole morphology and inheritance protein 14
12 Sobic.003G212900 zinc ion binding protein, putative, expressed -
13 Sobic.001G452000 heat shock protein DnaJ, putative, expressed K03686: molecular chaperone DnaJ
14 Sobic.002G112700 glutamine-dependent NAD, putative, expressed K01950: E6.3.5.1, NADSYN1, QNS1, NAD+ synthase (glutamine-hydrolysing)
15 Sobic.004G209700 FAR1 family protein, expressed -
16 Sobic.003G147000 phospholipase D p1, putative, expressed K01115: phospholipase D1/2
17 Sobic.008G153000 MATH domain containing protein, expressed -
18 Sobic.006G174850 - K15193: SPTY2D1, protein SPT2
19 Sobic.003G180900 SLT1 protein, putative, expressed -
20 Sobic.001G376200 auxin response factor, putative, expressed -


Gene co-expression network
sample Sobic006G101800 Sobic006G101800 Sobic003G059750 Sobic003G059750 Sobic006G101800--Sobic003G059750 Sobic007G218000 Sobic007G218000 Sobic006G101800--Sobic007G218000 Sobic010G226000 Sobic010G226000 Sobic006G101800--Sobic010G226000 Sobic007G172200 Sobic007G172200 Sobic006G101800--Sobic007G172200 Sobic002G353600 Sobic002G353600 Sobic006G101800--Sobic002G353600 Sobic009G249700 Sobic009G249700 Sobic006G101800--Sobic009G249700 Sobic004G084700 Sobic004G084700 Sobic006G101800--Sobic004G084700 Sobic003G444800 Sobic003G444800 Sobic006G101800--Sobic003G444800 Sobic007G008900 Sobic007G008900 Sobic006G101800--Sobic007G008900 Sobic007G103600 Sobic007G103600 Sobic003G059750--Sobic007G103600 Sobic005G207500 Sobic005G207500 Sobic003G059750--Sobic005G207500 Sobic005G112300 Sobic005G112300 Sobic003G059750--Sobic005G112300 Sobic010G279450 Sobic010G279450 Sobic003G059750--Sobic010G279450 Sobic002G404700 Sobic002G404700 Sobic003G059750--Sobic002G404700 Sobic003G059750--Sobic003G444800 Sobic001G311500 Sobic001G311500 Sobic003G059750--Sobic001G311500 Sobic002G405800 Sobic002G405800 Sobic003G059750--Sobic002G405800 Sobic002G071500 Sobic002G071500 Sobic003G059750--Sobic002G071500 Sobic007G132100 Sobic007G132100 Sobic007G218000--Sobic007G132100 Sobic004G072100 Sobic004G072100 Sobic007G218000--Sobic004G072100 Sobic002G112700 Sobic002G112700 Sobic007G218000--Sobic002G112700 Sobic006G131000 Sobic006G131000 Sobic007G218000--Sobic006G131000 Sobic009G044800 Sobic009G044800 Sobic007G218000--Sobic009G044800 Sobic010G204400 Sobic010G204400 Sobic007G218000--Sobic010G204400 Sobic006G012500 Sobic006G012500 Sobic007G218000--Sobic006G012500 Sobic007G218000--Sobic009G249700 Sobic009G092400 Sobic009G092400 Sobic007G218000--Sobic009G092400 Sobic001G451400 Sobic001G451400 Sobic010G226000--Sobic001G451400 Sobic009G256400 Sobic009G256400 Sobic010G226000--Sobic009G256400 Sobic004G209700 Sobic004G209700 Sobic010G226000--Sobic004G209700 Sobic009G165700 Sobic009G165700 Sobic010G226000--Sobic009G165700 Sobic003G166750 Sobic003G166750 Sobic010G226000--Sobic003G166750 Sobic001G441400 Sobic001G441400 Sobic010G226000--Sobic001G441400 Sobic001G457800 Sobic001G457800 Sobic010G226000--Sobic001G457800 Sobic001G111850 Sobic001G111850 Sobic010G226000--Sobic001G111850 Sobic010G226000--Sobic003G444800 Sobic001G273700 Sobic001G273700 Sobic007G172200--Sobic001G273700 Sobic001G370900 Sobic001G370900 Sobic007G172200--Sobic001G370900 Sobic007G133700 Sobic007G133700 Sobic007G172200--Sobic007G133700 Sobic003G118200 Sobic003G118200 Sobic007G172200--Sobic003G118200 Sobic007G172200--Sobic009G256400 Sobic003G422500 Sobic003G422500 Sobic007G172200--Sobic003G422500 Sobic005G001000 Sobic005G001000 Sobic007G172200--Sobic005G001000 Sobic007G172200--Sobic009G165700 Sobic008G132600 Sobic008G132600 Sobic007G172200--Sobic008G132600 Sobic003G397800 Sobic003G397800 Sobic002G353600--Sobic003G397800 Sobic007G146900 Sobic007G146900 Sobic002G353600--Sobic007G146900 Sobic002G297200 Sobic002G297200 Sobic002G353600--Sobic002G297200 Sobic002G353600--Sobic005G207500 Sobic002G264200 Sobic002G264200 Sobic002G353600--Sobic002G264200 Sobic002G353600--Sobic003G059750 Sobic001G206100 Sobic001G206100 Sobic002G353600--Sobic001G206100 Sobic004G257400 Sobic004G257400 Sobic002G353600--Sobic004G257400 Sobic003G445400 Sobic003G445400 Sobic002G353600--Sobic003G445400 Sobic009G249700--Sobic007G218000 Sobic003G093800 Sobic003G093800 Sobic009G249700--Sobic003G093800 Sobic003G189600 Sobic003G189600 Sobic009G249700--Sobic003G189600 Sobic003G394200 Sobic003G394200 Sobic009G249700--Sobic003G394200 Sobic005G034700 Sobic005G034700 Sobic009G249700--Sobic005G034700 Sobic004G345400 Sobic004G345400 Sobic009G249700--Sobic004G345400 Sobic010G169900 Sobic010G169900 Sobic009G249700--Sobic010G169900 Sobic009G249700--Sobic003G444800 Sobic007G042900 Sobic007G042900 Sobic009G249700--Sobic007G042900 Sobic001G452000 Sobic001G452000 Sobic004G084700--Sobic001G452000 Sobic010G236400 Sobic010G236400 Sobic004G084700--Sobic010G236400 Sobic004G084700--Sobic003G059750 Sobic004G084700--Sobic007G218000 Sobic004G084700--Sobic002G112700 Sobic005G118600 Sobic005G118600 Sobic004G084700--Sobic005G118600 Sobic008G153000 Sobic008G153000 Sobic004G084700--Sobic008G153000 Sobic008G047800 Sobic008G047800 Sobic004G084700--Sobic008G047800 Sobic009G040600 Sobic009G040600 Sobic004G084700--Sobic009G040600 SobicK028600 SobicK028600 Sobic003G444800--SobicK028600 Sobic003G444800--Sobic003G059750 Sobic002G103600 Sobic002G103600 Sobic003G444800--Sobic002G103600 Sobic004G357100 Sobic004G357100 Sobic003G444800--Sobic004G357100 Sobic007G042400 Sobic007G042400 Sobic003G444800--Sobic007G042400 Sobic003G444800--Sobic002G112700 Sobic003G444800--Sobic010G279450 Sobic006G234700 Sobic006G234700 Sobic003G444800--Sobic006G234700 Sobic001G376200 Sobic001G376200 Sobic003G444800--Sobic001G376200 Sobic007G008900--Sobic001G451400 Sobic007G008900--Sobic002G112700 Sobic001G114000 Sobic001G114000 Sobic007G008900--Sobic001G114000 Sobic007G011300 Sobic007G011300 Sobic007G008900--Sobic007G011300 Sobic007G008900--Sobic003G059750 Sobic004G067700 Sobic004G067700 Sobic007G008900--Sobic004G067700 Sobic002G408200 Sobic002G408200 Sobic007G008900--Sobic002G408200 Sobic007G217000 Sobic007G217000 Sobic007G008900--Sobic007G217000 Sobic001G155000 Sobic001G155000 Sobic007G008900--Sobic001G155000
Octagon: transcription factors


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