Gene annotation
Transcriptome id Sobic.008G156700.1
Synonym Sb08g020570
Functional annotation phosphoribulokinase/Uridine kinase family protein, expressed
UniProt A0A1B6PDZ3
Pfam PF00485
Panther DB PTHR10285 PTHR10285:SF81
NCBI CDD KOG2702; Predicted panthothenate kinase/uridine kinase-related protein
KEGG Orthology -
Gene Ontology GO:0016301; kinase activity GO:0008152metabolic process GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT1G03030 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os12g40880.1 : phosphoribulokinase/Uridine kinase family protein, expressed
MaizeGDB (Corn) Zm00025a025288
Brachypodium PNT62402 , KQJ85962
Barley HORVU5Hr1G014310.14 , HORVU5Hr1G014310.15 , HORVU5Hr1G014310.16 , HORVU5Hr1G014310.10 , HORVU5Hr1G014310.11 , HORVU5Hr1G014310.12 , HORVU5Hr1G014310.13 , HORVU5Hr1G014310.6 , HORVU5Hr1G014310.7 , HORVU5Hr1G014310.4 , HORVU5Hr1G014310.5 , HORVU5Hr1G014310.2 , HORVU5Hr1G014310.3 , HORVU5Hr1G014310.8 , HORVU5Hr1G014310.9
Wheat TraesCS5B02G058400 , TraesCS5B02G058400 , TraesCS5D02G069400 , TraesCS5A02G058500 , TraesCS5A02G058500 , TraesCS5A02G058500
Populus -


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cDNA sequences
Sobic.008G156700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G098200 - -
2 Sobic.008G032600 saposin-like type B, region 1 family protein, putative, expressed K12382: PSAP, saposin
3 Sobic.002G364800 COBW domain containing protein, putative, expressed -
4 Sobic.004G310500 ybaK/prolyl-tRNA synthetase family protein, putative, expressed -
5 Sobic.009G075800 serine/threonine protein phosphatase 5, putative, expressed K04460: serine/threonine-protein phosphatase 5
6 Sobic.008G033500 nucleolar GTPase, putative, expressed -
7 Sobic.006G136400 eukaryotic initiation factor iso-4F subunit p82-34, putative, expressed K03260: translation initiation factor 4G
8 Sobic.002G262900 farnesyltransferase/geranylgeranyltransferase type-1 subunitalpha, putative, expressed K05955: protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
9 Sobic.002G226900 zinc-binding alcohol dehydrogenase domain-containing protein 2, putative, expressed K07119: PTGR3, prostaglandin reductase 3
10 Sobic.002G231500 phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplast precursor, putative, expressed K01923: phosphoribosylaminoimidazole-succinocarboxamide synthase
11 Sobic.003G012200 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
12 Sobic.002G263600 expressed protein -
13 Sobic.004G296400 amino acid permease, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family
14 Sobic.001G199100 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
15 Sobic.003G422900 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
16 Sobic.002G116900 expressed protein -
17 Sobic.009G056200 arginyl-tRNA synthetase, putative, expressed K01887: RARS, arginyl-tRNA synthetase
18 Sobic.004G040900 CPuORF14 - conserved peptide uORF-containing transcript, expressed K03262: translation initiation factor 5
19 Sobic.002G111200 dehydrogenase/reductase SDR family member 2, putative, expressed K11147: dehydrogenase/reductase SDR family member 4
20 Sobic.008G089100 armadillo/beta-catenin repeat family protein, putative, expressed -


Gene co-expression network
sample Sobic008G156700 Sobic008G156700 Sobic007G098200 Sobic007G098200 Sobic008G156700--Sobic007G098200 Sobic008G032600 Sobic008G032600 Sobic008G156700--Sobic008G032600 Sobic002G364800 Sobic002G364800 Sobic008G156700--Sobic002G364800 Sobic004G310500 Sobic004G310500 Sobic008G156700--Sobic004G310500 Sobic009G075800 Sobic009G075800 Sobic008G156700--Sobic009G075800 Sobic008G033500 Sobic008G033500 Sobic008G156700--Sobic008G033500 Sobic006G136400 Sobic006G136400 Sobic008G156700--Sobic006G136400 Sobic002G262900 Sobic002G262900 Sobic008G156700--Sobic002G262900 Sobic002G226900 Sobic002G226900 Sobic008G156700--Sobic002G226900 Sobic007G098200--Sobic008G156700 Sobic001G199100 Sobic001G199100 Sobic007G098200--Sobic001G199100 Sobic007G098200--Sobic002G226900 Sobic003G012200 Sobic003G012200 Sobic007G098200--Sobic003G012200 Sobic007G098200--Sobic009G075800 Sobic001G047400 Sobic001G047400 Sobic007G098200--Sobic001G047400 Sobic004G212200 Sobic004G212200 Sobic007G098200--Sobic004G212200 Sobic002G393500 Sobic002G393500 Sobic007G098200--Sobic002G393500 Sobic004G275700 Sobic004G275700 Sobic007G098200--Sobic004G275700 Sobic010G049100 Sobic010G049100 Sobic008G032600--Sobic010G049100 Sobic008G032600--Sobic008G156700 Sobic004G080100 Sobic004G080100 Sobic008G032600--Sobic004G080100 Sobic009G133600 Sobic009G133600 Sobic008G032600--Sobic009G133600 Sobic005G168600 Sobic005G168600 Sobic008G032600--Sobic005G168600 Sobic003G110400 Sobic003G110400 Sobic008G032600--Sobic003G110400 Sobic003G055700 Sobic003G055700 Sobic008G032600--Sobic003G055700 Sobic006G244700 Sobic006G244700 Sobic008G032600--Sobic006G244700 Sobic008G032600--Sobic008G033500 Sobic002G364800--Sobic001G199100 Sobic002G364800--Sobic008G156700 Sobic008G186200 Sobic008G186200 Sobic002G364800--Sobic008G186200 Sobic002G364800--Sobic006G136400 Sobic009G056200 Sobic009G056200 Sobic002G364800--Sobic009G056200 Sobic003G195000 Sobic003G195000 Sobic002G364800--Sobic003G195000 Sobic006G196300 Sobic006G196300 Sobic002G364800--Sobic006G196300 Sobic007G071900 Sobic007G071900 Sobic002G364800--Sobic007G071900 Sobic002G263600 Sobic002G263600 Sobic002G364800--Sobic002G263600 Sobic004G194900 Sobic004G194900 Sobic004G310500--Sobic004G194900 Sobic004G310500--Sobic009G075800 Sobic006G044600 Sobic006G044600 Sobic004G310500--Sobic006G044600 Sobic001G283200 Sobic001G283200 Sobic004G310500--Sobic001G283200 Sobic009G257600 Sobic009G257600 Sobic004G310500--Sobic009G257600 Sobic004G310500--Sobic008G156700 Sobic001G512300 Sobic001G512300 Sobic004G310500--Sobic001G512300 Sobic002G394600 Sobic002G394600 Sobic004G310500--Sobic002G394600 Sobic009G222500 Sobic009G222500 Sobic004G310500--Sobic009G222500 Sobic009G075800--Sobic009G222500 Sobic009G075800--Sobic004G275700 Sobic010G020400 Sobic010G020400 Sobic009G075800--Sobic010G020400 Sobic009G075800--Sobic001G199100 Sobic008G004600 Sobic008G004600 Sobic009G075800--Sobic008G004600 Sobic009G075800--Sobic003G012200 Sobic009G075800--Sobic006G136400 Sobic001G392300 Sobic001G392300 Sobic009G075800--Sobic001G392300 Sobic009G075800--Sobic007G071900 Sobic008G033500--Sobic010G020400 Sobic001G014800 Sobic001G014800 Sobic008G033500--Sobic001G014800 Sobic001G333100 Sobic001G333100 Sobic008G033500--Sobic001G333100 Sobic002G020700 Sobic002G020700 Sobic008G033500--Sobic002G020700 Sobic007G162100 Sobic007G162100 Sobic008G033500--Sobic007G162100 Sobic006G127600 Sobic006G127600 Sobic008G033500--Sobic006G127600 Sobic003G422900 Sobic003G422900 Sobic008G033500--Sobic003G422900 Sobic009G068500 Sobic009G068500 Sobic008G033500--Sobic009G068500 Sobic001G193300 Sobic001G193300 Sobic008G033500--Sobic001G193300 Sobic006G136400--Sobic008G004600 Sobic004G178200 Sobic004G178200 Sobic006G136400--Sobic004G178200 Sobic006G208500 Sobic006G208500 Sobic006G136400--Sobic006G208500 Sobic004G131300 Sobic004G131300 Sobic006G136400--Sobic004G131300 Sobic004G039600 Sobic004G039600 Sobic006G136400--Sobic004G039600 Sobic006G126100 Sobic006G126100 Sobic006G136400--Sobic006G126100 Sobic006G136400--Sobic002G262900 Sobic001G447300 Sobic001G447300 Sobic006G136400--Sobic001G447300 Sobic002G142900 Sobic002G142900 Sobic006G136400--Sobic002G142900 Sobic002G008800 Sobic002G008800 Sobic002G262900--Sobic002G008800 Sobic002G262900--Sobic004G275700 Sobic010G164000 Sobic010G164000 Sobic002G262900--Sobic010G164000 Sobic002G262900--Sobic006G136400 Sobic002G262900--Sobic004G039600 Sobic010G205800 Sobic010G205800 Sobic002G262900--Sobic010G205800 Sobic010G261600 Sobic010G261600 Sobic002G262900--Sobic010G261600 Sobic003G155900 Sobic003G155900 Sobic002G262900--Sobic003G155900 Sobic001G124200 Sobic001G124200 Sobic002G262900--Sobic001G124200 Sobic002G226900--Sobic009G075800 Sobic002G226900--Sobic004G275700 Sobic002G226900--Sobic003G012200 Sobic002G226900--Sobic001G199100 Sobic009G217100 Sobic009G217100 Sobic002G226900--Sobic009G217100 Sobic003G365300 Sobic003G365300 Sobic002G226900--Sobic003G365300 Sobic010G251000 Sobic010G251000 Sobic002G226900--Sobic010G251000 Sobic010G000900 Sobic010G000900 Sobic002G226900--Sobic010G000900 Sobic001G203900 Sobic001G203900 Sobic002G226900--Sobic001G203900
Octagon: transcription factors


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