Gene annotation
Transcriptome id Sobic.001G053000.1
Synonym Sb01g004870
Functional annotation small multi-drug export protein, putative, expressed
UniProt C5WX31
Pfam PF06695
Panther DB PTHR36007 PTHR36007:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G02590 : -
RAP-DB (Rice) LOC_Os03g58620.1 : small multi-drug export protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G043800 stage II sporulation protein E, putative, expressed -
2 Sobic.010G277100 regulator of ribonuclease, putative, expressed -
3 Sobic.002G343400 tic20, putative, expressed -
4 Sobic.003G314500 expressed protein -
5 Sobic.007G062500 expressed protein -
6 Sobic.008G144800 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
7 Sobic.002G281800 expressed protein -
8 Sobic.001G417900 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
9 Sobic.010G140600 bolA, putative, expressed -
10 Sobic.003G110400 inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed -
11 Sobic.002G152600 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17790: mitochondrial import inner membrane translocase subunit TIM22
12 Sobic.006G160300 DNA binding protein, putative, expressed -
13 Sobic.010G269400 DNL zinc finger domain containing protein, putative, expressed -
14 Sobic.010G265300 AAA-type ATPase family protein, putative, expressed -
15 Sobic.008G076800 expressed protein -
16 Sobic.003G125400 Fe-S metabolism associated domain containing protein, expressed -
17 Sobic.007G046500 60S ribosomal protein L18a-1, putative, expressed -
18 Sobic.003G343400 sufB/sufD domain containing protein, putative, expressed -
19 Sobic.002G347000 WD domain, G-beta repeat domain containing protein, expressed K14963: WDR5, SWD3, COMPASS component SWD3
20 Sobic.006G199200 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14


Gene co-expression network
sample Sobic001G053000 Sobic001G053000 Sobic001G043800 Sobic001G043800 Sobic001G053000--Sobic001G043800 Sobic010G277100 Sobic010G277100 Sobic001G053000--Sobic010G277100 Sobic002G343400 Sobic002G343400 Sobic001G053000--Sobic002G343400 Sobic003G314500 Sobic003G314500 Sobic001G053000--Sobic003G314500 Sobic007G062500 Sobic007G062500 Sobic001G053000--Sobic007G062500 Sobic008G144800 Sobic008G144800 Sobic001G053000--Sobic008G144800 Sobic002G281800 Sobic002G281800 Sobic001G053000--Sobic002G281800 Sobic001G417900 Sobic001G417900 Sobic001G053000--Sobic001G417900 Sobic010G140600 Sobic010G140600 Sobic001G053000--Sobic010G140600 Sobic007G136800 Sobic007G136800 Sobic001G043800--Sobic007G136800 Sobic006G130800 Sobic006G130800 Sobic001G043800--Sobic006G130800 Sobic004G086700 Sobic004G086700 Sobic001G043800--Sobic004G086700 Sobic002G218500 Sobic002G218500 Sobic001G043800--Sobic002G218500 Sobic001G102500 Sobic001G102500 Sobic001G043800--Sobic001G102500 Sobic006G031800 Sobic006G031800 Sobic001G043800--Sobic006G031800 Sobic007G029700 Sobic007G029700 Sobic001G043800--Sobic007G029700 Sobic001G043800--Sobic001G053000 Sobic002G431300 Sobic002G431300 Sobic001G043800--Sobic002G431300 Sobic001G364600 Sobic001G364600 Sobic010G277100--Sobic001G364600 Sobic005G168600 Sobic005G168600 Sobic010G277100--Sobic005G168600 Sobic003G077900 Sobic003G077900 Sobic010G277100--Sobic003G077900 Sobic010G277100--Sobic001G417900 Sobic010G277100--Sobic001G053000 Sobic002G111200 Sobic002G111200 Sobic010G277100--Sobic002G111200 Sobic010G049100 Sobic010G049100 Sobic010G277100--Sobic010G049100 Sobic001G014800 Sobic001G014800 Sobic010G277100--Sobic001G014800 Sobic007G188300 Sobic007G188300 Sobic010G277100--Sobic007G188300 Sobic004G359100 Sobic004G359100 Sobic002G343400--Sobic004G359100 Sobic004G163800 Sobic004G163800 Sobic002G343400--Sobic004G163800 Sobic003G234900 Sobic003G234900 Sobic002G343400--Sobic003G234900 Sobic001G382800 Sobic001G382800 Sobic002G343400--Sobic001G382800 Sobic001G401700 Sobic001G401700 Sobic002G343400--Sobic001G401700 Sobic001G327800 Sobic001G327800 Sobic002G343400--Sobic001G327800 Sobic002G343400--Sobic002G431300 Sobic004G238900 Sobic004G238900 Sobic002G343400--Sobic004G238900 Sobic003G067100 Sobic003G067100 Sobic002G343400--Sobic003G067100 Sobic003G314500--Sobic001G053000 Sobic010G265800 Sobic010G265800 Sobic003G314500--Sobic010G265800 Sobic006G004600 Sobic006G004600 Sobic003G314500--Sobic006G004600 Sobic002G125900 Sobic002G125900 Sobic003G314500--Sobic002G125900 Sobic008G146900 Sobic008G146900 Sobic003G314500--Sobic008G146900 Sobic005G032300 Sobic005G032300 Sobic003G314500--Sobic005G032300 Sobic001G427500 Sobic001G427500 Sobic003G314500--Sobic001G427500 Sobic004G210900 Sobic004G210900 Sobic003G314500--Sobic004G210900 Sobic003G206800 Sobic003G206800 Sobic003G314500--Sobic003G206800 Sobic007G062500--Sobic001G043800 Sobic007G062500--Sobic001G427500 Sobic004G227300 Sobic004G227300 Sobic007G062500--Sobic004G227300 Sobic007G062500--Sobic004G086700 Sobic010G184600 Sobic010G184600 Sobic007G062500--Sobic010G184600 Sobic009G094800 Sobic009G094800 Sobic007G062500--Sobic009G094800 Sobic007G062500--Sobic001G053000 Sobic004G174400 Sobic004G174400 Sobic007G062500--Sobic004G174400 Sobic009G190800 Sobic009G190800 Sobic007G062500--Sobic009G190800 Sobic008G144800--Sobic010G140600 Sobic003G125400 Sobic003G125400 Sobic008G144800--Sobic003G125400 Sobic008G144800--Sobic008G146900 Sobic007G227700 Sobic007G227700 Sobic008G144800--Sobic007G227700 Sobic002G193100 Sobic002G193100 Sobic008G144800--Sobic002G193100 Sobic010G080300 Sobic010G080300 Sobic008G144800--Sobic010G080300 Sobic002G001000 Sobic002G001000 Sobic008G144800--Sobic002G001000 Sobic003G343400 Sobic003G343400 Sobic008G144800--Sobic003G343400 Sobic001G029200 Sobic001G029200 Sobic008G144800--Sobic001G029200 Sobic002G281800--Sobic010G080300 Sobic003G291400 Sobic003G291400 Sobic002G281800--Sobic003G291400 Sobic008G072700 Sobic008G072700 Sobic002G281800--Sobic008G072700 Sobic007G046500 Sobic007G046500 Sobic002G281800--Sobic007G046500 Sobic007G029100 Sobic007G029100 Sobic002G281800--Sobic007G029100 Sobic002G281800--Sobic009G190800 Sobic003G310100 Sobic003G310100 Sobic002G281800--Sobic003G310100 Sobic004G152100 Sobic004G152100 Sobic002G281800--Sobic004G152100 Sobic009G029700 Sobic009G029700 Sobic002G281800--Sobic009G029700 Sobic001G417900--Sobic003G077900 Sobic002G431600 Sobic002G431600 Sobic001G417900--Sobic002G431600 Sobic003G122500 Sobic003G122500 Sobic001G417900--Sobic003G122500 Sobic001G417900--Sobic010G277100 Sobic002G071000 Sobic002G071000 Sobic001G417900--Sobic002G071000 Sobic003G299000 Sobic003G299000 Sobic001G417900--Sobic003G299000 Sobic001G049500 Sobic001G049500 Sobic001G417900--Sobic001G049500 Sobic001G417900--Sobic001G427500 Sobic001G414500 Sobic001G414500 Sobic001G417900--Sobic001G414500 Sobic010G269400 Sobic010G269400 Sobic010G140600--Sobic010G269400 Sobic010G058200 Sobic010G058200 Sobic010G140600--Sobic010G058200 Sobic001G286600 Sobic001G286600 Sobic010G140600--Sobic001G286600 Sobic004G281900 Sobic004G281900 Sobic010G140600--Sobic004G281900 Sobic004G238200 Sobic004G238200 Sobic010G140600--Sobic004G238200 Sobic002G102200 Sobic002G102200 Sobic010G140600--Sobic002G102200 Sobic001G072700 Sobic001G072700 Sobic010G140600--Sobic001G072700 Sobic006G155500 Sobic006G155500 Sobic010G140600--Sobic006G155500 Sobic010G140600--Sobic008G144800
Octagon: transcription factors


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