Gene annotation
Transcriptome id Sobic.001G532600.2,Sobic.001G532600.3,Sobic.001G532600.4,Sobic.001G532600.1
Synonym Sb01g049560
Functional annotation pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed
UniProt H0I4D9 , A0A1Z5SBU2 , A0A1Z5SBS4
Pfam PF12766 PF01243
Panther DB PTHR10851 PTHR10851:SF3
NCBI CDD KOG4558; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0010181; FMN binding GO:0004733pyridoxamine-phosphate oxidase activity GO:0008615pyridoxine biosynthetic process GO:0010181FMN binding GO:0008615pyridoxine biosynthetic process GO:0004733pyridoxamine-phosphate oxidase activity


Orthologs (automatic annotation)
TAIR AT2G46580 : Pyridoxamine 5\'-phosphate oxidase family protein
RAP-DB (Rice) LOC_Os03g02450.2,LOC_Os03g02450.1 : pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a000222
Brachypodium PNT78328 , KQK24006 , KQK24005 , KQK24004 , KQK24001
Barley HORVU4Hr1G086630.5 , HORVU4Hr1G086630.1 , HORVU4Hr1G086630.9 , HORVU4Hr1G086630.8
Wheat TraesCS5A02G529000 , TraesCS5A02G529000 , TraesCS4D02G353700 , TraesCS4B02G360700 , TraesCS4B02G359200 , TraesCS5A02G528100 , TraesCS4D02G353700 , TraesCS4B02G360700 , TraesCS4D02G352800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G376600 paramyosin, putative, expressed -
2 Sobic.004G130300 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed -
3 Sobic.007G017800 OsFBX142 - F-box domain containing protein, expressed -
4 Sobic.007G125000 OsAPRL4 adenosine 5\'-phosphosulfate reductase-like OsAPRL4, expressed -
5 Sobic.001G014200 protein kinase domain containing protein, expressed K08829: male germ cell-associated kinase
6 Sobic.002G181600 expressed protein -
7 Sobic.010G041400 6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
8 Sobic.010G154900 Divergent PAP2 family domain containing protein, expressed -
9 Sobic.009G192300 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
10 Sobic.010G098200 peroxidase family protein, expressed -
11 Sobic.001G405600 basic helix-loop-helix, putative, expressed K10863: aprataxin
12 Sobic.002G167500 expressed protein -
13 Sobic.010G204900 formamidopyrimidine-DNA glycosylase, putative, expressed K10563: mutM, formamidopyrimidine-DNA glycosylase
14 Sobic.003G120300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
15 Sobic.006G216100 expressed protein -
16 Sobic.004G120100 phosphoglucan, water dikinase, chloroplast precursor, putative, expressed K15535: phosphoglucan, water dikinase
17 Sobic.006G039400 cation efflux family protein, putative, expressed K14696: SLC30A9, solute carrier family 30 (zinc transporter), member 9
18 Sobic.010G140400 poor homologous synapsis 1 protein, putative, expressed -
19 Sobic.002G408200 sec8 exocyst complex component specific domain containing protein, expressed K06111: EXOC4, exocyst complex component 4
20 Sobic.009G107300 3\'-5\' exonuclease, putative, expressed -


Gene co-expression network
sample Sobic001G532600 Sobic001G532600 Sobic002G376600 Sobic002G376600 Sobic001G532600--Sobic002G376600 Sobic004G130300 Sobic004G130300 Sobic001G532600--Sobic004G130300 Sobic007G017800 Sobic007G017800 Sobic001G532600--Sobic007G017800 Sobic007G125000 Sobic007G125000 Sobic001G532600--Sobic007G125000 Sobic001G014200 Sobic001G014200 Sobic001G532600--Sobic001G014200 Sobic002G181600 Sobic002G181600 Sobic001G532600--Sobic002G181600 Sobic010G041400 Sobic010G041400 Sobic001G532600--Sobic010G041400 Sobic010G154900 Sobic010G154900 Sobic001G532600--Sobic010G154900 Sobic009G192300 Sobic009G192300 Sobic001G532600--Sobic009G192300 Sobic002G376600--Sobic001G532600 Sobic004G120100 Sobic004G120100 Sobic002G376600--Sobic004G120100 Sobic006G222600 Sobic006G222600 Sobic002G376600--Sobic006G222600 Sobic002G376600--Sobic002G181600 Sobic001G198400 Sobic001G198400 Sobic002G376600--Sobic001G198400 Sobic002G098900 Sobic002G098900 Sobic002G376600--Sobic002G098900 Sobic004G163800 Sobic004G163800 Sobic002G376600--Sobic004G163800 Sobic001G136800 Sobic001G136800 Sobic002G376600--Sobic001G136800 Sobic002G335000 Sobic002G335000 Sobic002G376600--Sobic002G335000 Sobic004G130300--Sobic001G532600 Sobic003G241700 Sobic003G241700 Sobic004G130300--Sobic003G241700 Sobic004G130300--Sobic007G125000 Sobic010G204900 Sobic010G204900 Sobic004G130300--Sobic010G204900 Sobic004G130300--Sobic001G014200 Sobic006G039400 Sobic006G039400 Sobic004G130300--Sobic006G039400 Sobic001G405600 Sobic001G405600 Sobic004G130300--Sobic001G405600 Sobic003G311900 Sobic003G311900 Sobic004G130300--Sobic003G311900 Sobic005G023800 Sobic005G023800 Sobic004G130300--Sobic005G023800 Sobic007G017800--Sobic001G405600 Sobic002G103600 Sobic002G103600 Sobic007G017800--Sobic002G103600 Sobic003G143200 Sobic003G143200 Sobic007G017800--Sobic003G143200 Sobic004G185800 Sobic004G185800 Sobic007G017800--Sobic004G185800 Sobic010G034100 Sobic010G034100 Sobic007G017800--Sobic010G034100 Sobic008G162900 Sobic008G162900 Sobic007G017800--Sobic008G162900 Sobic009G177500 Sobic009G177500 Sobic007G017800--Sobic009G177500 Sobic006G234700 Sobic006G234700 Sobic007G017800--Sobic006G234700 Sobic008G063300 Sobic008G063300 Sobic007G017800--Sobic008G063300 Sobic007G218000 Sobic007G218000 Sobic007G125000--Sobic007G218000 Sobic002G112700 Sobic002G112700 Sobic007G125000--Sobic002G112700 Sobic009G092400 Sobic009G092400 Sobic007G125000--Sobic009G092400 Sobic007G132100 Sobic007G132100 Sobic007G125000--Sobic007G132100 Sobic007G125000--Sobic009G192300 Sobic002G164300 Sobic002G164300 Sobic007G125000--Sobic002G164300 Sobic007G008900 Sobic007G008900 Sobic007G125000--Sobic007G008900 Sobic009G126600 Sobic009G126600 Sobic007G125000--Sobic009G126600 Sobic004G072100 Sobic004G072100 Sobic007G125000--Sobic004G072100 Sobic007G087000 Sobic007G087000 Sobic001G014200--Sobic007G087000 Sobic001G014200--Sobic007G125000 Sobic002G079000 Sobic002G079000 Sobic001G014200--Sobic002G079000 Sobic004G198600 Sobic004G198600 Sobic001G014200--Sobic004G198600 Sobic002G355800 Sobic002G355800 Sobic001G014200--Sobic002G355800 Sobic001G014200--Sobic007G017800 Sobic001G484700 Sobic001G484700 Sobic001G014200--Sobic001G484700 Sobic001G014200--Sobic001G405600 Sobic010G068700 Sobic010G068700 Sobic001G014200--Sobic010G068700 Sobic006G274800 Sobic006G274800 Sobic002G181600--Sobic006G274800 Sobic003G354600 Sobic003G354600 Sobic002G181600--Sobic003G354600 Sobic002G181600--Sobic001G532600 Sobic002G181600--Sobic002G376600 Sobic008G087900 Sobic008G087900 Sobic002G181600--Sobic008G087900 Sobic002G181600--Sobic001G136800 Sobic002G181600--Sobic006G039400 Sobic004G033700 Sobic004G033700 Sobic002G181600--Sobic004G033700 Sobic002G181600--Sobic002G335000 Sobic003G407100 Sobic003G407100 Sobic010G041400--Sobic003G407100 Sobic010G041400--Sobic009G126600 Sobic010G041400--Sobic010G154900 Sobic010G041400--Sobic007G125000 Sobic010G041400--Sobic009G192300 Sobic010G041400--Sobic001G532600 Sobic009G126400 Sobic009G126400 Sobic010G041400--Sobic009G126400 Sobic010G140400 Sobic010G140400 Sobic010G041400--Sobic010G140400 Sobic010G098200 Sobic010G098200 Sobic010G041400--Sobic010G098200 Sobic010G154900--Sobic010G041400 Sobic010G154900--Sobic001G532600 Sobic010G154900--Sobic010G098200 Sobic006G217000 Sobic006G217000 Sobic010G154900--Sobic006G217000 Sobic010G154900--Sobic008G162900 Sobic001G166600 Sobic001G166600 Sobic010G154900--Sobic001G166600 Sobic010G154900--Sobic009G126400 Sobic009G092900 Sobic009G092900 Sobic010G154900--Sobic009G092900 Sobic008G090900 Sobic008G090900 Sobic010G154900--Sobic008G090900 Sobic004G096400 Sobic004G096400 Sobic009G192300--Sobic004G096400 Sobic009G192300--Sobic006G234700 Sobic010G059500 Sobic010G059500 Sobic009G192300--Sobic010G059500 Sobic009G192300--Sobic010G034100 Sobic009G084900 Sobic009G084900 Sobic009G192300--Sobic009G084900 Sobic003G444800 Sobic003G444800 Sobic009G192300--Sobic003G444800 Sobic002G260400 Sobic002G260400 Sobic009G192300--Sobic002G260400 SobicK028600 SobicK028600 Sobic009G192300--SobicK028600 Sobic009G192300--Sobic007G125000
Octagon: transcription factors


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