Gene annotation
Transcriptome id Sobic.003G373500.1
Synonym Sb03g041400, FAB1A
Functional annotation phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed
UniProt C5XRB5
Pfam PF00118 PF01504
Panther DB PTHR11353 PTHR11353:SF87
NCBI CDD -
KEGG Orthology K00921; PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
Gene Ontology GO:0005524; ATP binding GO:0016307phosphatidylinositol phosphate kinase activity


Orthologs (automatic annotation)
TAIR AT4G33240 : 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion binding;1-phosphatidylinositol-3-phosphate 5-kinases
RAP-DB (Rice) LOC_Os12g13440.1 : phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed
MaizeGDB (Corn) Zm00025a026623
Brachypodium PNT73287 , KQK10843
Barley HORVU3Hr1G082080.22 , HORVU3Hr1G082080.23 , HORVU3Hr1G082080.20 , HORVU3Hr1G082080.21 , HORVU3Hr1G082080.26 , HORVU3Hr1G082080.27 , HORVU3Hr1G082080.24 , HORVU3Hr1G082080.10 , HORVU3Hr1G082080.31 , HORVU3Hr1G082080.30 , HORVU3Hr1G082080.32 , HORVU3Hr1G082080.9 , HORVU3Hr1G082080.8 , HORVU3Hr1G082080.3 , HORVU3Hr1G082080.2 , HORVU3Hr1G082080.1 , HORVU3Hr1G082080.7 , HORVU3Hr1G082080.6 , HORVU3Hr1G082080.5 , HORVU3Hr1G082080.4 , HORVU3Hr1G082080.25 , HORVU3Hr1G082080.28 , HORVU3Hr1G082080.29 , HORVU3Hr1G082080.19 , HORVU3Hr1G082080.18 , HORVU3Hr1G082080.13 , HORVU3Hr1G082080.12 , HORVU3Hr1G082080.11 , HORVU3Hr1G082080.17 , HORVU3Hr1G082080.16 , HORVU3Hr1G082080.15 , HORVU3Hr1G082080.14
Wheat TraesCS3A02G385500 , TraesCS3A02G385500 , TraesCS3A02G385500 , TraesCS3A02G385500 , TraesCS3A02G385500 , TraesCS3A02G385500 , TraesCS3A02G385500 , TraesCS3A02G385500 , TraesCS3D02G378500 , TraesCS3D02G378500 , TraesCS3D02G378500 , TraesCS3D02G378500 , TraesCS3D02G378500 , TraesCS3D02G378500 , TraesCS3D02G378500 , TraesCS3D02G378500 , TraesCS3D02G378500 , TraesCS3B02G417700 , TraesCS3B02G417700 , TraesCS3B02G417700 , TraesCS3B02G417700 , TraesCS3B02G417700 , TraesCS3B02G417700 , TraesCS3B02G417700 , TraesCS3A02G385500
Populus -


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cDNA sequences
Sobic.003G373500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G264100 - K10843: ERCC3, DNA excision repair protein ERCC-3
2 Sobic.003G107500 expressed protein K10841: ERCC6, CSB, DNA excision repair protein ERCC-6
3 Sobic.002G335000 UPF0041 domain containing protein, putative, expressed -
4 Sobic.001G333100 U-box domain-containing protein, putative, expressed K10597: UBE4B, ubiquitin conjugation factor E4 B
5 Sobic.004G252900 transcription factor IIA large subunit, putative, expressed K03122: TFIIA1, GTF2A1, transcription initiation factor TFIIA large subunit
6 Sobic.003G311900 CK1_CaseinKinase_1a.3 - CK1 includes the casein kinase 1 kinases, expressed -
7 Sobic.010G239900 "Causal gene for dwf1-1 with poor pollen viability and dwarfed growth form, "(PubMedID : 26198258)@2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein(PubMedID : 28640841)@oxidoreductase, putative, expressed -
8 Sobic.002G311100 zinc finger, C3HC4 type domain containing protein, expressed -
9 Sobic.010G226000 expressed protein -
10 Sobic.002G358400 eukaryotic peptide chain release factor subunit 1-1, putative, expressed K03265: ETF1, peptide chain release factor subunit 1
11 Sobic.009G201300 - -
12 Sobic.001G446850 - -
13 Sobic.002G047700 CK1_CaseinKinase_1a.6 - CK1 includes the casein kinase 1 kinases, expressed -
14 Sobic.010G275400 expressed protein -
15 Sobic.003G354600 csAtPR5, putative, expressed -
16 Sobic.010G131900 Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed K15687: E3 ubiquitin-protein ligase makorin
17 Sobic.004G001500 HECT-domain domain containing protein, expressed K10590: E3 ubiquitin-protein ligase TRIP12
18 Sobic.002G383600 zinc finger, C3HC4 type domain containing protein, expressed K12169: KPC1, Kip1 ubiquitination-promoting complex protein 1
19 Sobic.001G136800 dual specificity protein phosphatase, putative, expressed -
20 Sobic.001G095000 CorA-like magnesium transporter protein, putative, expressed K16075: MRS2, magnesium transporter


Gene co-expression network
sample Sobic003G373500 Sobic003G373500 Sobic003G264100 Sobic003G264100 Sobic003G373500--Sobic003G264100 Sobic003G107500 Sobic003G107500 Sobic003G373500--Sobic003G107500 Sobic002G335000 Sobic002G335000 Sobic003G373500--Sobic002G335000 Sobic001G333100 Sobic001G333100 Sobic003G373500--Sobic001G333100 Sobic004G252900 Sobic004G252900 Sobic003G373500--Sobic004G252900 Sobic003G311900 Sobic003G311900 Sobic003G373500--Sobic003G311900 Sobic010G239900 Sobic010G239900 Sobic003G373500--Sobic010G239900 Sobic002G311100 Sobic002G311100 Sobic003G373500--Sobic002G311100 Sobic010G226000 Sobic010G226000 Sobic003G373500--Sobic010G226000 Sobic003G264100--Sobic001G333100 Sobic009G109925 Sobic009G109925 Sobic003G264100--Sobic009G109925 Sobic006G196300 Sobic006G196300 Sobic003G264100--Sobic006G196300 Sobic003G264100--Sobic002G311100 Sobic006G180000 Sobic006G180000 Sobic003G264100--Sobic006G180000 Sobic009G068500 Sobic009G068500 Sobic003G264100--Sobic009G068500 Sobic001G227400 Sobic001G227400 Sobic003G264100--Sobic001G227400 Sobic001G192000 Sobic001G192000 Sobic003G264100--Sobic001G192000 Sobic003G195000 Sobic003G195000 Sobic003G264100--Sobic003G195000 Sobic004G001500 Sobic004G001500 Sobic003G107500--Sobic004G001500 Sobic002G043800 Sobic002G043800 Sobic003G107500--Sobic002G043800 Sobic002G383600 Sobic002G383600 Sobic003G107500--Sobic002G383600 Sobic001G310100 Sobic001G310100 Sobic003G107500--Sobic001G310100 Sobic004G146600 Sobic004G146600 Sobic003G107500--Sobic004G146600 Sobic003G298200 Sobic003G298200 Sobic003G107500--Sobic003G298200 Sobic003G107500--Sobic003G373500 Sobic005G187300 Sobic005G187300 Sobic003G107500--Sobic005G187300 Sobic010G014100 Sobic010G014100 Sobic003G107500--Sobic010G014100 Sobic004G033700 Sobic004G033700 Sobic002G335000--Sobic004G033700 Sobic003G354600 Sobic003G354600 Sobic002G335000--Sobic003G354600 Sobic010G210500 Sobic010G210500 Sobic002G335000--Sobic010G210500 Sobic001G136800 Sobic001G136800 Sobic002G335000--Sobic001G136800 Sobic002G335000--Sobic003G373500 Sobic006G274800 Sobic006G274800 Sobic002G335000--Sobic006G274800 Sobic004G054100 Sobic004G054100 Sobic002G335000--Sobic004G054100 Sobic002G181600 Sobic002G181600 Sobic002G335000--Sobic002G181600 Sobic002G376600 Sobic002G376600 Sobic002G335000--Sobic002G376600 Sobic001G333100--Sobic003G264100 Sobic002G020700 Sobic002G020700 Sobic001G333100--Sobic002G020700 Sobic003G221400 Sobic003G221400 Sobic001G333100--Sobic003G221400 Sobic001G333100--Sobic001G192000 Sobic010G020400 Sobic010G020400 Sobic001G333100--Sobic010G020400 Sobic002G142900 Sobic002G142900 Sobic001G333100--Sobic002G142900 Sobic010G223300 Sobic010G223300 Sobic001G333100--Sobic010G223300 Sobic001G251100 Sobic001G251100 Sobic001G333100--Sobic001G251100 Sobic008G033500 Sobic008G033500 Sobic001G333100--Sobic008G033500 Sobic004G252900--Sobic006G196300 Sobic002G185900 Sobic002G185900 Sobic004G252900--Sobic002G185900 Sobic004G252900--Sobic003G264100 Sobic002G117400 Sobic002G117400 Sobic004G252900--Sobic002G117400 Sobic003G379200 Sobic003G379200 Sobic004G252900--Sobic003G379200 Sobic010G275400 Sobic010G275400 Sobic004G252900--Sobic010G275400 Sobic006G039400 Sobic006G039400 Sobic004G252900--Sobic006G039400 Sobic004G028100 Sobic004G028100 Sobic004G252900--Sobic004G028100 Sobic001G019800 Sobic001G019800 Sobic004G252900--Sobic001G019800 Sobic004G244900 Sobic004G244900 Sobic003G311900--Sobic004G244900 Sobic003G311900--Sobic003G264100 Sobic002G167500 Sobic002G167500 Sobic003G311900--Sobic002G167500 Sobic003G311900--Sobic001G192000 Sobic002G275700 Sobic002G275700 Sobic003G311900--Sobic002G275700 Sobic003G311900--Sobic004G001500 Sobic005G026000 Sobic005G026000 Sobic003G311900--Sobic005G026000 Sobic001G355800 Sobic001G355800 Sobic003G311900--Sobic001G355800 Sobic003G311900--Sobic001G136800 Sobic010G239900--Sobic003G264100 Sobic003G433200 Sobic003G433200 Sobic010G239900--Sobic003G433200 Sobic010G239900--Sobic004G244900 Sobic001G457800 Sobic001G457800 Sobic010G239900--Sobic001G457800 Sobic003G119600 Sobic003G119600 Sobic010G239900--Sobic003G119600 Sobic002G325300 Sobic002G325300 Sobic010G239900--Sobic002G325300 Sobic010G239900--Sobic003G311900 Sobic009G201300 Sobic009G201300 Sobic010G239900--Sobic009G201300 Sobic010G239900--Sobic001G333100 Sobic010G147100 Sobic010G147100 Sobic002G311100--Sobic010G147100 Sobic009G074400 Sobic009G074400 Sobic002G311100--Sobic009G074400 Sobic010G013200 Sobic010G013200 Sobic002G311100--Sobic010G013200 Sobic002G311100--Sobic003G264100 Sobic010G131900 Sobic010G131900 Sobic002G311100--Sobic010G131900 Sobic010G074300 Sobic010G074300 Sobic002G311100--Sobic010G074300 Sobic009G143700 Sobic009G143700 Sobic002G311100--Sobic009G143700 Sobic002G311100--Sobic009G201300 Sobic002G311100--Sobic003G195000 Sobic001G451400 Sobic001G451400 Sobic010G226000--Sobic001G451400 Sobic009G256400 Sobic009G256400 Sobic010G226000--Sobic009G256400 Sobic004G209700 Sobic004G209700 Sobic010G226000--Sobic004G209700 Sobic009G165700 Sobic009G165700 Sobic010G226000--Sobic009G165700 Sobic003G166750 Sobic003G166750 Sobic010G226000--Sobic003G166750 Sobic001G441400 Sobic001G441400 Sobic010G226000--Sobic001G441400 Sobic010G226000--Sobic001G457800 Sobic001G111850 Sobic001G111850 Sobic010G226000--Sobic001G111850 Sobic003G444800 Sobic003G444800 Sobic010G226000--Sobic003G444800
Octagon: transcription factors


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