Gene annotation
Transcriptome id Sobic.006G213400.2
Synonym Sb06g028370
Functional annotation bifunctional purine biosynthesis protein purH, putative, expressed
UniProt C5YFQ0
Pfam PF02142 PF01808
Panther DB PTHR11692
NCBI CDD -
KEGG Orthology K00602; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase
Gene Ontology GO:0006164; purine nucleotide biosynthetic process GO:0004643phosphoribosylaminoimidazolecarboxamide formyltransferase activity GO:0003937IMP cyclohydrolase activity


Orthologs (automatic annotation)
TAIR AT2G35040 : AICARFT/IMPCHase bienzyme family protein
RAP-DB (Rice) LOC_Os08g10570.2 : bifunctional purine biosynthesis protein purH, putative, expressed
MaizeGDB (Corn) Zm00025a054857 , Zm00025a009811
Brachypodium KQJ89323 , PNT66870 , KQJ95570 , KQJ95571 , PNT66869
Barley HORVU3Hr1G098870.9 , HORVU3Hr1G098870.8 , HORVU3Hr1G098870.5 , HORVU3Hr1G098870.4 , HORVU3Hr1G098870.7 , HORVU3Hr1G098870.6 , HORVU3Hr1G098870.1 , HORVU3Hr1G098870.3 , HORVU3Hr1G098870.2 , HORVU3Hr1G098870.10
Wheat TraesCS1A02G288300 , TraesCS1A02G288300 , TraesCS1A02G288300 , TraesCS1D02G287300 , TraesCS1D02G287300 , TraesCS1D02G287300 , TraesCS1D02G287300 , TraesCS3B02G499300 , TraesCS3B02G499300 , TraesCS3A02G459600 , TraesCS3D02G452400 , TraesCS3D02G452400 , TraesCS3D02G452400 , TraesCS3A02G459600 , TraesCS1B02G297700 , TraesCS1B02G297700 , TraesCS1B02G297700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G231500 phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplast precursor, putative, expressed K01923: phosphoribosylaminoimidazole-succinocarboxamide synthase
2 Sobic.008G190100 acetyl-CoA acetyltransferase, cytosolic, putative, expressed K00626: ACAT, acetyl-CoA C-acetyltransferase
3 Sobic.007G071900 GTP-binding protein, putative, expressed K06942: ribosome-binding ATPase
4 Sobic.006G043700 3-oxoacyl-reductase, chloroplast precursor, putative, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
5 Sobic.008G088857 - -
6 Sobic.009G072000 phosphoribosylformylglycinamidine synthase, putative, expressed K01933: phosphoribosylformylglycinamidine cyclo-ligase
7 Sobic.009G249800 AARP2CN domain containing protein, expressed K14799: pre-rRNA-processing protein TSR1
8 Sobic.006G010400 tRNA-dihydrouridine synthase 3-like, putative, expressed K05544: tRNA-dihydrouridine synthase 3
9 Sobic.004G275600 hydrolase, putative, expressed K01438: acetylornithine deacetylase
10 Sobic.003G165101 - K12876: RBM8A, RNA-binding protein 8A
11 Sobic.003G309300 radical SAM enzyme, putative, expressed K03644: lipA, LIAS, LIP1, lipoyl synthase
12 Sobic.004G310500 ybaK/prolyl-tRNA synthetase family protein, putative, expressed -
13 Sobic.001G486700 adenylosuccinate synthetase, chloroplast precursor, putative, expressed K01939: purA, adenylosuccinate synthase
14 Sobic.006G035500 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
15 Sobic.002G375800 -(PubMedID : 26976818)@aminotransferase, classes I and II, domain containing protein, expressed K00814: GPT, alanine transaminase
16 Sobic.006G084000 CDK5RAP1, putative, expressed K15865: threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1
17 Sobic.006G247900 phosphoribosylformylglycinamidine synthase, putative, expressed K01952: PFAS, phosphoribosylformylglycinamidine synthase
18 Sobic.001G537500 GTP-binding protein, putative, expressed K06944: uncharacterized protein
19 Sobic.008G088851 - -
20 Sobic.002G073700 cycloartenol-C-24-methyltransferase 1, putative, expressed K00559: SMT1, sterol 24-C-methyltransferase


Gene co-expression network
sample Sobic006G213400 Sobic006G213400 Sobic002G231500 Sobic002G231500 Sobic006G213400--Sobic002G231500 Sobic008G190100 Sobic008G190100 Sobic006G213400--Sobic008G190100 Sobic007G071900 Sobic007G071900 Sobic006G213400--Sobic007G071900 Sobic006G043700 Sobic006G043700 Sobic006G213400--Sobic006G043700 Sobic008G088857 Sobic008G088857 Sobic006G213400--Sobic008G088857 Sobic009G072000 Sobic009G072000 Sobic006G213400--Sobic009G072000 Sobic009G249800 Sobic009G249800 Sobic006G213400--Sobic009G249800 Sobic006G010400 Sobic006G010400 Sobic006G213400--Sobic006G010400 Sobic004G275600 Sobic004G275600 Sobic006G213400--Sobic004G275600 Sobic002G231500--Sobic007G071900 Sobic002G231500--Sobic006G213400 Sobic001G382600 Sobic001G382600 Sobic002G231500--Sobic001G382600 Sobic004G310500 Sobic004G310500 Sobic002G231500--Sobic004G310500 Sobic001G447300 Sobic001G447300 Sobic002G231500--Sobic001G447300 Sobic002G020700 Sobic002G020700 Sobic002G231500--Sobic002G020700 Sobic008G156700 Sobic008G156700 Sobic002G231500--Sobic008G156700 Sobic008G055900 Sobic008G055900 Sobic002G231500--Sobic008G055900 Sobic008G033500 Sobic008G033500 Sobic002G231500--Sobic008G033500 Sobic008G190100--Sobic006G213400 Sobic004G060100 Sobic004G060100 Sobic008G190100--Sobic004G060100 Sobic006G147600 Sobic006G147600 Sobic008G190100--Sobic006G147600 Sobic008G190100--Sobic002G231500 Sobic008G190100--Sobic004G275600 Sobic002G375800 Sobic002G375800 Sobic008G190100--Sobic002G375800 Sobic007G161200 Sobic007G161200 Sobic008G190100--Sobic007G161200 Sobic002G073700 Sobic002G073700 Sobic008G190100--Sobic002G073700 Sobic006G237000 Sobic006G237000 Sobic008G190100--Sobic006G237000 Sobic007G071900--Sobic002G231500 Sobic009G075800 Sobic009G075800 Sobic007G071900--Sobic009G075800 Sobic001G434200 Sobic001G434200 Sobic007G071900--Sobic001G434200 Sobic001G455800 Sobic001G455800 Sobic007G071900--Sobic001G455800 Sobic007G071900--Sobic002G020700 Sobic004G257100 Sobic004G257100 Sobic007G071900--Sobic004G257100 Sobic001G333100 Sobic001G333100 Sobic007G071900--Sobic001G333100 Sobic003G221400 Sobic003G221400 Sobic007G071900--Sobic003G221400 Sobic003G375200 Sobic003G375200 Sobic007G071900--Sobic003G375200 Sobic009G052200 Sobic009G052200 Sobic006G043700--Sobic009G052200 Sobic002G144275 Sobic002G144275 Sobic006G043700--Sobic002G144275 Sobic006G043700--Sobic006G213400 Sobic004G326600 Sobic004G326600 Sobic006G043700--Sobic004G326600 Sobic004G047200 Sobic004G047200 Sobic006G043700--Sobic004G047200 Sobic005G163700 Sobic005G163700 Sobic006G043700--Sobic005G163700 Sobic003G165101 Sobic003G165101 Sobic006G043700--Sobic003G165101 Sobic010G169700 Sobic010G169700 Sobic006G043700--Sobic010G169700 Sobic007G092200 Sobic007G092200 Sobic006G043700--Sobic007G092200 Sobic008G088851 Sobic008G088851 Sobic008G088857--Sobic008G088851 Sobic002G009300 Sobic002G009300 Sobic008G088857--Sobic002G009300 Sobic009G139900 Sobic009G139900 Sobic008G088857--Sobic009G139900 Sobic004G127700 Sobic004G127700 Sobic008G088857--Sobic004G127700 Sobic001G404600 Sobic001G404600 Sobic008G088857--Sobic001G404600 Sobic008G088857--Sobic006G213400 Sobic008G088857--Sobic007G071900 Sobic006G247900 Sobic006G247900 Sobic008G088857--Sobic006G247900 Sobic010G080700 Sobic010G080700 Sobic008G088857--Sobic010G080700 Sobic006G157000 Sobic006G157000 Sobic009G072000--Sobic006G157000 Sobic001G468600 Sobic001G468600 Sobic009G072000--Sobic001G468600 Sobic003G216500 Sobic003G216500 Sobic009G072000--Sobic003G216500 Sobic001G486700 Sobic001G486700 Sobic009G072000--Sobic001G486700 Sobic006G002201 Sobic006G002201 Sobic009G072000--Sobic006G002201 Sobic009G072000--Sobic004G275600 Sobic005G105500 Sobic005G105500 Sobic009G072000--Sobic005G105500 Sobic003G309300 Sobic003G309300 Sobic009G072000--Sobic003G309300 Sobic009G072000--Sobic006G213400 Sobic002G408900 Sobic002G408900 Sobic009G249800--Sobic002G408900 Sobic004G208500 Sobic004G208500 Sobic009G249800--Sobic004G208500 Sobic001G251600 Sobic001G251600 Sobic009G249800--Sobic001G251600 Sobic002G246700 Sobic002G246700 Sobic009G249800--Sobic002G246700 Sobic002G295900 Sobic002G295900 Sobic009G249800--Sobic002G295900 Sobic009G249800--Sobic006G010400 Sobic001G015400 Sobic001G015400 Sobic009G249800--Sobic001G015400 Sobic001G460500 Sobic001G460500 Sobic009G249800--Sobic001G460500 Sobic004G256000 Sobic004G256000 Sobic009G249800--Sobic004G256000 Sobic006G010400--Sobic001G251600 Sobic006G084000 Sobic006G084000 Sobic006G010400--Sobic006G084000 Sobic006G010400--Sobic007G071900 Sobic001G537500 Sobic001G537500 Sobic006G010400--Sobic001G537500 Sobic006G010400--Sobic009G249800 Sobic007G140400 Sobic007G140400 Sobic006G010400--Sobic007G140400 Sobic008G051200 Sobic008G051200 Sobic006G010400--Sobic008G051200 Sobic006G010400--Sobic004G257100 Sobic006G010400--Sobic001G460500 Sobic004G275600--Sobic003G309300 Sobic004G275600--Sobic003G165101 Sobic004G275600--Sobic001G537500 Sobic009G124000 Sobic009G124000 Sobic004G275600--Sobic009G124000 Sobic006G073200 Sobic006G073200 Sobic004G275600--Sobic006G073200 Sobic004G275600--Sobic007G071900 Sobic003G420900 Sobic003G420900 Sobic004G275600--Sobic003G420900 Sobic008G067100 Sobic008G067100 Sobic004G275600--Sobic008G067100 Sobic004G275600--Sobic004G257100
Octagon: transcription factors


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